KEGG   Micropterus salmoides (largemouth bass): 119898739
Entry
119898739         CDS       T07309                                 
Symbol
arpc1b
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam04144  Endocytosis
msam04530  Tight junction
msam04810  Regulation of actin cytoskeleton
msam05100  Bacterial invasion of epithelial cells
msam05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:msam00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    119898739 (arpc1b)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    119898739 (arpc1b)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    119898739 (arpc1b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    119898739 (arpc1b)
   05100 Bacterial invasion of epithelial cells
    119898739 (arpc1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:msam04131]
    119898739 (arpc1b)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:msam04812]
    119898739 (arpc1b)
Membrane trafficking [BR:msam04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    119898739 (arpc1b)
Cytoskeleton proteins [BR:msam04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     119898739 (arpc1b)
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WD40_WDHD1_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_EML Beta-prop_IFT140_1st EIF3I Beta-prop_WDR75_1st Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st eIF2A Beta-prop_TEP1_2nd RMC1_N Beta-prop_WDR90_POC16_2nd PEP5_VPS11_N WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd Beta-prop_SPT8 SH3_3
Other DBs
NCBI-GeneID: 119898739
NCBI-ProteinID: XP_038568870
LinkDB
Position
Unknown
AA seq 380 aa
MAYHSFLLEPISCHAWNKDRTQIAMCPNNHEVHIFKKDGAKWTKIHELKEHNGQVTGIDW
APDSNRIVTCGADRNAYVWTLKEGTWKPTLVILRINRAARCVKWSPRENKFAVGSGSRLI
SICYFEQENDWWVCKHIKKPIRSTILSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVEEKP
GPTPWGSKMPFGEMLFESGGSGATSQAAVGGGGWVHGVCFSHSGNRLAWTSHDSTVSVAE
GGKTSTVNSLSSETLPLLCVTFITENSLVAAGHDCYPVLFVYDGAKGSLTFGGKLDVPKQ
AAQKGISARERFQNLDRRASETQSTEKDLNTLHKNSISQISVLEGGRNQCTKFCTTGMDG
GMGIWDVKTLESAMKDLKIV
NT seq 1143 nt   +upstreamnt  +downstreamnt
atggcgtaccatagcttcctgctggaaccaattagctgccatgcctggaataaagatcgg
acccagatcgccatgtgccccaacaaccacgaggtccacatcttcaagaaagatggggcc
aagtggaccaagatccatgagctgaaggagcacaatgggcaggtgacaggtattgactgg
gctccagacagtaatcgtatagttacttgcggagcggaccgtaacgcctatgtgtggacc
ctgaaagagggcacgtggaagcccaccctggtcatcctcaggatcaaccgtgctgctcgc
tgtgtgaagtggtcgccacgagagaacaagtttgctgtaggcagcggctcacgcctcatc
tccatctgctactttgagcaggaaaacgactggtgggtgtgtaagcacatcaagaagccg
atccgctccaccatcctcagtctggactggcatcccaacaatgttctgctggctgctgga
tcctgtgacttcaaatgcagggtgttttcagcctacattaaggaggtggaggagaagccc
ggccccactccctggggcagcaagatgccattcggggagatgttgtttgagtcaggtggt
tctggagctacaagtcaagctgcagttggaggcggtggttgggtgcatggcgtttgcttc
tcacactccggcaaccgccttgcctggacctcccatgactccactgtgtctgtcgcagag
ggaggcaagactagcacggtgaacagtctgagctctgagacacttcctctgctgtgtgtc
accttcatcactgagaacagcttggtagcagctggccatgactgttacccggtgctgttt
gtgtacgacggtgccaaaggcagcttgacatttggtggaaagctggacgttcctaagcag
gcggcccagaagggtatcagtgccagggaacgtttccagaacctggaccgccgggcctca
gagacccagagcaccgagaaggacctgaacaccctgcacaagaacagtatcagccaaatc
tcagtgctggaaggaggacgaaaccagtgcaccaagttctgcaccactggcatggatgga
ggaatgggcatctgggatgtcaagactctggagtccgcaatgaaggacctgaagatagtc
tga

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