Micropterus salmoides (largemouth bass): 119897465
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Entry
119897465 CDS
T07309
Symbol
arhgef5
Name
(RefSeq) trichohyalin isoform X1
KO
K20684
Rho guanine nucleotide exchange factor 5
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119897465 (arhgef5)
Membrane trafficking [BR:
msam04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
119897465 (arhgef5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SH3_2
SH3_1
SH3_9
PH
Motif
Other DBs
NCBI-GeneID:
119897465
NCBI-ProteinID:
XP_038567109
LinkDB
All DBs
Position
Unknown
AA seq
1853 aa
AA seq
DB search
MGTKRPGCTIFDTLSKINTDRKLQPGGKISRDPSPRSAMTAQSERERDRKREEDWREKEK
MRDKARHKDMDPQGYCESYRAPVARLREGQREWRKRERRQEDDRSRIERSLLNIEKETER
AVEWGMEKGDTFPRMRKSSADSGRRMVATTEMDEERGERRHRDRPKRVETDKDCKRERER
EQWRERDRKRDRDEMWFRAKGEGKNIGQRPGENEKWRQRERYQESDVGFQDRRRELGDLW
DRRERDEARKIEKLSPNTGKRQVRMPSPHIRRDGEIYSVSKEREKVHRREGRRDTRSEGD
SDEREMKRKRERNRKKEELIYQYSRSEGDNTGKAESERDQDRQGCREADTQRYRDREREV
DQSRKMGVERDRERYREVDRRAAREEERWKESVRDLKDDRNEGDRYREYEQRRRRETKER
EADPRWDDTKNTRSRSLSETAPRGPPQNQSSDMDSETKYRRGSYEERGSGREMITGSERV
VEKQRNPEGAAQRCLKEQKRSERQESDRGEKTGGGPEQRRMWLEPQRGKISKEDFLDRDR
HTRGEERRRREEERSMESQSEWGRKGRGIKEEPDENYLDQNSYRGRHGGRNEYRGDIDWE
TESVSVDGDEVGEVWGEVDKGGKEHLSDSDGGIEGSQRRDAERKNVTDKPEESDREEEGG
SDYCPRSESEGGSETGWKQEKDRMLSGEDGFVTVSSGGDDEDEREDDDGEMFEDCQEFWE
GGVTCEGPSPVAIKVCEGDKEKEEEWTVGKEEVVDDREVQGRDKRPKYVYCVIGQTLPRS
KTNKRSPSHVDQIGGVERDDPNLASSHHCSDDTMQQPQVDLHLTLSRNDEYRIISNQDTE
SKSECNVPQEERVAIGETSEVDIRLQVSSVLRNTETGEVMRSKKEHPYAELGTIKRDSPT
ERLLIDWREKNKEGVEREQISPIPSNSCGDVCTRVNFEQIQPILDGINIGVISPEEVEAI
RIRMSRAWSMSEEPTQRHSQAPHLKWAENVVQEILGCSEEGTVGRKMDYAEVQANRGVDQ
SEAAMLKDKRQDEAAEGTGEIPVVRLTTDEQHSEPELEEEEPLEVEGLRGMGQSQADVHA
DQFTAIHGDTPTYTHGDTTLDTEGKEDHSMDKETEPSGHLQSEKTYIEVKISEEAGDEVK
VSEMKKEGGRKKEVEMNLTVSNMLYKPHSCPFLNYECDSDLFIPSREGEAQEVEDRMGES
EEERQGGEPKERGTAEDVGKMREGEGTEEDNRKGEVVAETIKEGGTLTSSFSVQDLVREA
LSRRRGIRKTTERRTKELVEEEGVGRDRRTRIFSTSDDEDDRSKSWGEADLRTVLFDRRK
RNSKFFNAAQLYQQYSEAAQNFEILRQARSDALSVCEDSNASPAPSPPPARRPLPPLPHF
LHPHSLSHTGSFTSVKSLPLPEPPKTEGRPPSPRLSLSLTQSSTLWRDLPGVRNSSELEG
LTEDQRRLQEVRFEVVTSEASYCRSLDIVVEHFVMSKQLGALLTTQDRNWLFSRLADVRA
ISNSFLTKLEERVESNIFSFTVCDIIARHCPRFKKVYVPYLTNQSYQDATYQRLMNENPG
FKRIVEKLEKNPVCQRLPLRSFLILPFQRITRIKLLVQNIVKRTTPGTAEATQAIKCLKL
LEKLIQESNDSITQMKSIESLVSLSAKVDFDCRTLPLISQSRRLVREGPVAELMDFSIKE
TERNVYLHLFNDYLLLSLQKEGKFTVIDHSPVSDLRAENCRVKLHSLQKNLFRLHMTNQA
LLLRTDTQSDKLRWMSALSRPHPEIDFSAAQDMSQMQCIRAYVAHQPDELSLEKADVILV
HQQSSDNWVEGTRLPDRHRGWVPKSHLEIISNPRVRQRNLSDALKLTTATAAV
NT seq
5562 nt
NT seq
+upstream
nt +downstream
nt
atggggacaaaaaggcccggctgcaccatctttgacactttatctaagataaacactgac
cgcaaacttcagccaggtggaaaaatttcccgggatccaagtcccagatcagcaatgact
gcccagtcggagcgagagagagaccgcaaacgagaggaggactggagagaaaaagagaaa
atgagggacaaagcaagacacaaagatatggacccacagggatactgtgaaagttaccga
gctccagtggcccgactgagagagggacaaagagagtggaggaagagggaaaggaggcaa
gaagatgacagaagcagaatcgagaggtcgctcttgaatatagagaaggagactgagaga
gcggtagagtgggggatggagaaaggcgacacatttcccagaatgagaaaaagcagcgca
gatagtggcagaagaatggtggccaccactgagatggacgaagagagaggggaaaggagg
catagagataggccgaaaagagtagagacagataaagactgtaaaagagaaagagagagg
gaacagtggagagagagggatagaaagagagacagagatgagatgtggttcagggcaaag
ggagagggcaaaaacattggacaaagacctggagaaaatgagaaatggcgacagagggaa
aggtatcaggagtctgatgtaggttttcaagaccggagaagagaattgggagatttatgg
gacagaagagagagggatgaagctagaaaaatagaaaagctaagtcctaacacaggaaag
aggcaggtcaggatgccttctccacacataagaagagatggagagatctactcggttagt
aaggagagagaaaaggtgcacaggagagaaggaaggagggacaccaggagtgaaggagac
agtgacgagagagagatgaagaggaaaagagagaggaacagaaagaaggaggagttgata
tatcaatacagtagaagtgagggggacaacacaggcaaagcagagagtgagagagatcaa
gataggcagggatgcagggaagcagacactcagagatacagagacagagaaagagaagtg
gatcaatccaggaaaatgggagtggagagggatagggagaggtacagagaggttgacagg
agagcagcgagggaggaagaaagatggaaagaaagtgtgagagacttgaaggatgacagg
aacgagggtgaccgatacagagagtatgagcagcggagacgcagggagacaaaggaaaga
gaggccgatcctaggtgggatgacacaaagaacacaaggagccgatccctgagcgagacg
gctcctagggggccaccacaaaaccagagtagcgacatggacagtgagacaaaatataga
agaggcagttatgaagagaggggatcagggagagagatgattactggaagtgaaagagtg
gtagaaaaacagagaaatcctgagggagctgctcaaagatgtctaaaggagcaaaaaaga
agtgagagacaagagagcgataggggtgaaaagacaggcggcgggccagaacagagaagg
atgtggttagagccacagaggggcaagattagtaaagaagattttttagacagagacaga
cacacaaggggggaagagaggaggaggagagaagaagagaggagtatggagtcacagtct
gagtggggaagaaaggggcggggaataaaagaggaaccagatgagaattacttggaccaa
aatagttacaggggaagacacggagggagaaatgagtacaggggtgacatagattgggag
acagagagtgtaagtgtagatggagacgaggtgggtgaggtctggggagaagtagataaa
ggtgggaaggaacatctgtctgacagcgatggagggatagagggaagccagcggagggat
gcagagagaaagaacgtgacagataaaccagaggagagtgacagagaggaagagggtggg
agcgattattgtcctcgctccgagagtgaaggaggaagtgagacagggtggaagcaagag
aaagacaggatgctgtcaggagaagacggctttgtgaccgtgtccagcggcggagacgat
gaggacgagagagaggacgatgatggggagatgtttgaggactgtcaggaattctgggaa
gggggagttacatgtgagggcccctcacctgttgccatcaaggtgtgtgagggtgacaag
gagaaggaggaggaatggacagtgggaaaggaggaggtggttgatgacagggaggtacag
gggagggataagcggccaaagtacgtctactgtgtgattgggcaaacgttgccccgatca
aaaaccaacaagaggtcaccatcacatgttgatcagattggaggagtggaaagagacgac
ccaaatttagcaagcagtcatcattgtagtgatgacaccatgcagcaacctcaggttgac
ctgcatctgacactgagtagaaatgatgaataccgaatcatcagcaaccaggacacagag
agcaagagtgagtgtaacgtgccacaggaggagagggtggcaattggagaaacatctgag
gtggatatcagactccaagtgtcatcagtgcttcgaaatacagagactggagaggtaatg
aggagcaaaaaggagcacccgtatgcggaattagggacaattaaaagagactcaccgacg
gaaagactcctcatagactggagagagaaaaataaagaaggggtggaaagagagcagatt
tcaccaatcccaagtaattcctgtggtgatgtttgtactcgtgtgaattttgaacaaatt
caacccatcttggatgggattaacattggagtgataagcccagaagaggtggaggctatt
cggatcagaatgagcagagcatggagcatgtccgaggagcccacccagcgtcattcccaa
gccccccatcttaaatgggctgaaaatgtggtgcaggagattctgggatgctcagaagaa
gggaccgtgggaagaaagatggattatgcagaggttcaagctaatagaggggtcgaccaa
tctgaggcagcaatgttgaaagacaaacgccaggacgaggctgcagaagggactggagag
attcctgttgttaggttgacaacagacgaacagcactcagagccagagctggaggaagaa
gagccattggaggtggagggattgagaggtatggggcagagccaagctgacgtgcatgct
gaccagttcacagctatacatggtgacacacctacatacactcatggtgacacaacgtta
gacacagaagggaaagaggatcacagtatggacaaagagactgagccttctggtcacctt
cagtcagaaaaaacatacatagaagtgaagattagtgaagaggcaggagatgaggttaag
gtatcagaaatgaaaaaagaaggaggcagaaagaaggaagttgagatgaatttaactgtg
agcaacatgctatacaagcctcacagctgcccctttcttaattatgaatgtgactctgac
cttttcattccctccagagagggtgaggcccaggaggtggaagacagaatgggtgaaagt
gaagaggaaaggcagggaggggagcccaaagagaggggtactgcagaggacgtgggaaag
atgagggagggagagggaactgaggaggataacagaaagggagaggtggtggcagaaacg
ataaaagaaggggggactctgacaagcagcttcagtgtccaagatttggttcgggaagct
ctatcaagaagaagggggatccgtaaaaccactgaaagaagaaccaaagagcttgtagaa
gaagaaggtgttggaagggatcgcagaaccagaatattctctacatcagatgatgaggat
gatcggagcaaaagctggggagaagcagacctgaggactgtcctgttcgacagacggaaa
agaaactcaaagtttttcaacgctgctcagctctaccagcagtacagcgaggccgctcag
aactttgaaatcctgcgtcaggctcgctctgatgccctttctgtatgcgaggacagtaat
gcgtctcctgctccctcacctcctcctgcccgcagacctcttcctcccctacctcatttc
ctacacccccactccttgtcccacacaggttcctttaccagtgtcaaaagcttgcctctc
cctgagccccccaagactgaaggcaggcctccctccccacgtctatccctctctctcaca
cagtcatccacactgtggagggacctgccgggggtcaggaacagttctgagctggaaggg
ctcacagaggaccagaggcgactacaggaggtgagatttgaagtggtgacctcagaggcc
tcctactgccggagtttggacattgttgttgaacactttgtcatgtccaaacagctgggg
gcgctgttgaccactcaggataggaactggctgttttcccggctggcagatgtgcgtgcc
atcagtaacagttttttgacaaagctggaggagcgggtggaatcgaacatattttccttc
accgtgtgtgatatcattgctcggcactgtccacgcttcaaaaaggtttatgtgccctac
cttaccaaccagtcttatcaagatgccacctaccagagactcatgaatgagaatccaggg
ttcaagcggattgtggagaaattagagaagaatccagtttgtcagaggcttcctcttcgt
tcctttcttatccttcctttccaaaggatcacaagaattaagctgctggtccagaacatt
gtgaagagaacaactcctggtactgcggaggcgactcaggccatcaaatgtttgaaactt
ctggaaaagctgattcaagagagtaacgacagcatcactcagatgaaaagcatcgagtcc
ctggtctctctcagtgctaaggtggactttgactgcaggactcttcctctgatcagtcag
tctcggaggctggtacgggaagggccggttgctgaactgatggatttctctataaaggaa
acagagaggaatgtttacctgcacctattcaatgactacttgctactttcactacaaaaa
gaggggaaattcacagtgatagaccactcccctgtatcagacctgcgtgcagagaactgt
cgtgtcaaacttcactccctccagaagaacctgttccggctgcacatgacaaaccaagcc
ctgctgctacgcaccgacacacagagtgataagctacgttggatgtcagctctttcccgg
ccacatcctgaaatagatttttctgctgcacaagatatgtcacagatgcagtgtatccga
gcttatgttgcccatcagcctgatgagttgtcgttggaaaaagctgatgtcattctagtg
caccaacaaagcagtgacaattgggtagaggggaccagactgcctgatcgacatcgtgga
tgggtacccaagtcccatttagaaatcataagcaaccctagagtccgacaacggaacctg
tcagatgcactcaaactgacaacggccacagctgctgtttga
DBGET
integrated database retrieval system
