Micropterus salmoides (largemouth bass): 119897768
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Entry
119897768 CDS
T07309
Symbol
rxrbb
Name
(RefSeq) retinoic acid receptor RXR-beta-B isoform X1
KO
K08524
retinoid X receptor alpha
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03320
PPAR signaling pathway
msam04148
Efferocytosis
msam04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119897768 (rxrbb)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
119897768 (rxrbb)
03320 PPAR signaling pathway
119897768 (rxrbb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119897768 (rxrbb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
msam03310
]
119897768 (rxrbb)
Transcription factors [BR:
msam03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
119897768 (rxrbb)
Nuclear receptors [BR:
msam03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
119897768 (rxrbb)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
119897768
NCBI-ProteinID:
XP_038567632
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All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MSSQQPNSSASNSPTNILGSPFSVISPSLNSPVVSPSLGFGPISNSQISSSAPISGMHSI
SSSEDIKPPFGLRPMPAHSPGLMLSQKRMCVICGDRSSGKHYGVYSCEGCKGFFKRTVRK
DLSYTCRDNKECLVDKRQRNRCQYCRYQKCLAMGMKREVIKHVKWIKEDGKDEGWMTVQE
ERQRNREREGELEFSVGVNEEMPVEKILEAETAVEQKTELHSDGGSAGNSPHDAVTNICQ
TADKQLFALVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGVLLASEL
QRDSAHSAGVGAIFDRESVQSAEVGAIFDRVLTELVNKMRDMQMDKTELGCLRAIVLFNP
DAKGLSNTSEVELLREKVYASLEAYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFF
FKLIGDTPIDTFLMEMLEAPHQLS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcacagcagcccaacagttcagcctccaacagccccaccaacatcttgggttct
cctttctcagttatcagtccatcactcaactcccccgtggtctccccctctctgggattt
ggacccatcagcaacagtcagatctcttcttcagcacccatatcagggatgcactcaata
agcagctcagaagatatcaagcccccgtttggcctcaggcccatgccagctcacagccct
ggactaatgttgtctcagaaacgcatgtgcgttatctgtggggaccgctcttctggcaag
cactatggagtgtacagctgtgagggctgcaaaggtttcttcaaacgaactgtgcgcaaa
gacctgagctatacctgcagggataacaaagagtgcctggttgacaaacgccagcgcaat
cgctgccagtactgccgctaccagaagtgcctggccatgggcatgaagagggaagtgatc
aaacatgtaaagtggataaaagaagatggaaaagatgagggatggatgacggtccaggag
gagcgccagaggaacagagagcgcgaaggagagctggagttcagtgtcggagtgaatgag
gagatgcctgtggagaagattttagaggcagagactgctgtggagcagaagaccgaactt
cactctgatggcggttctgcaggcaactctccccatgatgcagttaccaacatctgccag
actgcagacaaacagctttttgccttggtggagtgggcaaagagaatcccccatttctcc
gaactgccccttgatgaccaggtcatcctcctgcgtgcagggtggaatgagctcctcatc
gcctcgttctcccatcgctccattgctgtgaaggatggcgttctcctggcctctgagctg
cagcgagacagtgcacacagtgcaggagttggagccatttttgacagggagagtgtgcag
agtgcagaggtcggcgccatatttgaccgggtccttacggagcttgtcaataaaatgaga
gatatgcaaatggacaaaacagagctgggctgcctccgagccattgtcctcttcaaccca
gatgctaaagggctctccaacaccagtgaggtggagctccttagagaaaaggtctatgca
tcattggaagcttactgcaaacagaaatacccagagcagcagggaaggtttgctaagctc
cttcttcgactgccagcactgcgatccattggcttgaagtgcttggagcatctcttcttc
ttcaagttaatcggtgacacgcctattgacactttcctcatggaaatgcttgaagctccc
catcagttgtcttag
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