Micropterus salmoides (largemouth bass): 119897774
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Entry
119897774 CDS
T07309
Symbol
tnxba
Name
(RefSeq) tenascin
KO
K06252
tenascin
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04510
Focal adhesion
msam04512
ECM-receptor interaction
msam04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119897774 (tnxba)
04518 Integrin signaling
119897774 (tnxba)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119897774 (tnxba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
msam00536
]
119897774 (tnxba)
Glycosaminoglycan binding proteins [BR:
msam00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119897774 (tnxba)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fibrinogen_C
fn3
Fn3_Dep-1_3rd
Fn3_Dep-1_2nd
EGF_TEN
EGF_Teneurin
EGF_2
EGF_Tenascin
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
119897774
NCBI-ProteinID:
XP_038567655
LinkDB
All DBs
Position
Unknown
AA seq
1306 aa
AA seq
DB search
MLFTLGLLLLLTPFPSFQSTTNERRNSTGSNVTKSNAVFTLSKPKTTAALAKQAIRPTLK
PNTVNQTVLPTPVTTKSKPSPAVIQTTPSAAVKPTPISGTITNKDKHTVPVNQTVLTKSP
SASEVKATKDKHAPTPASSAKTIKDKLQTLVNQTVSIKSPSTGDGKATKDKNAPDTASSA
KNIKDKLQTLVNQTVSIKSPSTSDGKATKDKHSPAPASSAKTTKDKLQTSVNQTVSIKSP
SSSDGKATKDKPVPSVAQNVQSTSSKSVPVSSGKTTKNKPTASVNQTVAKSPPTSDVKNS
KEKPAPAQPIKVVISDGCESSNTKEQELKLKPGTPLVMTHKISLLPGGCTGGCEAEMATL
KGRLARLEREMSSLKEKCPCSANCPKDCSGNGECQKGKCICQQGFMGPDCSKCTQGVECN
KKAAKGKVKLTVETVTVQANKDKENLQDKTTKVEHALFQKVEQKTVSEAKETDTKPKVVT
NAKAGLNKTQSKQEASVKKITIKDSSSASKTSRPNVRQDLLKHEGRKHEEARKGKLTVLS
SKKFLQKTDSKTNRNSEQLKDEPPTKITQINMKKSNGTAKIVTILSKVVGTNKTRAGKET
LEQSTLAEKNVTQSSVHKPPKKVQSVDNRSSEAGKTGKEKVTQKSQYLVNATIAATPGEA
RMQNKTTVSGSGNAKRMGGSGLGSVKVVNVSSYSFTVTWAAPQGMFKNFTVIRREPRTED
DVDDHEEFEEEALEGDKASAAKNTTEVQVQSESTNTTAASGKAVGSRGKGETKRISMVVP
GSVRSVEFSNLRANTGYVLHIYGTATERKSKIHRVTAITGPEPATEMVFSNVTESSLSVS
WSKPKTTFAGCRVTFTNIVTGESRFVTVDSQQSSVVLSKLSAGSSYIISLTTTKGRAQSD
ALTSVITTVPAPPTHLQVVNVTDTRAVLQWTPSLGKVDRFIISYESAKTPNVTVTVMLAG
NSVEHHLRGLQRGTLYTVKVLSQKDSLQSMAITTTFTTANVVKASEVGARSAVIAWKAST
VVYHSYRLIYQVAGEETKEVILDPSTTEYKLTGLLSMSRYIVLVQGERDGHYTPVVTTEF
ITGKLRFPFPTECSQELLNGALQSGEVDIYPQGKEGRAVRVYCDMESDGGGWTVFQRRMN
GNTDFYRTWSEYSAGFGNLSEEFWLGNELLHNLTSVGPVSLRVDLRSGNDTAYAHYANFS
IDSADRHYTLTVSGYTGTAGDSMRYHNGRPFSSRDKDPDPLGIHCARAYMGGWWYKNCYK
TNLNGLYGISSNNQGIVWIDWKGKDSSIPFTEMKFRPSRFSPATHG
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atgctgtttactctaggacttctcctccttctcaccccatttccctcttttcaatccacg
accaatgagaggagaaactcgacaggaagcaacgtgacaaaatccaatgctgttttcacc
ctgtcaaaaccaaaaaccactgctgctcttgccaaacaggccattcgcccaaccctaaag
ccaaacacagtcaatcagactgttttacccactccagtgaccaccaaaagcaagcccagc
ccagcagtaattcaaaccactccgtcagcagcagtaaagcctactccaatcagtggcacc
atcaccaacaaagacaagcacacggtcccagtcaatcagactgttttaactaaatctccc
tcagccagtgaagtgaaggctaccaaagacaagcatgctcccactccagccagcagtgct
aaaaccataaaagacaaactccaaactttagtcaatcagactgtttcaataaaatctcct
tcaactggtgatggaaaagctaccaaagacaagaatgcccccgatacagccagcagtgct
aaaaacataaaagacaaactccaaactttagtcaatcagactgtttcaataaaatctcct
tcaactagtgatggaaaagctaccaaagacaaacattcccctgctccagccagcagtgct
aaaaccacaaaagacaaactccaaacttcagtcaatcagactgtttcaataaaatctcct
tcatctagtgatgggaaggctaccaaagacaagcctgtccccagtgtagctcaaaatgtt
cagtcaacatcctcaaagtctgttcctgtcagtagtggtaaaaccaccaaaaacaagccc
acagcctctgtcaatcagactgtagctaaatcgccccctaccagtgatgtgaagaactcc
aaagaaaagcctgcccctgcacaaccaatcaaggtggtcatcagtgatggctgtgaatca
agcaacaccaaggagcaggaactgaagctgaagcctggcactcctttggtgatgacgcat
aagatcagcttgttgcctggtggctgcaccgggggatgtgaggctgagatggctacgctg
aaaggacgtcttgcccgactggaaagagagatgtcctccctaaaagagaaatgtccatgt
tctgcaaattgtccaaaagactgtagtggcaatggagaatgtcaaaaggggaaatgtatc
tgccaacagggattcatgggtccagactgcagtaaatgtacacaaggagttgagtgtaat
aaaaaagctgccaaaggaaaggtaaagttaactgtggaaacagtgaccgtacaggcgaat
aaagacaaggaaaacctgcaggacaaaaccaccaaagtagagcatgcactcttccagaag
gtggagcagaagacggtgtctgaagccaaagagactgacactaaacccaaagtggttact
aatgctaaagcaggtctaaataaaacacaatcaaaacaagaagcctctgttaagaaaata
actattaaggactcttcaagtgcctcaaagaccagtcgcccaaatgtccgtcaagatctg
ttgaaacatgagggaagaaagcatgaagaggcccgcaaaggcaaactgacagtcctgagc
tctaaaaagttcctccaaaaaactgacagtaaaacaaatcgtaattctgaacaactaaaa
gacgaacctccaaccaagataacccagattaacatgaagaaatctaatggcacagctaaa
attgtgaccattctgtccaaggttgtgggaacaaacaaaacgagagcagggaaggagacc
ttggagcagtccacgctggctgagaagaatgtaactcagtcatctgtacataaaccccct
aagaaagtgcagtctgttgacaacagaagctctgaagctggcaaaacaggaaaagagaaa
gttacacagaagagtcagtatttagtgaatgcaaccattgcagcaacaccaggcgaggct
cgaatgcagaacaaaacaactgtcagtggctcggggaacgcaaagaggatgggaggatct
ggattaggttctgtaaaggttgtaaacgtctcatcctacagctttactgtcacgtgggca
gcaccacaagggatgttcaagaacttcaccgtgatcagaagagagcctcggacagaggat
gatgtagacgaccatgaggagtttgaagaggaagctcttgaaggagacaaggcctccgca
gcaaagaacacaactgaagtccaggtacagagtgagagcaccaacacgactgctgcctct
ggtaaagctgttggatctagaggcaaaggtgaaaccaagaggatctctatggtggtccct
ggcagcgtacgctctgtggagttcagtaaccttcgggcaaacacaggctatgtcctgcac
atatatggtactgcaactgagagaaaatcaaagattcacagagtaactgcaattacaggt
cctgagccagccacagagatggttttcagcaatgtaacagagtcttctctcagtgtttcc
tggtccaaaccaaagaccacattcgcaggctgcagggtcacattcaccaacattgtcaca
ggagagagccgctttgtgaccgtggactctcagcaatcttccgtggttctgtccaagttg
tctgctggatcctcctacataatttctttaactactacaaaaggcagagcgcagagtgac
gccctcacatccgttatcaccacagtgcccgcccctccgacacatctacaagttgtcaat
gtgacagataccagagctgtgctgcaatggacacccagtctggggaaagtagaccgcttc
atcatcagctatgagtccgccaagactcctaatgtgacagtgacagtgatgctcgccgga
aactcagtggagcaccatttgagaggcctgcagagaggcaccttgtacacagtcaaagtc
ctgagccagaaggacagtctccagagtatggctatcacaactacatttaccacagctaat
gtggttaaagccagtgaggtgggtgctcgctccgcagtgatagcatggaaagcttccact
gttgtttatcacagttacagactgatctaccaagtggcaggagaggagacaaaggaggtg
atcctggacccatccaccactgagtacaagctgacgggactgttgtcaatgtcacgctat
attgttctggtacaaggcgagagagatgggcactacacaccggttgtcaccacagaattc
atcacaggcaaactgcgtttccccttccctactgagtgctctcaggagctgctgaatgga
gctctgcagtcaggagaggtggatatctacccgcaaggaaaagagggacgagcagtcaga
gtctactgtgacatggagagtgacggaggcggctggacggtgttccagaggaggatgaat
ggaaacacagacttctacagaacctggagtgaatatagtgctggctttggaaacctcagc
gaagagttctggctcggaaatgagcttcttcacaacctaaccagtgtcggccctgtgagt
ctgagagtggatttgcgatctggaaatgacactgcctacgctcactatgccaacttctcc
attgattcagcggacaggcactatacccttacagtgtctggctacactggaactgcaggt
gactctatgaggtaccataatgggcgtccattctcctcccgggacaaggaccctgatcct
ctggggatccactgtgccagggcctacatgggaggctggtggtacaagaactgctacaag
accaaccttaatggtctttatggcatcagcagtaataatcagggaatcgtctggatagac
tggaaaggtaaagactcctccattcctttcactgagatgaagttcagaccgtccaggttc
tctcctgcaactcatggctaa
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integrated database retrieval system