KEGG   Micropterus salmoides (largemouth bass): 119898094
Entry
119898094         CDS       T07309                                 
Symbol
seh1l
Name
(RefSeq) nucleoporin SEH1
  KO
K14299  nucleoporin SEH1
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam03013  Nucleocytoplasmic transport
msam04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:msam00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    119898094 (seh1l)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    119898094 (seh1l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msam03019]
    119898094 (seh1l)
   04131 Membrane trafficking [BR:msam04131]
    119898094 (seh1l)
Messenger RNA biogenesis [BR:msam03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     119898094 (seh1l)
Membrane trafficking [BR:msam04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    119898094 (seh1l)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_WDR3_2nd WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 WDR55 EIF3I Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 119898094
NCBI-ProteinID: XP_038568178
LinkDB
Position
Unknown
AA seq 415 aa
MFVARSIAADHKDLIHDVSYDFHGRRMATCSSDQSVKVWDKSENGEWHCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGLSHWIKRTTLVDSRTSVTDVK
FAPKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHPP
MFAVGSDDSNVTYGGKVQIYEYNENTRKYAKAETLMTVTDAVHDIAFAPNLGRSFHVLAI
ATKDVRIFKLVPMRKETTSTGPTKFEVQIVAQFDNHNSQVWRVSWNITSTLLASSGDDGC
VRLWKANYMDNWKCTGILKGDGSPLTGSSGQPTAMSTVVGSSVQTSQNALNGMSAGRYFF
PPLDPPRAGTRYGHLLPPPSLIEHCDAEPIQPQQQALPHRHSSRALLPLPEAEGQ
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgtttgtagcgcgtagtatcgcagcagatcataaagatctaattcacgatgtgtcgtat
gattttcacggccgcagaatggcaacttgctccagtgatcaaagtgtcaaggtttgggac
aaaagtgagaatggagagtggcactgcacagccagctggaagacacacagcggatcagtg
tggagagtgacctgggctcatccagaatttgggcaggttctggcatcctgctcctttgac
aggacagctgctgtctgggaggagattgttggggagtccaatgacaagcagagaggactg
agccactggataaagagaaccacactagtggacagtaggacgtcagtgactgatgtgaaa
tttgcccctaaacacatgggcctcatgctgaccacctgctcagcggacggagtggtgagg
atctacgaggctcctgatgtgatgaacctaagtcagtggtccctgcagcatgagatctca
tgcaagctcagctgcagctgcatttcttggaacccctcaagctctcgtgcccacccgcca
atgtttgcagtggggagtgacgacagcaacgtaacgtacggtgggaaagtacagatctat
gagtataatgaaaacacaaggaaatatgctaaagcagagacgctgatgaccgtcactgat
gcagtccatgacattgcatttgctccaaacctgggaagatctttccacgtgctcgccatt
gcaactaaagacgtcagaatcttcaagcttgtgcctatgaggaaggagaccacctctaca
ggacccaccaagtttgaggtgcagattgtggctcagtttgacaaccataactcccaggtg
tggcgtgtgagctggaacatcaccagcaccctgctggcctcttccggggatgacggctgt
gttcgcctctggaaagcgaactacatggacaactggaagtgcacaggcatcctgaaggga
gacggcagcccactcactggctcgtctggtcagcccacagccatgagcaccgtggtgggc
tcgtctgttcagacctcccagaacgccctgaacggcatgtctgcaggaaggtatttcttt
ccgcctctggatcctcccagagcggggaccaggtacggtcacctgctgcctcccccctcc
ctcatagagcactgtgatgctgagcccattcagcctcagcaacaggctctcccccacaga
cactcctctagggcactgctgcccttaccagaggctgaagggcagtga

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