Micropterus salmoides (largemouth bass): 119897618
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Entry
119897618 CDS
T07309
Symbol
rorc
Name
(RefSeq) nuclear receptor ROR-alpha A isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119897618 (rorc)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
msam03310
]
119897618 (rorc)
Transcription factors [BR:
msam03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
119897618 (rorc)
Nuclear receptors [BR:
msam03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
119897618 (rorc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
119897618
NCBI-ProteinID:
XP_038567375
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MPAPSRALEQPTGPTQCFEGRVMEYEEPDVPPGDAPFERGGVVSKKTHLTQIEVIPCKIC
GDKSSGVHYGVITCEGCKGFFRRSQLPTVSYSCSRQSNCQIDRASRNRCQHCRLQKCLAQ
GMSRDAVKFGRMSKRQRDSLIAEVERHRQQQQQQQQLQVDAQSVLSYPTKARQDRSPQLL
QPMTYSFTGEADLLPYTADVHPYLVCSPNESQVSGMIYRGSGVSPTSRSQGRGDNSGHPN
IRGFESRQPSHELMGIHPYNHLEDPYSLYPHSLRNIDELCASIVRSHRETSQYRAEELQA
LRWKLFSREEIQAYQSKSVDEMWQHCAIRLTDAVQYVVEFAKHIPGFRMLSQNDQIALLK
TGSMEVVLVRMSRFFNTENNTVFFDGKFAGVEVFKSLACGDLITSVFDFAHGMCALKLTE
HQLALFSALVLINTDRPCLEDRGRVQRVQRSVEFGLTHILHRDNQESLMQKLYQKMAVLR
TLCSMHMEKLRWFSQRYPLTAHSLFPPLYKELFASEAELLPGTTH
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcgccgtcccgggcgctagaacaaccaacagggcccacccagtgttttgaaggg
agagttatggaatatgaggagcccgacgtgcccccaggtgacgcccccttcgaaagagga
ggagtcgtgtccaagaagactcatttgacccagattgaagttatcccatgcaagatctgc
ggtgataagtcctctggagtgcattatggagtcatcacttgcgagggctgcaagggtttt
ttccggcgcagccagctgcctactgtatcctactcctgctccaggcagagtaattgtcag
attgaccgggccagccgcaaccgctgccaacactgccgtctgcagaagtgcttggcacag
ggcatgagcagagatgcggtaaagtttggacgaatgtccaaacgtcaacgggactctctg
attgctgaagtggagaggcaccggcagcagcagcaacaacagcagcagcttcaggtagat
gcccagtcagtcttgtcctaccccaccaaggcccgtcaagatcgctccccacagcttctt
cagcccatgacctactcctttaccggggaggcagacctgctgccctacactgctgatgtt
cacccctacctggtgtgctccccgaacgagtcacaggtgtcaggtatgatctaccgaggt
tccggtgtgtctcccacatcgagatcccaggggaggggggacaacagcggacaccccaac
ataagaggatttgagtccagacagccatctcatgaactgatggggattcatccctacaac
catctggaggatccttacagcctctatcctcactctttgagaaatatagatgagctttgt
gccagcattgtgcgttcccacagggagaccagccagtacagagcggaggagcttcaggct
ctcagatggaaactgttcagcagagaggaaattcaagcctaccagagcaaatcagtggat
gagatgtggcagcactgtgccatccgactgactgatgctgtgcagtatgtggtggagttt
gcaaaacacatcccaggtttccgtatgctcagccagaacgaccagattgctctcctaaag
actggctccatggaggtggttctggtcaggatgagtcggttcttcaacacagagaacaac
actgtcttctttgatgggaaatttgctggagttgaagtcttcaagtctttggcatgtggt
gatttgatcacatcggtgtttgactttgctcatggtatgtgtgctctaaagctcacagag
caccagctcgctctcttcagtgctctggtgctgatcaacacagatcgtccatgtctggag
gatagaggtagggtccagcgagtgcaaagaagcgtggagtttggactcacacacattcta
cacagagacaaccaagaaagtctaatgcaaaagctgtaccagaagatggcagtgttgcgt
acactgtgcagcatgcacatggagaagctgcgatggttcagtcagcgttacccgctcact
gctcactctctgtttcctccgctctacaaggagctgttcgcctctgaggcggagctgctg
ccggggaccactcactga
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