Micropterus salmoides (largemouth bass): 119897109
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Entry
119897109 CDS
T07309
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A isoform X1
KO
K12876
RNA-binding protein 8A
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03013
Nucleocytoplasmic transport
msam03015
mRNA surveillance pathway
msam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119897109 (rbm8a)
09122 Translation
03013 Nucleocytoplasmic transport
119897109 (rbm8a)
03015 mRNA surveillance pathway
119897109 (rbm8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119897109 (rbm8a)
03041 Spliceosome [BR:
msam03041
]
119897109 (rbm8a)
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119897109 (rbm8a)
Spliceosome [BR:
msam03041
]
Complex C
Other components
EJC/TREX
119897109 (rbm8a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
119897109
NCBI-ProteinID:
XP_038566603
LinkDB
All DBs
Position
Unknown
AA seq
175 aa
AA seq
DB search
MADVLDLHEAGGEDFPMDEDGDESIHKLKEKAKKRKGRGFGSEEGARSRIKEDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFSEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNGQDMMGQPISVDWGFVRGPPKNKRRTGGRRRSRSPDRRRR
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtactggaccttcatgaagcgggaggcgaggactttcctatggatgaggat
ggtgatgaaagcatccataagttgaaggagaaagccaagaagaggaaaggacgcggcttt
ggctcagaggaaggagccaggtccagaatcaaagaggactatgatactgtggaacaggac
ggggatgagccaggtcctcagagatcggtggagggctggatcctgtttgtgacaggtgta
catgaagaggccacagaggaagacatccatgacaagttttctgagtttggagaaatcaag
aacctgcatctcaatcttgaccgcagaacaggctacctcaagggatatgcactggtggag
tatgagacatacaaagaggcccaggcagccatggaagggctcaacggtcaggatatgatg
ggccagcctatcagtgttgactgggggtttgtcagagggccccccaagaacaagaggagg
actggtggacggaggcgcagcagaagtccggacaggaggcggcgttga
DBGET
integrated database retrieval system
