Micropterus salmoides (largemouth bass): 119897383
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Entry
119897383 CDS
T07309
Symbol
cicb
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119897383 (cicb)
Transcription factors [BR:
msam03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
119897383 (cicb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
119897383
NCBI-ProteinID:
XP_038566964
LinkDB
All DBs
Position
Unknown
AA seq
2739 aa
AA seq
DB search
MRPLKKHKGRSPPLTRGRGGRRRGGSQPLQQKDPKRVKKETLIKTTQHTPSIPSTRKQTP
STATNSNEESITNSNTPTSEQSAELRKPVESVEKDGKKEEEKTEKEKIMIVGTNVVVSAT
DTVAIPTSAPGPLSTATPPLATNHSPSLGSVSSRKTATFKARVPKKKYTYEHFANNASAL
ITMPTSNSALIQNSYCNIKSKISESVNMPNNNFKSSNNISNSINKSINLSINSGNNNITS
GINNPTNSSNSSAGSHSSFINSSNSRSNNCSGNQPSVLTVDSKATEANNFVSTEDRALRT
ADSQEKDSQSGENESELAPNSVRSSSTDTASEHSADLDVMEATGPSLHQKNSHITASLHN
LHPKEASLSEGLAEALAKGMKNQRVLARQIKRTIESGVGATGVRRVKETNSCPFSPVFRP
GVVRRVSGGTVDVQLHGEETLVKYPFHGGTVMTSSLGTESTVEFILDAPPPGMAPVAVGT
RVCVPYGGEEGGPLLYREGIVTQVDPHPGVSFPYQVLLSEDRKTLDDGGVGEEKEKRKAN
AHAVWVSRQSLRLLTPPWEVSHLDGGRAKEREREREREERERREEMEVEREVCQLSIGMG
VLGGGARLSHGFSSEGVKVGIPYGNVHPPPHSSVADSTVRGCGENYSDGERQKQPNTPEE
DVEVSRFNMSITAGPKPNAGTSQHRNIISKSSGYPPSSPHLSVVRGLGPPHLSTLASPLP
PPSPASLGSEINNATPNLPPSKTVPTQTPTPTSGGGSSSTSSRSRTPLSLAQQKYKKGDV
VCTPNGIRKKFNGKQWRRLCSREGCMKESQRRGYCSRHLSLRTKEMEAAGGERGGGGSSS
GTVTPSDLRGRASSEFEWDDTSRESSETSSRGDSRPRLVLPSLLPHDLSSRFDFDECEAA
TMLVSLGSSRSGTPSFSPISNQSPFSPAPSPSPSPLFGFRPANFSPITASPVLQHRRHRQ
PSGTGGGGTVGSKVTTSAGGGERERHTSGIQPSFHSNLTFTVPMSPSKRKPDAPPPPPLP
SHHHDYTPKTELEQGDLNNSFRVLSPHNPASHSRTHTPTFSRPRGVTTPSSSRPPSSTAV
SPPPLLVSPTPPSPLTPDGGPRRVVPVSHQTLRDSPVIVRNPEVPLAKFTECPLGRGGGG
GGGNEGGTDNTTSKDTGLTPLTPQPVSGLQVPVPINAAAATVPNGTVLLRSPAQTLVLVS
PTPSSLSTTVTPATPLQALSVTVSTTVTAPAPSSTDSSGEREENRGTGFGGELQQPVPCH
PSPTALLPLILPAESLHPVPRKDIIMGRPGTVWTNVEPRSVPVFPWHSLVPFLAPTQSDA
SSQPGEGQHPVNHPQAASMKTECHGVASLSQEPAEAPPTVERGPLSRPPPSSDEPHPEKE
KGEAERERPDSETESDVDDPFLPGVVPEQPISTSPVKRRTQSLSALPKDGDKNSPGKREK
DHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVK
EAHFKAHPDWKWCNKDRKKSSSEGRGVPGGKDIRERSMSESTEPHSVELKVSGPGLVGVS
ERGTGEGLVGQLTRPRAFSQSAMHTLERSDRGNTQALAELAQMCGDSGSQFSSHAPPLSQ
SQRGVSEDMTSDEERMVICEEEGDDDVIEDPYPNSSIDLKCKERVTDSDSENGSGDEIDQ
KRVFAPVICSSALSSSSHHTPHGRSVSLSSYPTSKHYDEGRSGGGGYSDHKRKERGKGEG
KDTFGGEGGGGGGGVQQSLSLSLGQSVISTSPAGGPPSSSVGSLGANPLLGIGAVRVAST
VVTNVMRPVISTPLPIASKPREGDTSSSPHPPERKSLTPHQQPQLLIGSGSGGGAAATGG
GYYSSSSPNPVGVGPGGVVTNLVLGGALSAQPAVQLITPSHQTQPSQHQVLPSAAVSVPH
SQTNGPLPLPLLQPQFLPASSLAAPGGKAITQVQYILPTLPANTHPKSPPQQLSQPTSIF
NLPTATPTHVSLANGKQQGTGSLTGYTSSSAVGVVSPGTRVQTQSPVLQGKMLVPMATVR
TAPAPTQQFPIVAPPLPVQNGAQTGSKIIQIAPMPVVQSQLPQGGAVHPSSPFPVTVGTA
AVVAPGSVPSQAVLLPPAPTRITYVQSTPGVPSTLPLVSTTSGSSTTQQGLPVAGSAYVP
SPLATLGFTAIAPPAQALVQPLIAGQPPILATAQSPSPSAPASGSGGQIVTAIYPPSTSV
TMATGVVSMTAVPPSLVYSVSSPSSASPHILSKHTATATAITHPHPQLHPDRQADRHLPP
DRPADRQTDRQAERQTELLTHSDRQLERQTQTSSSSGSVAPPSGAAVSIRPCSPPLQIQT
PGGTPKLTQLPLRTPQKVKATVANIPVGSYEGGGRGKEREREKDREREREKEREREREAA
ATSHFSFDPESPSTHPAEEPPSTDRPLEGSSATDSSDTRNRESTTTKEAGWKESLPSSPL
PPPSATEPALPPPQTDKDGPTPKKVKARPPPLKKTFDSVDKSGRVLSEVYFEERFAELPE
FRPEEVLPSPTLQSLATSPRAILGSYRRKRKNSTDLDSATDDQVSPKRKSRRRSSCSSEP
NTPKSAAKCEGDIFTFDRAATDGEDILTEMEFDKVPYSSLRRTLDQRRALVMQLFQEQGF
FPSAQATAAFQTRYSDIFPTKLCLQLKIREVRQKIMQTATPSDASGLGIPDSSGPLPGPS
GSQSGDGSVRGCGDLQDEEEEQGAEASPEDPRDSQDSSR
NT seq
8220 nt
NT seq
+upstream
nt +downstream
nt
atgagaccattaaagaaacacaaaggccgttctcccccgttaactagaggcagagggggg
agaaggagagggggctcccagcccctccaacagaaagaccccaaaagagtcaagaaggag
acactcatcaaaaccacacagcacacacccagcattccttccacacgtaaacagacccca
tccacagctaccaactctaatgaagaatccatcacaaacagcaatacccccacgagtgaa
cagtctgccgagctgaggaaacctgtggagtcagttgagaaagatggaaagaaggaagaa
gaaaagacagaaaaggagaagataatgatagtggggacgaatgtagtagttagtgccact
gatactgtagcaattcctacctctgccccaggaccgctctccacagccacaccccctctg
gccaccaatcacagccccagcttaggctcagtctctagtaggaaaacagccacatttaag
gcccgtgtacccaagaaaaagtacacttatgagcactttgctaacaatgcaagtgccctg
attaccatgcctacctccaactctgcactcatacaaaacagttactgcaatattaaaagt
aaaatcagtgaaagtgtaaatatgcccaataataatttcaagagtagtaacaatattagt
aatagcattaataaaagcattaatctaagcatcaatagtggtaacaataacatcacaagt
ggtattaacaacccaactaacagtagtaacagtagtgctgggagccatagttcttttatc
aatagcagtaatagtagaagtaataattgctcaggtaatcagccatcagtgcttactgtg
gatagtaaagctacagaagcaaacaattttgtttctacagaggatagggccctcaggaca
gcagattcccaggaaaaagattcccaatctggggaaaatgaatcagagttggcccctaac
tcagtgcgctcctcgtccactgatacagctagtgagcactcagctgacctggatgtgatg
gaggcaacagggccgagccttcatcaaaagaactcccacatcacagcttccctccataac
ttgcatcctaaagaggccagtctgtcagaggggctggctgaagccctggccaaaggcatg
aaaaaccagagagttcttgctcgtcagataaagaggaccatagagagtggggttggggct
acaggggtcagaagggttaaggagacaaactcatgccctttctcacctgtgttcagacca
ggggtggtgcgtagggtgagtggaggtactgttgacgtccagctccatggagaggagacc
cttgttaaataccctttccatggtggaaccgtgatgacatcgtcattagggactgagagc
actgtggagttcattttggatgcccccccacctggcatggcacctgtggctgttgggacc
cgagtgtgtgtgccctatggtggagaagagggagggcctctgctgtacagagaggggatt
gtcactcaagtggacccccaccccggtgtctcttttccttaccaggttctgctgagtgaa
gacaggaagactctggacgatggaggggtgggggaagagaaagagaaaaggaaagctaat
gctcatgcagtgtgggtgtcccgacaaagtctgagacttctcacccctccttgggaggtc
tcacatttggatggtgggagggccaaggagagagagcgggagagggaaagggaggagaga
gagcggagggaggagatggaggtagaaagggaagtgtgccagttgagtattggaatgggg
gtgctcggagggggagcaaggttgagccatggtttttcgagtgaaggagtcaaagtaggg
attccctatggaaacgtacatccaccaccccattctagtgtagctgacagcacagttcgt
ggctgtggagagaactactctgacggagagagacagaaacagccaaacactccagaagag
gacgttgaggtatctcgttttaacatgagcatcactgctggtcctaaaccaaatgctgga
acctctcagcacagaaacatcatctccaagtccagtggctaccctccctcctccccccac
ctctctgtggtgcggggtctgggacccccgcacctctccaccctagctagtcctctacca
cccccttcccctgcctcattggggtctgaaataaacaacgccactccaaacctacctccg
tcaaagaccgttcccactcagacccctactcctacttctggtggggggtcctcctctacc
tcctctcgctccaggactcccctttcattagctcagcagaaatacaagaagggcgatgtg
gtgtgcacccctaatggtatccgtaagaagttcaatggtaagcagtggaggaggctgtgc
tccagggagggctgtatgaaggagtctcagcgtcgaggatactgctctagacacttgtcc
ctgaggaccaaagagatggaggcagcagggggagagaggggaggaggaggcagcagctca
gggacagtcaccccctctgacctgcggggcagagcaagtagtgagtttgagtgggatgac
acatcaagagagagcagcgaaacgagtagcagaggagactccagaccccgcttggtcctc
ccctccctcctcccccatgacctgtcgtcacgctttgactttgatgagtgtgaggccgcc
actatgcttgtatcattggggagctcccgctctggcaccccttccttttctcccatctcc
aaccagtcgcccttctcccctgccccctctccctctccttccccactttttggcttcagg
ccagccaacttctccccgattactgcctcccctgtcctgcaacaccggaggcacaggcaa
cccagcgggacggggggaggagggacagtgggcagcaaggtaacaacctcagctggagga
ggagaaagggagagacacacttcaggcatccagccctcattccacagcaacctgaccttt
acagtccccatgagcccgagcaaacgaaagcctgatgcgcctcccccaccgccactcccc
tcacaccaccatgattacactcccaagacagagctggagcagggggacctcaacaactct
ttcagggtgctgtcaccccacaacccagcttcacattcccgcacacacacacctaccttc
tcccgacccagaggagtgaccaccccttcctccagtaggccaccgtcctccactgccgtc
tcccctcctcctcttctggtgtctccaactcctccttctcctctcactccagacggaggg
cctcgtcgtgtggtccctgtatcccatcagaccttgcgggactcccctgtcattgtgagg
aatcccgaagtcccactggcaaaatttacagagtgtcccttgggaagaggaggaggagga
ggtggtggaaatgagggagggacagataacaccacatctaaagacactggcctaacacct
cttacccctcagccagtttctggcctccaggttcccgtccccattaatgctgctgcagcc
acagtccccaatggcaccgtcctcttgcggagcccagcccaaactctagtgcttgtgtcc
ccaacaccttcttccctgtccaccactgttacccctgccactcccctgcaagccctgtca
gttaccgtcagcacaacagtcacagctccagctccaagtagcacagacagctctggggaa
cgagaggagaacagggggacagggtttgggggtgagcttcagcagccagttccctgtcac
ccttctcccaccgctctgctgcccttgatcctcccagctgaaagccttcatcccgtccca
cgtaaagatatcatcatgggacgtcctggcacagtgtggaccaatgtagaaccccggtca
gttccagtcttcccctggcattctttggtccctttcctggcacccacccaatcagatgct
tcttctcagccaggagagggccagcacccagtcaaccaccctcaagcagccagtatgaag
acagagtgtcatggggtggcatcgctgtcacaggagcctgcagaggcacctcccactgta
gagagaggtcccctgtcccggcctcccccctcttctgatgagccgcatccagagaaggag
aagggagaagcagagagggagaggcctgacagtgagacagagagtgacgtggatgacccc
ttcctcccaggagttgtacctgagcagcccatctctacatccccagtaaagaggcgcact
cagtccctcagtgcgctgcccaaagatggagataagaacagccctggaaagagggagaag
gaccacatccggcgaccaatgaatgcatttatgattttcagtaagcgccatcgagcattg
gtgcaccagcggcacccaaaccaggacaacaggacagtgagcaagattcttggggaatgg
tggtatgctctaggacctaaggagaaacaaaagtaccatgatttggccttccaggtaaaa
gaggcccactttaaggcccacccggactggaagtggtgcaacaaagacaggaagaagtcc
agctctgaaggccgtggggtacccgggggcaaagacatcagagaaaggagcatgtctgag
tccacagaaccccattctgtggagttgaaggtgtctggtccaggtcttgttggtgtgtct
gaaaggggtacaggagaaggccttgttggccagctaacccgtcctcgagccttttctcaa
agtgccatgcacaccctggagcgtagtgacaggggtaatacacaggccctggcagaactg
gcacagatgtgtggggatagtggcagtcagttttctagtcatgcaccacccctgtcacag
tcccagcggggggtcagcgaggacatgaccagtgatgaggagcgcatggtcatttgtgag
gaggagggagatgatgatgtcatcgaggacccttatcctaacagttccatagacctcaag
tgtaaggagcgagtgactgacagcgatagtgagaacggttctggagacgaaattgatcag
aagagagtttttgctccagtcatttgctcctctgcattatcatcttcctcacaccatacc
cctcatggcaggagtgtctcactgtcctcttaccccaccagcaagcattatgatgagggg
agatcaggagggggagggtattcagaccacaagagaaaggaaagaggaaagggagagggt
aaggacacatttgggggggaggggggaggaggaggaggaggagtgcagcagtctctttct
ctctctttaggccagtcagtcatctctacttctccagcaggagggcctccgtcctcatca
gtaggttcactgggtgcgaacccacttctgggcattggcgctgtaagggtggcttctacg
gtggtgaccaatgtaatgcgtcctgttatcagcacaccgctccccatcgccagcaagccc
agagagggagacacatcatccagcccgcatccaccagaaaggaagtccctgactccccat
cagcagccacaacttctaattggttcaggatcaggaggtggggctgctgccacagggggt
gggtactactcttcatcttcacctaatcctgtaggtgtgggcccaggtggtgtagtgact
aatttggtgttaggaggggctctgtctgctcaacctgctgtacagctcatcactccctcc
caccagactcagccctcccagcatcaggtgcttccctctgccgctgtttcagtaccacat
agccaaaccaatgggcccctgcctctgcccctgcttcagccccagttccttcccgcctct
tccctagcagcccccgggggtaaggccatcacacaagttcagtacatcctgcccacccta
cccgccaacacccaccccaagagtccacctcagcaactcagccagccaaccagtatcttc
aacttgcctacagctacacccacacatgtgtccctggcaaatggaaagcagcagggtaca
ggttcactgacaggctatacgtctagctcagcggtgggagtggtcagcccgggaactaga
gtgcaaacacagtctccagtgctgcagggtaaaatgcttgttcccatggcaactgtacgg
actgcgccagcccctacccagcagtttcccattgtggctccacctcttcctgtccagaac
ggagctcagaccggaagcaagatcatccagattgctcccatgcctgtggtccagtcccag
ctgcctcagggtggagcagtccacccttccagccccttccctgtaacagtgggcacagca
gcagtggtggctccaggatcagtcccctcccaggctgtactactgccaccagcacctacc
aggatcacctatgtccagtccactccaggggtcccatccactctgcctctggtctccacg
acatcaggctcttccaccacccagcaaggcctgccagtggctggatctgcatatgttccc
tcgcccctggcaacactcgggttcacagccatcgcaccacctgcacaggctctggttcag
cctctgattgcaggtcagccaccaatcttagccactgctcagtctccatcgccctcagcc
cctgcctcagggtctgggggacagatagtcaccgccatataccctccttcaactagcgtc
accatggcaacaggggtggtctccatgacggcagtgccccccagcttggtctattctgtc
tccagcccttccagcgcctccccccacatcctctccaaacacacagcaaccgccactgca
atcacgcacccacatcctcagctccatccggacagacaggcagacaggcacctgcctcct
gacagacctgccgatcgacaaactgacagacaggccgagaggcagacagagctgctgacg
cattcggacaggcagctggagaggcagacgcagacctccagcagtagtggctcagtggca
cctcccagtggcgcagctgtgtccataaggccctgcagtcctccacttcagatccaaaca
cctggtggcacacccaaactaacccagcttccactcaggacgcctcagaaggtgaaggca
acggtggcgaacatccccgtgggcagctatgaaggaggaggccgaggaaaagagagagaa
agggagaaggacagggagcgggagagggaaaaggagagggagagagagagagaagctgca
gccactagtcatttctcctttgatcccgagtctccttcaacacatcctgctgaagagccg
ccatccactgacagacccctggagggctccagtgcgacggactcctctgacacgcgaaac
agggaaagcacaaccaccaaagaggctggatggaaggagtccctcccctcctctcctctc
ccccctccatcagccacagaacccgccctgcctccgccacagactgacaaagatggtcct
acacccaaaaaggtcaaagcccgcccaccaccacttaagaagacgtttgactctgtggac
aagtctggcagggtgctgtcagaggtgtattttgaggagcgctttgccgagctgccagag
tttcggcctgaggaggttttgccttcacccaccctgcagagtctggccacttcaccccgc
gccattctgggcagctatcggcgcaagaggaagaactctacagatttggactccgccact
gacgatcaagtctctcctaagagaaagagtcgtcggcgctcaagctgtagctcagagccc
aacactcctaaaagtgccgccaagtgtgagggagacatctttacctttgacagagcagcc
acagacggagaagacatcctgacagaaatggagtttgataaggtgccatactcctccctg
cgaagaacactggaccagaggcgagcattggtcatgcagctattccaggagcagggcttc
tttccgtcagctcaggccactgcagccttccagacaagatactccgatatatttcccacc
aagttgtgtctgcagctgaagatcagggaggtccggcagaagattatgcagacggccacc
ccgtctgatgcctctggtttaggcatacctgactcaagtggtcccctccctggaccttct
ggctcccagtcgggggacggatctgtgagaggatgcggggacctgcaggatgaagaagag
gagcagggggcagaggcgagcccagaggatcctcgtgattcacaggactcttctagatga
DBGET
integrated database retrieval system
