Micropterus salmoides (largemouth bass): 119897972
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Entry
119897972 CDS
T07309
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119897972 (taf5l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msam03021
]
119897972 (taf5l)
03036 Chromosome and associated proteins [BR:
msam03036
]
119897972 (taf5l)
Transcription machinery [BR:
msam03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119897972 (taf5l)
Coactivators
SAGA/TFTC/STAGA complex
119897972 (taf5l)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
119897972 (taf5l)
STAGA complex
119897972 (taf5l)
TFTC complex
119897972 (taf5l)
SAGA complex
119897972 (taf5l)
SLIK complex
119897972 (taf5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
TFIID_NTD2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
RMC1_N
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_WDR19_1st
WD40_like
PEP5_VPS11_N
PROPPIN
Nbas_N
WD_LRWD1
Beta-prop_IP5PC_F
Lysis_col
Motif
Other DBs
NCBI-GeneID:
119897972
NCBI-ProteinID:
XP_038567968
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MKRVRTEQIQYAVAQYLKRRQYVDTDGSLKGAKLFQSAEEMAASLTVQTESGCANIVSAA
PCQSDPQQYETQYSRLRSFLSETEISWAKEVSSILYPLFVYLHLDMVRCGLKGAVDGFYS
RFHSAFLQDSEQRATVEQLRHVLTAQDVAANPKLSSFLEHKYVVHLTEPAYSYLLRYLQS
EDNSAICRALSTHLQVEVTASRRTDYQLYGAASGATAATNSTSSWAGVDGADGGEGVEVP
AGIPQSEAALEALQDCIKKVREGPPTLTTVCFYAFHHTEQMLNTAEVSADSRLLAAGFDS
STVKLWSLRARKLKAKPHQADVSRIHLACDVLEEEVDEEDGSGSEIKTLRGHSGPVFRTA
FLTDGSGLLSCSEDTTIRYWDLGNFTNMVLYQGHAYPVWDVDISPCSLYFASGSHDRTAR
LWTFSRTYPLRLYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGASVRLFTGHRG
PVLSLAFSPNGKYLASAGEDQRVKLWDLASGTLFKDLRGHTDSVTSLSFSPDSSLVASSS
IDNSVRVWDIRNSHGGTPADGSSSELVGLYTGNTSNVLNVQFMACNLLLVTGTAQEKTEQ
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgggttcgcacggagcagatccagtatgccgtggctcagtacctgaagcggagg
cagtatgtggacaccgatgggtccctgaaaggagccaagctcttccagtcagcggaggag
atggctgccagcctcacagtgcagacagagtcgggttgtgccaacatcgtctctgcagct
ccctgccagtctgacccacagcagtatgagactcagtactccagactgcgctcctttctg
tcagaaacagaaatatcctgggcgaaggaggtgagcagcatcctctacccgctcttcgtc
tacctccacctggacatggtgcgctgcggcctgaagggggcggtagatggcttttacagt
cgtttccacagcgcctttcttcaagacagcgaacagcgtgccaccgtagaacagctccgc
catgttctcaccgctcaggatgttgcagccaaccccaagctcagttctttcctggagcac
aagtacgtggttcacctgacagagccggcctacagctacctgctgcgttacctgcagagt
gaggacaacagtgccatctgcagggccctcagcacacacctacaggtggaggtcaccgcc
tccaggcgtacagactaccagctgtacggagctgccagcggggcgactgcagccacaaac
tcgacctcctcctgggctggagtggatggggcagatggcggtgagggggtggaggtcccc
gcagggatcccacagagcgaggcggccctggaggctctgcaggactgcattaagaaagtc
cgtgagggcccccccacgctcaccaccgtgtgcttttacgctttccaccacacagagcag
atgttgaacactgcagaagtctcggccgacagccggctgctggccgccggctttgacagc
tccacggtgaagctgtggagcctccgagccaggaagctgaaggccaaaccgcatcaggct
gacgtgtcacgcatccacctggcctgtgacgtactggaggaggaagtggatgaagaagac
gggtccggcagcgagataaagacactgcgaggtcacagcggcccggtgtttcgtactgcc
ttcctgacagacggctccggcctgctctcctgctctgaggatacgaccattcgctactgg
gacttgggtaacttcaccaacatggtgctctaccagggccacgcttacccagtgtgggac
gtagacatcagcccctgcagcctctactttgccagcggctcccacgaccgcacggcccgc
ctctggacgttctcccgcacctacccgctgcggctctacgccgggcatcttgcagacgtc
gactgtgtcaagtttcatcccaactccaactacctggctaccggctccacagacaagact
gtccggctgtggagcacccagcagggggcgtctgtccgcctcttcaccggccaccgaggc
ccggtgttgtcactcgctttctcacctaacgggaagtacttggcgtccgccggcgaggac
cagagggtgaagctgtgggacttggcttcggggacgttgttcaaagacctgcggggacac
acggacagcgtcaccagcctgtctttcagtccagacagcagcctggtggcgtcgtcgtct
atagacaactcagtccgggtgtgggacatccggaactcccacggcgggacaccagcagat
ggctcgtccagtgaactggtgggactgtacactggaaacaccagcaacgtgctgaacgtc
cagttcatggcctgcaacctgctgctggtgacgggaaccgcacaagagaaaacagaacag
tag
DBGET
integrated database retrieval system
