KEGG   Micropterus salmoides (largemouth bass): 119897562
Entry
119897562         CDS       T07309                                 
Symbol
itga10
Name
(RefSeq) integrin alpha-10
  KO
K06586  integrin alpha 10
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam04510  Focal adhesion
msam04512  ECM-receptor interaction
msam04810  Regulation of actin cytoskeleton
msam04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:msam00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    119897562 (itga10)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    119897562 (itga10)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    119897562 (itga10)
   04810 Regulation of actin cytoskeleton
    119897562 (itga10)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:msam04515]
    119897562 (itga10)
Cell adhesion molecules [BR:msam04515]
 Integrins
  Integrin alpha subunits
   119897562 (itga10)
SSDB
Motif
Pfam: VWA FG-GAP Integrin_A_Ig_1 Integrin_A_Ig_2 Integrin_A_Ig_3 VWA_2 FG-GAP_3 FG-GAP_2 vWA_SIBA-E ITGAX-like_Ig_3
Other DBs
NCBI-GeneID: 119897562
NCBI-ProteinID: XP_038567287
LinkDB
Position
Unknown
AA seq 1171 aa
MEPRKYLLCLEFILLLKEFCECFNIDVMHPRIFTGPEDALFGFSVLQHESDGEKTMLVGA
PWDGPPNNRKGDVYKCIVGEEKNSNCSKVNLGETALQNVSKNLRNSHLGMTLTPNSPDGF
LACAPLWSQECGTSMFSTGICASVSDDLEPREAIAPTAQRCSTYMDIVIVLDGSNSIYPW
YEVQNFLSNILSKFHISSDQMQVGILQYGEVAVHEWSLKDYQTTQEVVEAAKNISRQEGR
ETRTAYAIHMACSEAFSTERGAREGATKVMIVVTDGESHDGEELQDALRECENRNITRYA
IAVLGHYIRRQQDPEAFIREIKYIASDPDDKYFFNVTDEAALNDIVDALGDRIFTLEGTL
GYNESSFHMEMSQIGFSTHTLDDGILFGMVGAYDWDGGVLKEGTNGRIMPPREAFESEFP
LELKNHAAYLGYTVSSVVVGDWKRLYVAGAPRFKHKGKVILFELSNEGDVNIVQALNGEQ
IGSYYGSELCGLDIDQDGITDVLLVAAPMYLGSGNKEAGRVYIYTLSGEEVFVSNGTLKS
EEKSQDARFGYALAAAPDLNHDGFTDLLVGAPLEDEHRGAIYVYHGDGIYIIHSFKQRIS
GSSISPSLKYFGRSVSARLDLDGDELIDLAVGAQGNAVLLSSRSIVQINVRLSFQPHSIN
VIQKTCQRGGRESACLNATACFTTVSRSPGSHSNSFDLWVSAMLDDRKLSARALFDDSSH
RQTQLAVQVHTGQTLCYKLPFHVYDTADYIRPISFSLRFKINNTESGPVLDEGWPTAVKK
SIQFFKDCGEDDVCTTDLVLQAHTDISGTRQKPYVIRSPRRRLAVEVQLQNRLENAYNTS
LTLHYSRNLHFSSLSIREDAHFKIECTALGANSHLCNVSYPVFRSQSKVNFMLEFEFSCT
SLHSRVQMKLNAASDSVEREDTLGDNSVQLQSFVQYEPDLFVSSDSNLNRYEVHPTRTVS
EAIGPEFYTHLRVQNLGCYSVSNLELRLHLPSVAAGDRVFMTVSDVFSYNATGVNCSMQS
NLPQLKARQRDVRALHPEDMMQNDILNCSRSWCTEVVCEVQQLLRGQAAVIRVSRRVHDD
FFRNAKYKSVRVIGAYRLAAQETNLITLGTGIVWRETVLEVLKGRAIPISLWILIGSIIG
GLLLLALIIFILWKLGFFARKQRGEDENHED
NT seq 3516 nt   +upstreamnt  +downstreamnt
atggagccgcgtaaatacctgttgtgcctggagttcatcctccttcttaaagagttctgt
gagtgtttcaacatagatgtgatgcatccgcgcatcttcaccggtccagaggacgctctg
tttggcttctctgttctacaacatgaatcagacggagagaaaacgatgctggttggtgct
ccctgggacgggccgcccaacaacaggaaaggagatgtgtacaaatgcattgtgggagag
gagaagaactcaaactgcagcaaagtgaatctaggtgagactgctctccagaacgtttct
aaaaacctgaggaattctcacctgggaatgactctcactccaaactcacctgacggcttc
ctggcatgtgcccctctgtggtctcaggagtgcggtacatctatgttcagcaccggcatc
tgtgcctctgtcagcgatgacctagaaccaagagaggcaatcgctccaacagcacaaagg
tgctccacatatatggacattgtgatcgtgctggatggctccaacagtatctacccctgg
tacgaggtccagaacttcctcagcaacatcctcagcaagttccacatcagctcagatcaa
atgcaggttggtatacttcagtatggtgaggtagcagtccacgagtggtctctgaaggac
taccagaccacacaggaggtggtggaggccgccaagaacatcagcagacaggagggacgg
gagacgcgcactgcatatgccatccacatggcctgctcggaggcgttcagcactgagcgt
ggagcaagggagggcgccaccaaggtgatgatcgtagtgacggacggagagtcacatgac
ggggaggagctacaagacgctctgagggagtgcgagaacagaaacatcaccagatacgcc
atcgctgttctgggtcattacatccgccggcagcaggaccctgaggcattcattagagag
attaagtatatcgccagcgatcctgatgacaaatattttttcaatgtgaccgatgaagct
gcactcaatgacattgtggatgccctgggggatcgcatcttcactttggaaggcacactg
ggctacaacgagagctcgttccacatggagatgtctcagatcggcttctccacgcacacg
ctggatgatggcattctgtttgggatggtaggcgcctatgactgggatggtggcgtgttg
aaggaggggaccaacggacgcattatgccgcccagagaggcttttgaaagcgagtttcca
ctggagctcaaaaatcatgctgcttatttaggttacacagtgtcatctgtggtggttggt
gactggaagaggctgtatgtagctggggctcctcgattcaaacacaaaggcaaagtcatc
ctatttgaactcagtaatgagggtgatgtcaacattgtacaggccctcaatggggaacag
attggatcttactatggcagcgagctgtgtggcctggatatcgaccaggatggcatcact
gatgtccttctggtggcagctccaatgtacctcggctcaggaaacaaggaggctggtaga
gtctacatctacaccctcagtggggaggaggtgtttgtatctaatggtactctgaagtca
gaggaaaagtcccaggatgccaggtttggttatgcactggcagccgctccagacctcaac
cacgacggcttcactgacctgctagtgggagccccgctggaggatgaacacaggggggcc
atctatgtctaccacggagacggcatttatatcatccacagtttcaagcagcgtatttca
gggtcatcgatttccccctccctgaagtattttggccgcagtgtgagtgctcggttggat
ttggatggagatgagctaatagacttggcagtgggagcacagggcaacgctgtgctgctc
agctctcgaagcattgtccagatcaatgtgagactgtccttccagccacactccatcaac
gtcattcagaagacgtgccagaggggaggcagagaatcagcctgtctcaatgccactgcc
tgtttcacaactgtgtctcgctcccctgggtcacacagcaacagctttgatctgtgggtg
tcggccatgttggatgacaggaagttgtctgcacgggcgctgtttgacgacagctcccac
cgacagacccagctggcagtccaagttcacacaggacaaactctctgctacaaactgccc
ttccatgtctatgacacagcagattacatccgtccaattagcttctcactgcggtttaag
atcaacaatacagagagtggcccagtgttggatgaaggctggccaacagctgtcaagaag
tctatccagttctttaaagactgtggtgaggatgatgtgtgtacaacagacctggtgctg
caggctcatacggacatctctgggacaagacagaagccttatgtgattcgcagccctcgt
aggcgtctggcagtggaggtgcagcttcagaacagactggaaaatgcctacaacaccagc
ctgacgctgcactattcacgcaacctgcacttctccagcctcagcattagggaggatgcc
cactttaagattgagtgcacagcacttggtgccaacagccacttgtgtaatgtcagctat
ccagtatttcgctcccagtcaaaagttaacttcatgttggaatttgagttcagctgcaca
tctctgcacagtcgagtgcagatgaagcttaatgctgccagtgacagtgtggagagagag
gacactttgggggacaacagtgttcagctgcagagttttgttcagtatgaaccagacttg
tttgttagcagtgactctaatttgaaccgatatgaggtccatcccactcggacagtatca
gaggcaattggaccagagttctacacacacctcagggtacagaaccttggctgttactct
gtaagtaatctggagctcaggctgcatctgccctctgtggctgcgggagacagagtcttt
atgaccgtcagtgatgtcttttcatacaacgccacaggggtgaactgcagcatgcagagt
aatcttccccagctgaaggccagacagagagacgtacgcgcccttcatcctgaagacatg
atgcagaatgacatactgaactgcagcagatcatggtgcactgaggtcgtgtgtgaagtc
cagcagcttctaagagggcaggccgctgtcattcgtgtcagccgcagagttcatgatgat
tttttcagaaacgccaaatacaagtcagtgagggtaataggtgcctatcgcctcgcagct
caggagactaacctcattactctgggcacaggaatagtttggagggagacagtactggag
gtgctaaagggccgagcaattcccatctcgttgtggattctgattggtagcatcattgga
ggtttgctgttactggccctcatcattttcatactatggaagctgggattcttcgcacgc
aaacagagaggtgaggatgagaaccatgaggactga

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