Micropterus salmoides (largemouth bass): 119898687
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Entry
119898687 CDS
T07309
Name
(RefSeq) RNA exonuclease 5-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119898687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msam03009
]
119898687
Ribosome biogenesis [BR:
msam03009
]
Eukaryotic type
Pre-60S particles
RNases
119898687
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
119898687
NCBI-ProteinID:
XP_038568804
LinkDB
All DBs
Position
Unknown
AA seq
812 aa
AA seq
DB search
MEPSSSSSSSSAAAAATCNGQKRKSIAPTAHEKAKRLKIVQEGEETLECGRSFRSPRISV
LLDHIQQPITLNELTELLHYAALGKTGGIKQPSWCRLRHQKRIKAVNVVIVEGLTQSHFY
KHYLTLQHLRTSYTTRVTFIPPSTDLASGIFSSEVPESDDPSLSQRHNESSKLHNALRCH
PVITKFGTQRRGLTAYVLTQEEMIKRHYPVKGMPGFEDYVCIDSVDYVTDNSPLYGLDCE
MCLTEKGYELARVSLVDSDGNCVMDDLVKPQDRILNYLTRFSGITAEMLRPITTNLQDIQ
RKLRALLPSDAVLVGHSLNNDLMALKLVHRHVIDTSLLYRREFGQRFKLKVLAETVLKRQ
IQTEEKKGHDPIEDAVAALELAQYFIKTGPLQVVELHLEELWGYTVVEESTDCAPAPTPS
HRFVDRLQTLGRSIAFLGKRSDIALDLSKQLWHNSDKELLASFRRQTKCPFLSVLQFSSL
SDYLKRYFSHQEHQYQRVCAKIRDMCVVFAGPFPPGFSEREVRRLFCCCGPVRKIKMLNT
TVRVHAEVEFELLEGAMLALKTLNGLNMQGQSIKVQRPVNESVLDLDLTLNALMGDNLNT
SHLYTVKLSPSMAECIQISAKFNGHTLDPTYSGITPVTTVNGFPPVKVNGKKLQPTTTKS
KLSEETVRETFGHFGTVERVVLLAKPGKHARHAYIKFENSEGKQAALCSSEDLRKENYLI
CPSLTPPHLPSWVAGTMPITTVEAEDDEEGTHMHSSSQDQQVDVMMRKLDRRLRKLFRSL
PDSTLSVVVLLGNTSPHGQLPGLCLMEVKQGS
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggagccttcatcctcgtcgtcatcatcatcagcagcagcagcagcaacatgcaacgga
cagaaaagaaagagtattgcccccacagcacatgagaaggccaagagattaaaaattgtg
caggaaggtgaggagacgctggaatgtggacgttccttccgctcgccgcggatctctgtg
ctgcttgaccacattcaacaaccaattacactgaatgagctgacggagctgctacattac
gccgctctggggaaaacaggtggcattaaacagcccagttggtgtcgtctccgtcatcag
aagaggattaaagctgtgaatgtggtgatcgtggaaggcctgacccagagtcacttttac
aaacactacctcacgctgcaacacctcaggaccagctacaccactagggtcaccttcatt
ccaccctctaccgacctggcgtcaggaatcttcagcagtgaagtccctgaatctgatgat
ccatccctttcccagagacacaatgaaagcagtaaactgcacaatgcactgaggtgtcac
ccagtaatcaccaagtttgggacacagaggagaggactgacagcgtatgttctcacccag
gaggagatgatcaagagacactatcctgtcaaaggaatgcctggctttgaggattatgtg
tgcatagacagtgttgactatgtgactgataacagccctctgtatggacttgactgtgag
atgtgtctaacagaaaagggatatgagttggctcgtgtttctctggtggatagtgatggg
aattgtgtgatggacgatcttgtaaaacctcaggaccgaatcctcaactacctcaccagg
ttctctggtataaccgcagagatgttgcgaccaatcactaccaacctgcaggacattcaa
aggaagctcagggcgttgttgccgagcgatgcagttttggtgggccattcacttaacaac
gaccttatggctctaaaactggtccaccggcatgtaatcgacacctcactgctgtacagg
agagagtttggacagaggtttaaacttaaggtcctggccgagacagtgctgaagaggcaa
attcaaactgaagagaagaagggtcatgatcccatagaggatgccgtggcagccctggag
ctggctcagtactttattaaaacaggacctcttcaggttgtagaacttcatctggaggag
ctgtggggatatacagtagtggaggagtccaccgactgtgcacctgcaccaacaccaagt
cacaggtttgttgacagactacagacacttggacggtcaatagcctttttaggaaagcgc
tccgacattgccctggatctgtcgaaacagctgtggcacaactctgacaaagagctgttg
gcgtctttcaggagacagaccaagtgtccgttcctctcagtgctccagttttcttccctc
tcagactatctaaagaggtacttctctcatcaggagcaccagtaccagagagtgtgcgca
aaaattagagatatgtgtgtagtgtttgccgggccattccctccaggtttctctgagagg
gaagtgaggcggctgttttgttgctgtggaccggttcggaaaatcaaaatgttgaacaca
actgtcagggttcatgcggaggtagagttcgagctgctggagggagctatgctggcttta
aaaactttgaatggactaaatatgcagggacagtccatcaaggtccagaggcctgttaat
gagtcagtgctggacttggatctgactcttaatgcgttaatgggcgacaatctcaacacc
agtcacctgtacactgtaaaattaagccccagtatggctgagtgcatacagatttcagca
aagttcaatggacacacgttagatccaacatattcaggtattactcctgttacaacagtg
aacggatttcccccagttaaagtaaacggtaaaaagttgcagcccactaccacaaagtct
aaactgtctgaggagacagtcagagagacatttggtcactttggtacggtggagagagtt
gtactgcttgccaaacctggaaaacatgcaagacatgcctacataaagtttgagaattca
gagggtaaacaggcagccctctgctcctctgaggatctccggaaggaaaactacctcatc
tgtccatccttaactccaccccacttgccttcatgggttgccgggacgatgccgatcacc
acagtggaagcagaagatgatgaggaggggacccacatgcacagcagttctcaggaccag
caagtggatgtcatgatgaggaagttggaccgacgcttgcggaagctcttcagatccctc
ccagacagcaccttgtctgtggttgtgctgcttggaaacaccagtccacatggccaactc
cctgggttgtgcctaatggaagtcaagcaagggtcttga
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