Micropterus salmoides (largemouth bass): 119897579
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Entry
119897579 CDS
T07309
Symbol
snx27b
Name
(RefSeq) sorting nexin-27b isoform X1
KO
K17936
sorting nexin-27
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119897579 (snx27b)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
msam04990
]
119897579 (snx27b)
Membrane trafficking [BR:
msam04131
]
Protein recycling
Others
Others
119897579 (snx27b)
Domain-containing proteins not elsewhere classified [BR:
msam04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
119897579 (snx27b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
SNX17-31_F2_FERM
VirE3
PDZ_2
USP7_C2
SNX17_FERM_C
RA_3
Motif
Other DBs
NCBI-GeneID:
119897579
NCBI-ProteinID:
XP_038567319
LinkDB
All DBs
Position
Unknown
AA seq
571 aa
AA seq
DB search
MADVEGEGICSSVPPLPHPSSRNGSGSGNVTPGTGGSCQTATTVTSGPRLVRIVKSDSGY
GFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVNVEGAT
HKQVVDLIRAGERELVLAVLSVPPQEADCLDPGDEVSSQSCYDYSDKQAVPISVPSYKHT
ELNQEKFVVYNVYMAGRQLCSKRYREFVILHQNLKREFANFTFPKLPGKWPFSLSEQQLD
ARRRGLEEYLEKVCSVRVIGESDIMQEFLSESDENYNGVSDVELRIAMPDKTTLTVRVRK
NSTTDQVYQAVVMKLGMDSVTASYFALFEVINHTFVRKLAPNEFPHKLYVQNYTSAIPGT
CLTLRKWLFTTEEEILLNDNQLAVNYFFHQAVEDVKKGFVKAEQKSYQLQKLAEQKKMSM
YLSLLRGCEGYNEIIFPHCSCDSRRKGHVITAISIHHFKLHACTEEGTLENQVIAFDWGE
MQRWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKEVEEEATD
KDNKNCSKDEYFPAAEAQKGWRHLGREIITS
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtcgagggagaagggatttgttcatcggttcctccgttgcctcacccttcc
tctcgtaacggctccggtagcggtaacgttacaccgggcactggcggcagctgccagacg
gcaaccaccgttacttcaggcccacggctagttcgaatagtgaagtctgattcgggctat
ggctttaatgtgcggggacaagttagtgaaggtgggcaacttcggagcattaacggggaa
ctgtacgctccactgcagcatgttagtgctgtcttaccgggaggtgccgccgacagagcc
ggtatttcaaagggggacaggattcttgaagttaacggtgtgaatgtggaaggagcgacc
cacaagcaggtggtggaccttatcagggctggagagagggagctggtgctggctgtgctg
tcagtgccgccgcaggaggccgactgcctggatcccggagacgaagtttcatcccagtcc
tgctatgactactcggacaagcaggccgtccccatctctgtgccgagctacaaacacact
gagctcaatcaggaaaagtttgtggtctataatgtgtacatggcgggcaggcagctgtgc
tccaaacgttaccgtgaatttgtgatcctacaccaaaacctgaagagggagtttgccaac
tttacgttccccaagttgcctgggaaatggcccttttccctgtcggagcagcagctggac
gcacgacgcagaggcctggaagaatacctggagaaagtgtgctctgtacgggtaattgga
gaaagtgacatcatgcaggagttcctgtctgaatcagatgagaactataacggcgtgtcg
gatgtggagttgagaatagccatgcctgataaaaccacgctcactgtcagagttcgcaaa
aactcaactacagaccaggtctaccaggctgtggttatgaaactcgggatggacagcgta
acagccagctactttgctctgtttgaggtcatcaaccacaccttcgtgcgtaagcttgcc
cccaacgaattcccccacaaactgtatgtacagaactatacctcagccatcccaggaacc
tgcctcaccctgcgcaagtggctcttcactacagaagaggagatcctgctcaatgacaac
cagcttgctgtcaactacttctttcaccaggccgtggaagatgtgaagaaaggctttgtc
aaagcagagcagaagtcctaccagctgcagaagctggctgagcagaagaagatgtccatg
tatctgagtttgttgaggggttgcgagggctacaatgagattatattcccccactgttcc
tgcgactctcgacgcaaaggccatgtcataacagccatcagcattcaccacttcaagctg
catgcctgcaccgaggaagggacactcgagaaccaggtgattgcatttgactggggggag
atgcaaaggtgggacacggatgaagagggcatggccttctgctttgaatatgcacgagga
gagaagaaaccacgctgggtcaagatatttacaccctattttaactacatgcatgagtgc
tttgagagagtcttctgtgagctcaagtggaggaaggaggtggaagaggaggctacagac
aaggacaataagaactgcagtaaagatgaatattttccagctgctgaggcacagaaggga
tggaggcacctaggaagggagatcattacctcttaa
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