Micropterus salmoides (largemouth bass): 119898042
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Entry
119898042 CDS
T07309
Name
(RefSeq) collagen triple helix repeat-containing protein 1-like isoform X1
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
msam03037
]
119898042
Cilium and associated proteins [BR:
msam03037
]
Other cilia and associated proteins
Stereociliary proteins
119898042
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
119898042
NCBI-ProteinID:
XP_038568082
LinkDB
All DBs
Position
Unknown
AA seq
256 aa
AA seq
DB search
MMSPLVARLLLLVCLALPLNCVEKVRNRGYRKDPDADKCTGNDAEKPNCTLHSGEGRSTY
LNKMYGSCMQGPQGNPGREGNPGTNGIPGTPGIPGRDGLKGEKGECINEIFEEPWRPNYK
QCAWNSLNYGIDLGKVADCTFTKLRSDSALRVLFSGSLRLKCKNACCQRWYFTFNGAECT
GPLPVESIIYLDQGSPELNSTINIHRTSSVEGLCEGVKAGLVDVAVWVGTCADYPRGDAS
TGWNSVSRIIIEELPK
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctcctcttgttgcccgcctgcttctccttgtgtgcctggcgttgcctcttaat
tgcgtggaaaaggtgagaaatagaggataccgaaaggatcctgacgctgacaagtgcaca
ggaaatgatgcagaaaagcccaactgcactttacactctggagaaggaagatctacttat
ttgaacaaaatgtatggcagttgcatgcaggggcctcaaggcaaccctggcagagagggt
aaccctggaaccaatggcatcccggggactccgggcatccctggtcgtgacgggctcaaa
ggtgagaaaggcgagtgcattaatgagatcttcgaggagccatggaggcccaactacaag
cagtgtgcctggaactccctgaattatgggattgacctgggtaaagtagctgactgtacg
ttcaccaagctacgctcagacagcgccctcagagtcctcttcagtggttccctcagactc
aagtgtaagaacgcatgctgccagaggtggtacttcaccttcaacggagcagagtgcacg
gggcccctgcccgtagagtccatcatctacttagaccaaggaagtcctgagctcaactca
accatcaacatccacagaacatcgtcagttgaaggcctgtgtgagggtgtcaaagcaggg
ttggtggatgtggccgtgtgggtggggacctgtgctgactaccccaggggtgacgcatct
acagggtggaattcagtatccagaattatcattgaggaactgcccaaataa
DBGET
integrated database retrieval system
