Micropterus salmoides (largemouth bass): 119898275
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Entry
119898275 CDS
T07309
Symbol
si:ch73-86n18.1
Name
(RefSeq) LOW QUALITY PROTEIN: C-type lectin domain family 4 member E
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
119898275 (si:ch73-86n18.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
msam04054
]
119898275 (si:ch73-86n18.1)
04091 Lectins [BR:
msam04091
]
119898275 (si:ch73-86n18.1)
Pattern recognition receptors [BR:
msam04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
119898275 (si:ch73-86n18.1)
Lectins [BR:
msam04091
]
C-Type lectins
Asialoglycoprotein and DC receptors
119898275 (si:ch73-86n18.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lectin_C
Motif
Other DBs
NCBI-GeneID:
119898275
NCBI-ProteinID:
XP_038568391
LinkDB
All DBs
Position
Unknown
AA seq
262 aa
AA seq
DB search
MIVYVRLFACTLVLYLHVYTLLSVSSGTLRIRGHIILYVLISLLVSEASSQTADSLXGEL
SSVKLKLNLLKNHYRHLSNVFFNLASNCSAPGACADEXLHVGDQYFFLSTDKQKWXNSTD
ICTEIGNHLAILTTREQHEAVEKEGRRKGGFYTNYWTGLTDSESEGDRKWVANSTINNLF
MGNFEPDNNLSGGVDEEDCVVDSYTQSWYDVPCSFFYLRICQMDAIPPPYTPTTPLHDHH
SIMKDIDSLFKKFSGHHFYSFS
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgattgtatatgtgcgtctgtttgcatgtactctagtgttgtatctgcatgtttatact
ttgctatctgtctcttcaggcaccctgagaatcagaggccacatcatcctctatgttctc
atcagcctgttggtttctgaagcttcttctcagactgcagacagtctatagggagagctg
tcctctgtaaagctgaaactaaaccttctaaagaatcactacagacacctgtctaatgtt
ttcttcaacctggcatccaattgctcagctccaggtgcttgtgctgatgagtagcttcat
gtaggggatcaatacttcttcctcagtactgataagcagaagtggtaaaatagtacagat
atatgcacagagataggcaatcatcttgccattttaaccaccagagagcaacatgaagct
gttgaaaaagaaggcaggaggaagggagggttttacacaaactactggactggactgact
gacagtgagagtgaaggtgacaggaaatgggtggccaactcaacaattaataatctattc
atggggaatttcgagccagacaacaacctgtcgggtggggtggatgaagaggactgtgtg
gtggacagctatactcagagctggtatgatgttccctgttccttcttctatcttagaata
tgtcagatggatgccatcccacccccatacacccccaccacaccactgcacgaccaccac
tcgattatgaaagatattgattctttatttaaaaaattcagtggccaccatttttatagt
ttctcttaa
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integrated database retrieval system
