Micropterus salmoides (largemouth bass): 119897659
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Entry
119897659 CDS
T07309
Symbol
rad54b
Name
(RefSeq) DNA repair and recombination protein RAD54B isoform X1
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119897659 (rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msam03400
]
119897659 (rad54b)
DNA repair and recombination proteins [BR:
msam03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
119897659 (rad54b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_22
Motif
Other DBs
NCBI-GeneID:
119897659
NCBI-ProteinID:
XP_038567456
LinkDB
All DBs
Position
Unknown
AA seq
934 aa
AA seq
DB search
MRRSGAPSQLLGNAVKKPRFVPPGALTSCPVAVSKHLTPKFGLGNALEKIQRSLAAPAPV
KTEYEIQPAPALSKALARVLSATESKENEAEAGPSNAGLEEFTEDDNRPAICPCFTGVNG
FPQVTPGSACVSGVAGSDSGGSQDGVRYLSVMWCKASKKKHKRWEGDAVLVTRGRTATLK
DMEGKDIGKGSGYKVSELASLSEGETLMIGGKEVEVMGVISAEDFARGRCFQEVQVEKEG
PHTKSALLSSQHLGSKPFCPPTMLGRADHPGSKAEEEETCRPRHDPLAPGALVMPRPSPN
HQWSNNKSGLPMVDVVVDPYLTTHLRPHQRDGLLFLYECVMGMRAVGRYGAILADEMGLG
KTLQSVALSWTLLKQGPYGGKPVAKRILVVTPGSLVQNWGAEFNKWLGRERISVFTVGQE
HRIEQFVLSPLHSVLVISYEMLLRCLEQVQRVEFGLIICDEGHRLKNSSIKTSSALSSLS
CNRRVILTGTPVQNDLQEFFAIIEFVNPGILGSTTAYRKVYEEPILRSRQPSCTDEERVL
GEERAAELSRLTGMFILRRTQEIINCYLPPRLDWTLFCDPSPLQRELYKRLLCHRVFRAC
LQGSMQTHTHLACITALKKLCNHPGLLYSIVKERTDSSVESSLYEGLVDLFPESYSSGGL
NSADSGKLLVLSDMLTAIRQLSPSDRVVVVSNYTKTLDLLQDLCVHMGYTFCRLDGQTPT
SQRQRLVDSFNSPYSKNFLFLLSSKAGGVGLNLVGASHLVLYDIDWNPANDIQAMARVWR
DGQKKTVHIYRLLTAGTIEERIFQRQVSKQGLSGTVVDLGKGAEHTSFSTSDLRDLFSLT
DTLSLTHDLLNCSCSMDGSIQAAVEDEEKVSDRPCQLGRQGERGGSLQKHLSMSELMQWR
HFSGDTHTFSDPYLDHARNHITFAFQTTISQTTD
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgctcaggagctcccagccagctcttgggtaatgcagtgaaaaagccccggttt
gttcctcctggagcactgacgtcatgtcctgtggctgtatccaagcaccttacccctaaa
tttggtttgggcaatgcactggaaaagatccagagaagtctagcagcaccagctccggtt
aaaacagagtatgaaatccagcctgctccagccttgtcaaaggctttggctcgggttctc
agtgcaacggaaagtaaggaaaatgaggcagaggcaggaccttctaatgctggcttggaa
gagttcacagaagacgacaacagaccagcaatatgtccttgttttacaggagtgaacggt
ttccctcaggtgactcccgggtcagcctgtgtttctggagttgcaggctcagactccggc
ggcagtcaggatggagtgcgttacctcagtgtgatgtggtgtaaggccagtaagaagaaa
cacaagcgctgggagggcgatgcagttctggttacaagagggcgcacagccacattgaaa
gatatggaggggaaggatattggcaagggaagtggctacaaagtgtctgagctggcgtcc
ctgtccgagggagagaccctgatgattggagggaaggaggtggaggtgatgggagtcatt
tctgcggaggacttcgccaggggacgttgtttccaagaggtccaagtagagaaagagggg
ccacacacaaagtcggccctactgtcctctcagcacctggggtccaaacctttctgtccc
ccaacaatgttggggagagcagatcatccaggatccaaagcagaggaggaagaaacctgc
agacctcgccatgacccactggctccaggtgcactggtgatgcctcgtccctctcctaac
caccagtggtctaataacaagtcggggcttcctatggttgatgttgttgttgacccatac
ctgaccactcacctgcgaccccaccagagagacggcctgctctttctctatgagtgtgtc
atgggcatgagagctgtgggtcgctatggggctattctggctgatgagatgggcctgggt
aagaccctccagagcgtggcactgtcctggacgttgcttaaacaaggaccgtacggtggg
aaaccagtcgctaagcgcatccttgtggtcacccccggcagccttgtgcagaactggggt
gcagagtttaacaagtggctgggccgtgagcggatcagcgtttttaccgtgggtcaggag
cacaggatagaacagtttgtgttatcccctctgcacagcgttcttgtgatcagctacgaa
atgctgctgcgctgcctggagcaggtccagagagtggagttcggtcttataatttgtgac
gagggccacagattaaagaacagcagcatcaaaacgtcctcagccctcagtagcctgagc
tgtaaccgcagagtcatactaacaggcaccccagtacagaacgacctgcaggagttcttt
gctattatagagtttgttaacccggggattctcgggtcaaccactgcatataggaaagtg
tacgaggagcccattctacgctccagacagccctcctgcacagacgaggagagagttttg
ggagaggagcgagcagcagagctctctcgcctgactggtatgttcatcctcagacggact
caggagatcatcaactgctacctgcctccccgtctcgactggacattgttctgcgacccg
tcccctctgcagcgagagctatacaagcgtctcctctgccacagagtcttcagagcctgc
cttcagggctccatgcaaactcacacacacctggcgtgcatcactgccctgaagaagctc
tgcaaccaccctggtctgctctactccattgtcaaggaaagaacagacagttcagttgag
agctctttatacgagggcctggtagatctcttcccagaatcttactcttcaggtggactc
aacagcgctgactctggaaaactcctggttctctcggacatgctgactgccatcagacaa
ctcagcccttcagacagggtggtcgtagtgtccaactatactaagacacttgacttgctc
caggacttgtgtgtacacatgggctacaccttctgccgacttgacggacagacccccacc
agccagagacagcggctggttgacagttttaacagcccctactctaagaacttcctgttt
ctgctcagctccaaagcaggtggagtggggcttaatctggtgggtgcgtcccacctggtg
ctgtatgatattgactggaacccagcaaatgacattcaggcaatggctcgagtatggaga
gatggacagaagaagacagtgcacatctatcgtctccttactgcaggcactattgaggag
cgtatattccagagacaggtgtccaaacaggggctttcggggacggtggttgacctgggc
aaaggggcggagcacaccagcttctccaccagtgacctgcgagatctctttagcctgaca
gacacgctctctctaacacacgacttgctgaactgcagctgcagcatggacggttcaatc
caggctgccgtagaggacgaggagaaggtttctgacaggccgtgccagcttggtcgtcag
ggtgaacgtggggggtcgttgcagaagcatctcagcatgtctgagctgatgcagtggaga
cacttctctggtgacacacacaccttctcagacccctaccttgatcacgcacgaaaccac
atcaccttcgcctttcagaccaccatctctcagacaactgattaa
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