Micropterus salmoides (largemouth bass): 119898483
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Entry
119898483 CDS
T07309
Name
(RefSeq) LOW QUALITY PROTEIN: ryanodine receptor 3-like
KO
K04962
ryanodine receptor 2
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04020
Calcium signaling pathway
msam04260
Cardiac muscle contraction
msam04261
Adrenergic signaling in cardiomyocytes
msam04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
119898483
04020 Calcium signaling pathway
119898483
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
119898483
04261 Adrenergic signaling in cardiomyocytes
119898483
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msam04040
]
119898483
04990 Domain-containing proteins not elsewhere classified [BR:
msam04990
]
119898483
Ion channels [BR:
msam04040
]
Voltage-gated cation channels
Ryanodine receptor
119898483
Domain-containing proteins not elsewhere classified [BR:
msam04990
]
EF-hand domain-containing proteins
Other EF-hand domain-containing proteins
119898483
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RYDR_Jsol
RyR
RYDR_ITPR
SPRY
Ago_Mid
Motif
Other DBs
NCBI-GeneID:
119898483
NCBI-ProteinID:
XP_038568586
LinkDB
All DBs
Position
Unknown
AA seq
2030 aa
AA seq
DB search
RTYAVKTGXWYFEFEAVTGGDMKVGWARPGCKPDVELGTDELAFVFDGYKGHCLNMGSRL
FGRCWHAGDVVGCMINMEDKSMIFTLNGEILITTKGSELCFTDFETEDGFIPVCSLGLAQ
VGRMNLGKDASTFKYYTMCGLQEGFEPFSVNMNREVTMWFSKRLPTFVNVPKDHNHIAVT
RIDGTIDSPPCLKVTHKTFGTQNSNADMVFCRLSMPVEFHSVFKSSPVVDMNGVHEEDTL
KVKHRYPLRSVRHSEESRRVDYSSITTYYHSVRVFAGQDPACVWVGWVTPDYHYYSNNFN
LGKNRTVTVTLGDERGRVHESVKRSNCYMVWGGDVTNPAHTSSRSNVDLEIGCLIDLSTG
LVTFTINGKEISTSYQVEPNTKLFPAVFVRPTSPNLFQFELAKIKNAMPLSSAIFKSEHK
NPVPQCPPRLDVQTINAVLWSRMPNTFLKVETARVNERHGWVVQCVEPLQMLAVHIPEEN
RCVDIMELSEQEDLRTFHYHTLKLYCALCALGNTRVAHALCSHLDQSQLLYTIDNQYLSG
MLREGFYNVLISIHLETAKEARLMMKDEFIIPVTAETRSIRLFSDASKKHLPPGVGLSTS
LKPRLNFAPPCFISTKREQHLYSPQIPLDALKEKANSMLTEAVQGGGHHIRDPVGGCVEY
QFVPILKLVSTLLTMGVLGSEDVHQILLLIDPNVFRETRQEGATGATDKEGLTGAEDKAV
EAGEEEAAKDTKQPIKGLLEKRLPEPVKRQMCELLHYFCDCELKHRIEAIVSFSDSFVSK
LQHNQKYRYNELMLALNMSAAVTAKKTKEFRSPPQEQINMLLTFSVGEDCPCPADIQEEL
YDFHNQLQLHCGIPMEEDDDEQDTSIKGRLLMLVNKIKSQSHKAEEPTEKEQAAPSNLKE
LISQTMVSWAQECHILDPELVRKMFSLLRRQYDSIGELLRAMRKTYTISAASVQDTINLL
ASLGQIRSLLSVRMGKEEEKLMIDGLGDIMNNKVFYQHPNLMRILGMHETVMEVMVNVLG
GDKSQEIAFPKMVASCCRFLCYFCRISRQNQKAMFDHLSYLLENSSVGLASPAMRGSTPL
DVAASSVMDNNGLALALEEPDLDKVVTYLAGCGLQSCPMLLAKGYPDIGWNPIEGERYLS
FLRFAVFVNGESVEENSSVVVKLLIRRPECFGPALRGEGGNGLLAAMKEAIKISETPALD
LPGSVHGVSSDVSADGDDEEEVVHMGNAIMSFYSALIDLLGRCAPEMHLINKGKGEALRI
RAILRSLVPTEDLVGIISIPLKMPITNKDGSVTEPDMSACFCPDHKAPMVLFLDRVYGIE
DQSFLLHLLEVGFLPDLRAATSLDTEGLCTTETALAMNRYIGSALLPLLTRCAPLFAGTE
HYATLIDSTLHTIYRLSKGRSLTKAQRDAIEECLLAVCKHLRPSMLQQLLHRLVFDVPLL
TDYCKMPLRLLTNHYEQNWKYYCLPSGWGSYGTASEDELLLTKKIFWGVFDSLSQRKYDP
ELFKMAMPCLSAIAGALPPDYVDASISTTVEKPVSVDAQGNFDPRPVNTANISLPEKLEH
FANKYAEHSHEKWSAEKVLLGWKYGDCVDEKAKTHPQLRTYKALTEKEKEIYRWPIRESL
KSMLAMGWSIDRTKDGESMSQQRESEKMRKISQASQANGFNPSPTDTSNVVLSRELQGMV
ELVAENYHNIWAKKKKSDLGSRGGGTHPLLVPYETLTAKEKARDREKAQDLFRFLQINGY
SITRGLKDLEHDSSSMEKRFAYKFLKKLLKYVDSAQEFIAHLEAMAASGKTDRSPHEQEI
KFFAKVLLPLIDQYFKNHSLYFLSSPNKNLSSSGYASNKEKEMVTSLFCKLAALVRHRIS
LFGSDSTTIVSCLHILAHTLDTRTVMKSGSELVRVGLRTFFENAAEDLEKTFENLKLGKF
THSRSQMKGVSQNINYTTVALLPILTALFEHITQHHFGVDLLLDDVQVSCYRILTSLYAL
GTGKKSIQLPALGHCLATLAGAMPVAFLEPLLNTYNPCSVFNTKSARERA
NT seq
6093 nt
NT seq
+upstream
nt +downstream
nt
agaggacatatgcggtaaagaccgganaatggtactttgaatttgaggctgtgacgggag
gagacatgaaagtgggctgggccagacctggatgtaagccagacgtggagcttggcacgg
atgagcttgctttcgttttcgatggatataagggtcactgtctgaacatgggcagccgct
tgttcgggcggtgctggcatgctggggatgtggtgggctgtatgatcaacatggaggaca
agtccatgatcttcacccttaatggagagatcctcatcaccaccaagggatctgaactct
gcttcactgactttgaaactgaggatggatttattccagtgtgtagtctcggcctggctc
aggtgggtcgaatgaatctggggaaagatgcaagcaccttcaagtactacaccatgtgcg
gcctgcaggaaggatttgaacccttttctgtcaacatgaaccgagaggtcactatgtggt
tcagcaagcgtctgcccacttttgtcaacgtgccgaaggatcacaaccacatcgcagtaa
ccaggattgacggcaccatcgacagccccccatgtcttaaagtcacccacaagacgttcg
gcacccagaacagtaatgctgatatggtgttttgtcgcctcagcatgcctgtagagttcc
actccgtcttcaaatccagtcctgttgtagacatgaacggagtgcacgaggaagacacac
ttaaagtcaaacacagatatccattgagatctgtgaggcacagtgaggagagcagaagag
tggactacagcagcatcactacgtactaccactcggtaagggtctttgctggtcaggacc
ctgcctgtgtgtgggttggatgggttacccccgactaccattactatagcaacaacttca
acctcggtaaaaaccgtacagtcaccgtaaccctgggtgacgagcgaggacgagtccatg
agagtgtgaagaggagtaactgctacatggtgtgggggggcgatgtgaccaacccggctc
acacctcaagtcgcagcaacgtggacctggagattggctgtctgatagacctgtccaccg
gtctggtgacattcaccatcaatggcaaagagatatccacatcctaccaggtggaaccaa
acaccaagcttttccctgcagtgttcgtgcgacccaccagccctaacctcttccagttcg
agctggctaaaataaagaatgccatgcctctgtcatcagccatctttaagagtgaacata
agaacccggtgccccaatgtccaccccgtctagatgtccagaccatcaatgcagtgctgt
ggagccgcatgcccaacaccttcctcaaagtggaaacagccagggtgaatgagagacacg
gctgggtggtccagtgtgtggagcccctgcagatgttggctgtacacatacctgaggaga
acaggtgtgttgacatcatggagctgtctgagcaggaggacttgaggacgttccattacc
acacactgaagctctactgtgcactctgtgctctgggcaacacccgtgtggcccatgccc
tctgcagccacctggaccaatcacaactcttgtacaccatcgacaatcagtacctgtcag
gcatgttacgggagggcttttacaacgtcctgatcagcatccacctggagacagccaaag
aggcacggctcatgatgaaagatgagttcatcatcccggtcacggctgagacacgttcca
ttcgcctcttctctgacgcttccaaaaagcacctcccgccaggggtggggcttagtacct
cgctcaaaccccgcctcaactttgccccgccctgtttcatcagcaccaagcgcgagcaac
atctgtatagtcctcaaatcccattggatgcactgaaggagaaagcaaattcaatgttga
cagaggccgttcagggtggcgggcaccacatccgagatcccgtaggaggatgtgtggagt
accagttcgtgccgatcttaaaactcgttagcaccttgctaaccatgggtgtgctcggca
gtgaggacgttcatcagatcttactgctcattgacccaaacgttttcagagagacacgtc
aggagggagcgacaggggccacagacaaagaaggactcacaggggcggaggacaaggcag
tggaagctggagaggaggaggcggccaaagacaccaaacagccaattaaagggctgctgg
agaagaggctgcctgagcccgtcaaacgacagatgtgtgagctgcttcactatttctgcg
attgcgagctgaagcaccgtatcgaggccatcgtgtccttctccgacagctttgtctcca
agctacagcacaaccagaagtaccggtacaatgagctgatgctggccctgaatatgtctg
ctgctgtcactgcaaagaagaccaaagagttcagatcgccacctcaagaacagatcaaca
tgctgctgaccttcagtgtgggcgaggactgtccgtgtccagcagacatccaggaggaac
tgtatgattttcacaaccagctgcagctccactgtggaatccctatggaggaagacgatg
acgagcaagacacatctatcaaagggcgcctcctaatgctggtgaacaagatcaagagcc
agtctcacaaagcagaggagcccacagagaaggagcaagccgcaccatctaacctgaagg
agctgatctctcagacgatggtcagctgggcccaggagtgtcacattctggatccagagc
tggtccgcaagatgttcagcctactgaggaggcagtatgacagcattggggagctgctcc
gggccatgaggaagacttacaccatcagtgctgcctcggtccaggacaccatcaacctcc
tggcctccctcggtcagatcagatctctgctatctgttcgtatggggaaagaggaggaga
agctcatgattgatggacttggtgacatcatgaacaacaaagtcttctatcagcacccca
acctaatgagaatactgggcatgcatgagactgttatggaggtcatggtcaatgtgcttg
gaggagacaagtcccaggaaattgccttccccaagatggtagcaagctgctgtcgcttcc
tgtgctacttctgccggatcagccgtcagaaccagaaagccatgttcgaccacctcagct
acctgctggagaacagcagtgtgggcctagcttcaccagctatgaggggctccactcctc
tagatgtggctgcttcctctgtgatggacaacaatggcctggctctggcactggaagaac
ctgatctggacaaggtggtcacctacctagcaggctgtggtctccagagttgtccaatgc
ttctggctaaaggctatccagacatcggctggaacccaattgagggggagcgttaccttt
ccttcttgcggtttgctgtcttcgtcaacggcgagagtgtggaggagaactccagcgttg
tggtcaagctgctgatccgtcgtccagagtgtttcggacctgccctgaggggagagggag
ggaacggcctgcttgcggccatgaaggaagccatcaagatctctgagacgccggctttgg
acctgccgggctcagtgcatggagtgagctctgacgtgtctgctgatggtgatgatgagg
aggaggtggtacacatgggcaacgccatcatgtccttctactctgcgctcattgacctgt
tgggacgttgtgctccagagatgcatcttatcaacaaaggcaaaggtgaagctctgcgta
ttcgcgcaatcctgcgctctctggtgcctactgaagaccttgtgggaattatcagcatac
cgctcaaaatgcccatcaccaacaaagatgggtcggtgacagagccggacatgtcggcct
gcttctgtccagatcacaaggcccctatggtgctgtttttggaccgggtgtatggtattg
aggaccagagttttctgcttcacctgctcgaagtgggcttccttcctgacctgagggctg
ctacctctctcgatacggagggtctatgtaccacagagacagccctggctatgaaccgct
acatcggctccgctttgcttcccctcctcacccgctgcgcccctctctttgctggcaccg
agcactacgccaccctcatcgactccactctgcacaccatctaccgcctctccaagggcc
gttcgctcaccaaggcccagagagatgctatagaggagtgcctgctggctgtctgcaagc
accttcgcccctccatgctgcagcagctcttgcaccgcctcgtctttgatgtgcccttgc
tgactgattactgcaagatgcctctcaggctgctaaccaaccactatgagcagaactgga
agtattactgcctcccttcgggctggggtagctacggcacagcatcggaggatgaactac
tgctcaccaagaaaatcttctggggagtatttgattctctgtcccagaggaaatatgacc
cagaactattcaagatggccatgccttgcctcagtgccatagctggagctttgccaccgg
actacgtggacgcctccattagtaccactgtcgaaaagccagtttctgtagatgctcagg
gcaactttgaccccagaccggtcaatactgctaacatttctcttccagagaagcttgagc
actttgccaacaaatacgcagagcattcccatgagaaatggtcagcggagaaggtgctgc
tgggttggaaatatggagactgtgtggatgagaaggccaagactcaccctcagctgagga
cctacaaagccctgacagagaaggagaaagagatttacagatggccaattagagagtccc
tgaagagtatgctggcaatgggctggagcattgacaggaccaaggatggagaaagcatgt
ctcaacagagagagagtgagaaaatgcgaaagatctctcaggcttctcaggcaaacggct
tcaatccgagcccgactgacacaagcaacgtggttctatccagagaattgcaggggatgg
tggagttggtggctgaaaattaccataacatctgggccaagaagaaaaagagtgaccttg
gaagcagaggagggggaacacaccctctgttggtgccttatgagacgctgacagccaagg
agaaggcccgtgatcgagagaaggcccaggacctgttccgcttcctgcagatcaatggct
acagcatcacaagaggtttgaaggacttagagcatgattcctcttccatggagaagaggt
ttgcttacaagttcctaaagaagctgctcaagtatgtcgactcagctcaggagttcatcg
ctcacctggaggccatggctgccagcggcaaaacagacaggtcccctcatgaacaggaaa
tcaagttttttgccaaagttctccttcctctcatcgaccagtacttcaagaaccactctc
tctacttcctgtcctcccctaacaagaacctgagcagcagcggttacgcctccaacaagg
agaaggagatggtcactagcctgttttgtaaactggcagctcttgtcagacataggattt
ctctctttgggagtgactccactaccattgtcagctgtcttcacattctggctcacacgc
tggacaccaggacggtgatgaagtcgggctcagagctggtgagggtggggctgaggacgt
tctttgagaatgccgcagaggacctggagaagacgttcgagaatctgaagctggggaagt
tcactcactctcgctcacagatgaaaggggtgtcgcagaatatcaactacaccactgtag
ctctgctccccattttaaccgctctgtttgaacacatcactcagcaccactttggagtcg
acctgcttttggatgatgtccaagtgtcctgctatcgaatcctgacgagtctctacgcgc
tgggtactggaaaaaaatctatacagctaccagctctcggccactgtctcgccaccctgg
ccggagccatgcctgtggccttcctggagccgctactcaatacgtacaacccctgctctg
tctttaataccaagagtgccagagaacgagcca
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integrated database retrieval system
