KEGG   Micropterus salmoides (largemouth bass): 119897828
Entry
119897828         CDS       T07309                                 
Symbol
xpo1a
Name
(RefSeq) exportin-1
  KO
K14290  exportin-1
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam03008  Ribosome biogenesis in eukaryotes
msam03013  Nucleocytoplasmic transport
msam03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:msam00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    119897828 (xpo1a)
   03008 Ribosome biogenesis in eukaryotes
    119897828 (xpo1a)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    119897828 (xpo1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msam03019]
    119897828 (xpo1a)
   03009 Ribosome biogenesis [BR:msam03009]
    119897828 (xpo1a)
   03016 Transfer RNA biogenesis [BR:msam03016]
    119897828 (xpo1a)
   03036 Chromosome and associated proteins [BR:msam03036]
    119897828 (xpo1a)
Messenger RNA biogenesis [BR:msam03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     119897828 (xpo1a)
Ribosome biogenesis [BR:msam03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    119897828 (xpo1a)
  Pre-60S particles
    119897828 (xpo1a)
Transfer RNA biogenesis [BR:msam03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    119897828 (xpo1a)
Chromosome and associated proteins [BR:msam03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     119897828 (xpo1a)
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N TPR_TNPO3_IPO13_2nd BspA_v OS-C_C
Other DBs
NCBI-GeneID: 119897828
NCBI-ProteinID: XP_038567744
LinkDB
Position
Unknown
AA seq 1066 aa
MPAEMTMLADHPARQLLDFNQKLDINLLDNVVNSMYHDIGSQQRVAQEVLTNLKDHPDAW
TRVDTILEFSQNMKTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPANM
EKEGVYISKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVNQYEEQFVNLFTLTMSQLKQMLPL
NTNIRMAYANGKDDEQNFIQNLSLFLCTFLKEHGQLVEKRPNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTASTPLLSDVPPRRHLYLPVLSQVRLLMVSRMA
KPEEVLVVENDQGEVVREFMKDTDAINLYKNMRETLVYLTHLDYADTERIMTEKLHNQVN
GTEWSWRNLNMLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAIIASNIM
YIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFVQVQVG
EVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQELLIEKYMLLPNQVW
DSIIQQATKNVDILKDAETVRQLGSILKTNVRACKAVGHPFVSQLGRIYLDMLNVYKCLS
ENISSAVQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPLLEAVL
IDYQRNVPAAREPEVLSTMATIVNKLGVHITGEIPKIFDAVFECTLNMINKDFEEFPEHR
THFFYLLQAATSQCFPAFLSIAPAQFKLILDSIIWAFKHTMRNVADTGLQILYTLLQNVS
GEEAAAQSFYQTYFCDVLQHIFSVVTDTSHTAGLTMHATILAYMFNLVEEGKVSVALSAA
SPANNQAHVQEYIANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLVQIKEF
AGEDTTDLFLEERETSLRQAQEEKHKLQMSVPGILNPHELPEEMCD
NT seq 3201 nt   +upstreamnt  +downstreamnt
atgccagcagaaatgacgatgttggccgatcacccagccagacagctgctggacttcaac
cagaaactggacataaacctgttggacaatgttgtcaactcgatgtaccacgacattgga
tcgcagcaacgggtggcccaggaagttctcaccaacctgaaggatcatccagacgcctgg
acgagggttgacaccatcctggagttctctcagaacatgaaaactaaatattatgcactg
cagattctggagacggtcatcaaaacacgctggaagattctccctagaaatcagtgtgaa
ggcatcaagaaatacgttgttgggttgatcatcaagacttcttctgatcctgcaaacatg
gagaaagagggagtttacatttcaaaactcaacatgatcctcgtacagatcctgaagcag
gaatggcccaaacactggcccacgttcatcagcgatattgtgggagcaagtcggaccagc
gagagcctctgtcagaacaacatgatcatcctgaaactgctcagcgaggaggtttttgat
ttctccagtggccagatgacccaagtgaaggccaaacacctcaaagacagcatgtgcaac
gagttctcccaaatattccagctgtgccagtttgtgatggaaaactcccagaatgcccca
ttggtccatgccacgctggagactctcctccgcttcctgaattggattcctttaggctac
atctttgaaacaaaactcatcagcactctggtctacaagttcttgaacgtgcccatgttc
cgcaatgtgacgctgaaatgtttgacggagattgccggagtaagcgtcaaccagtacgag
gagcagttcgttaacctgtttaccctcactatgagccagctcaaacagatgctgcctttg
aacactaacatcagaatggcctacgccaacggtaaggacgacgagcagaacttcatccag
aacctcagcctgttcctctgcaccttcctcaaagaacacggccagctcgtcgagaagaga
cccaacctgcgagagacgctcatggaggccctgcactacatgctgctggtgtcagaggtg
gaggagaccgagatctttaagatttgtctggagtactggaaccacttggcggcagagctt
tacagagagagtcccttctccaccgctagcaccccgctgctgtcagacgtcccacctcgc
agacacctgtacctgcctgtactctcccaggtgcgtttgctgatggtgagccgcatggcc
aaacctgaggaggtgctggtggtggagaacgaccagggggaggtggtcagggagttcatg
aaggacacggatgccattaacctttacaagaacatgagagagactcttgtgtatctgacc
catctggactacgccgacactgaacgcatcatgacggagaagctccacaaccaggtgaac
ggcaccgagtggtcgtggaggaacctgaacatgctctgctgggccatcggctcaatcagc
ggggcgatgcacgaggaagacgagaagaggttcctggtcaccgtcatcaaggacctgctc
ggcttgtgtgagcagaaacgagggaaggacaacaaggccatcatagcctccaacatcatg
tacattgtgggccagtatcctcgcttccttcgagcccactggaagttcctcaagactgtc
gtcaacaagctgtttgagttcatgcacgagacccatgacggtgtgcaggatatggcgtgt
gacaccttcatcaagatcgcccagaagtgccggcgtcattttgtccaggttcaggtggga
gaggtgatgcccttcatcgatgagatcctcaacaacattaacaccatcatctgtgacctg
cagccacagcaggttcatacgttttatgaggctgttggctatatgattggagctcagaca
gaccaggcagttcaggagcttctgatagagaagtacatgctgctgcctaaccaggtgtgg
gacagcatcatccagcaggccaccaagaacgtggacatcctgaaggacgctgagacggtg
cgtcagctgggcagcatcctaaagacaaacgtcagagcctgtaaagctgttggtcatccc
tttgtttcccagctgggacgaatctacctggacatgctcaacgtctacaagtgcctgagc
gaaaacatctcctcggctgttcaaaccaacggtgagatggtgaccaaacagcctctgatc
aggagtatgaggactgtaaagagggagacattgaagctgatctcaggctgggtcagtcgc
tccaacgaccctcagatggtgggagagaactttgtgccccccctgctggaggcggtgctc
atcgactaccagaggaacgtcccggccgccagagagcccgaggtcctcagcaccatggcg
acgattgtcaacaagctgggagtccacatcacgggagaaatccccaagatctttgacgct
gtctttgagtgcactttgaacatgatcaacaaggactttgaagaattcccagaacacaga
acccatttcttctacctccttcaagctgccacctcccagtgcttcccagccttcctgtcc
atcgcccctgcccagttcaaactgatcctagactccatcatctgggcattcaagcatacg
atgaggaatgtggccgacacaggtcttcagatcctgtacactctcctgcagaacgtttct
ggagaggaggcagcagcacagagcttctaccagacgtacttctgtgacgtcctgcagcac
attttctctgtggtcactgatacctctcacactgcaggtctgaccatgcacgccaccatc
ttggcctacatgttcaacctggtggaggaggggaaggtcagtgttgctctgagtgccgcc
agtcctgccaacaaccaggcgcacgtccaggagtacatcgccaacctgctgaagacggct
ttcccccatctgcaagatgcccaggtgaaggtgtttgtaacgggtctgttcagcctaaat
caggacatccccgccttcaaggagcacctgagggacttcctcgtgcagatcaaggagttt
gctggcgaggacacgacggacctgttcctggaggagagggagacgtccctgcgccaagct
caggaggagaaacacaagctccagatgtcagtgcccggcattctcaaccctcacgagctt
ccagaggagatgtgcgactga

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