Micropterus salmoides (largemouth bass): 119898797
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Entry
119898797 CDS
T07309
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04010
MAPK signaling pathway
msam04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119898797
04020 Calcium signaling pathway
119898797
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msam04040
]
119898797
Ion channels [BR:
msam04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
119898797
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
TMEM208_SND2
DUF3713
ETRAMP
Motif
Other DBs
NCBI-GeneID:
119898797
NCBI-ProteinID:
XP_038568960
LinkDB
All DBs
Position
Unknown
AA seq
2010 aa
AA seq
DB search
MADEDDERPFICSLPVDNGIMSCSDVPARRQGGRACCLDKDDALYRQSLGLSPEPVANGS
VSVAGLCVNWNQYYTRCHTGHTNPHKGAINFDNIAYAWIVIFQVITLEGWVEIMYYVMDA
HSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQREHQLMQEQRARCSSSSTLASEP
GDCYEELFQLVCHILRKARRQTVALFNTLRGKPRGFRGAGRGRGAGEGRHRNANGRGGHE
RRAVRRHGATCPHHNKTDHGSPAEPTALNATEGCPQCAAALLLTDGVGPVRSAVNDEAEE
GAVEETDREGVHSGSNEKGKKGQEGAGSHGGCSPKKRCNELWRETRRKLWGIVESKYFNR
GIMIAILINTISMGIEHHEQPEELTNVLEICNIVFTSMFSLEMILKITAFGSFSYLRNPY
NVFDGVIVIISVCEIVGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVAT
FCMLLMLFIFIFSILGMHIFGCKFSLRTETGDTVPDRKNFDSLLWAIVTVFQILTQEDWN
AVLYNGMAATSPLAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDATRSYSDDDRSSSN
FDESEKHDSIKLSDPRICTLTPNGHLELGAVSGPRGSYSSERRSFTIESRKSSVMSLGKS
SLERRSLSLRHGRSSNYHNWGRPPHPQSAWSRRSSSNSLGRRSYRFGGTPLVGGSLRVHG
TRSPHSYTYAAEQESLLSHPHHSHHLPPHHPPPPPLFLSRHFAARRDRRALSLELPELLR
AGGQPPGLPPFHPDPGRRSGSGAGGSITGGSGAGSGFGVDHRDCNGKAPGPHTQLMAEVF
PQVNARKDRADLDEETDYSLCFRIQKMMEVYKPDWCESREEWSVYLFSPQNKFRLLCQSI
IAHKLFDYVVLAFIFLNCITVALERPKIMQGSLERVFLTISNYIFTAIFVTEMTVKVVSM
GLYLGEKAYLRSSWNILDGFLVFVSLIDIVVSMAGGAKILGVLRVLRLLRTLRPLRVISR
APGLKLVVETLITSLKPIGNIVLICCAFFIIFGILGVQLFKGKFYYCVGFDVKNITNKSD
CLAANYRWVHHKYNFDNLGQALMSLFVLASKDGWVNIMYHGLDAVGIDQQPVTNNNPWML
LYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEVEEARRREEKRQRRMEKKRRKAQKLP
YYASYGPARLAIHTLCTSHYLDLVITFIICINVITMSLEHYSQPQSLETTLKYCNYFFTS
TFVIEASLKLVAFGFRRFFKDRWNQLDLAIVLLSVMGITLEEIEINASLPINPTIIRIMR
VLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGELVCNA
DYPCEGMSRHATFENFGMAFLTLFQVSTGDNWNGIMKDTLRECPPDGPGSDYGCHAGLQV
ISPMYFVSFVLTAQFVLINVVVAVLMKHLDDSNKEAQEDAEMDAEIELELAQGGLCCMMG
GISAIAGATGGAATGASVGGGVSGAITAGTVGGPSGVVMAPLRDGGGGGAAHEGHTHHRC
RLFSPTQESQWLDSVSLLIKDSLEGDMIDNLSGSVFHHYCSPPVCKDCKGHPQEIRLAEV
EQASLMSEQLSDKSSSLALPDDLSLDEHSSYQLLARDSERGSSDSHGSEELPTQGDYKGL
CPFSSGSKEQVQELFEVGVHPQLKSPSLEQPIPAHCTDGDGKSCSGVGGGSSPIFHLPAD
FFHPAVAAHPGSPGNGVSPGDRGPSRLASPASWASLRSPGANSRPLSSQHLSHSDSSLAT
GSSDGSLQTTLEEGLSFSVSPPRDLDLPMPLLCPLSSHPIHPQGPATGDQGHPLLKRRST
TFTLQATRGHQRSQSSGGCGSTSPSCPRQDSMDPSDEDMGTGAGGDGCRQTLNSEHLSET
LNSLSLTSLLTPGSLAAPLVKKCNSTGSLDQTNLSVRSKDGRHFYGIDAHGYLSNPWTKG
RARGEEDNDITGFSMKSSSQPTDSSSRRNR
NT seq
6033 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgaggatgacgagcgacccttcatctgctccctgccagtcgacaacggtatc
atgtcatgttctgacgtcccagctcgccgccagggaggcagggcgtgctgcctggataaa
gacgacgccctgtaccgccagtcactgggcctgagccctgagcctgtggccaatggcagt
gtcagtgtagcagggctctgtgtcaactggaaccagtactacaccaggtgtcatacaggg
cacaccaacccccacaaaggagccataaactttgacaacattgcctatgcctggattgtc
atcttccaggtgatcactctggagggctgggtggagatcatgtactatgtgatggatgct
cattccttctacaacttcatctacttcattctactgatcattgttggttccttctttatg
atcaacctatgcctcgtggtcatcgccacccagttctcagagactaagcagagggagcac
cagctgatgcaggagcagcgagcacggtgttcgtcctcctccaccctggccagtgaacct
ggggactgctacgaggaactcttccagctggtttgccacatcctccgcaaggccaggaga
caaactgttgcccttttcaacacattgcgggggaaaccccgcggctttcggggcgccgga
agaggtagaggagcaggagaaggaaggcacaggaatgccaatggaaggggaggacatgag
aggagagcagtgaggaggcacggtgcaacctgtccccaccataataaaactgatcatggc
tcacccgctgaacctacggcactcaacgccactgaaggctgcccacagtgtgccgcagcc
ctgttgctcactgatggggtgggaccagttcgcagtgcagtaaatgatgaagcagaggag
ggagcggtggaggaaacggacagggagggggtacattctggtagtaacgagaagggcaaa
aaaggccaggagggtgcagggagccatggcggctgtagtcctaagaagcgatgtaatgag
ctgtggcgcgagacgaggaggaagctgtggggaatcgtggagagcaaatacttcaaccga
ggcatcatgatcgccatcttgatcaacaccatcagcatgggcattgagcaccacgagcag
ccagaggagctcactaatgttctggagatctgcaacattgtcttcaccagcatgttttcc
ttggagatgatcctcaaaatcactgcatttggctccttcagctacctgagaaacccctac
aatgtctttgatggagtcattgtcatcataagtgtatgtgagatcgtcggccagtccgac
ggaggtttatctgtacttaggaccttcagactgttgagggtgctgaagcttgtaaggttc
atgccagctttgcgaagacagctggtggtcctcatgaagaccatggacaatgtggccacc
ttctgcatgctgctcatgctcttcatcttcatcttcagtatcctggggatgcacatcttt
ggctgtaagttcagtctcaggacagagaccggcgacacagtaccagacaggaagaacttt
gactcccttctctgggccattgtcactgttttccagattctgactcaagaggactggaat
gcagttttgtataatggtatggcagccacttcaccacttgctgctctttactttgtggcc
ctcatgacctttggaaactatgtcctcttcaacctgctggtggccatcttggttgaaggc
tttcaggcagagggtgatgccactcgttcttactcagatgatgatcgctcctcttctaac
tttgacgagagcgagaaacacgactccataaagttgtctgacccaaggatctgcacgcta
acacccaatggccacctggagctgggtgctgtctcagggcccaggggatcctactcctca
gagagacggagcttcaccatcgagtccaggaagagcagtgtgatgagcctgggcaagagc
agcctggagagacgctccctctctctacgccatggtcgcagttcaaactaccacaactgg
ggtcgccctccccatccacagtctgcatggagccgcaggtccagctcaaacagcctgggc
cggagaagctacaggtttggtgggacacctctggtgggaggcagcctccgtgtgcacggc
acccgctcaccccactcctacacctatgccgcagagcaggaatcccttctttcccaccca
caccactctcatcatctacccccacaccatccacctccacccccactgttcctctccaga
cactttgctgcaaggagggatcgacgagctctttccctggagctcccagagctgcttcgg
gcaggcggacagcccccaggccttccccctttccacccggaccctgggaggaggagtggg
tctggtgcagggggatccatcactggggggtctggggctggtagtggttttggagtggac
caccgggactgtaatggcaaggcaccaggtccccacactcagctcatggctgaggttttc
cctcaagtcaacgcacgcaaagacagagcagaccttgatgaagagacagattatagtttg
tgtttccgtatccagaaaatgatggaggtgtacaagccagactggtgtgaaagcagagag
gagtggtctgtctatctcttttcgcctcaaaacaagttcagactgctctgccagtccatt
attgcccataagctctttgactatgtggtcctggccttcatctttctcaactgcatcacg
gtggctctggagaggccaaagataatgcaaggcagtctggaaagggtgtttctcacaatt
tccaactacatctttactgccatctttgttacggagatgactgttaaggtggtgtccatg
ggtctgtacctgggggagaaagcctatctaaggagcagctggaacattctagatggtttc
ctcgtgtttgtgtctctgattgacattgtggtgtcaatggcaggtggggctaagattctg
ggcgttctccgtgttctcaggctgctcaggacgctacgccccctcagggtgatcagcagg
gctccagggctgaaactggtagtggagaccctcatcacatcccttaagccaatcggcaac
atcgtcctcatctgctgtgccttcttcatcatctttggcattcttggtgttcagctcttc
aaaggaaagttctactactgtgtgggtttcgatgtgaagaacatcactaacaaatcagac
tgtctggctgccaactatcgatgggttcaccacaaatataattttgacaaccttggacag
gctctaatgtccctgtttgtactcgcctcaaaagacggctgggtcaacatcatgtaccat
ggactggatgcagtgggaatagaccagcagccggttaccaacaacaacccatggatgctg
ctctacttcatctccttcctcctgattgtcagcttcttcgtcctcaacatgttcgtgggt
gtagtggtggaaaacttccacaagtgtcgccagcaccaggaggtggaggaggccaggcga
cgagaggagaaacgccagcgtcgcatggagaagaagaggagaaaggcccagaagctgccc
tactacgcatcctatggtccggcccggttggctatccacactctttgtaccagccactac
ctggacctggtcatcacctttatcatctgtatcaatgtcatcaccatgtctctggagcac
tacagccagccacagtcactggagactacactcaagtactgcaactacttcttcacctcc
acctttgtgatcgaggcctctctaaagctggtggcctttggctttcgacgtttcttcaag
gacaggtggaaccagttggacctggccattgtgctgctgtcagtgatgggcatcaccctg
gaagagattgagatcaatgcctccctccccatcaaccccaccatcatcagaatcatgagg
gtactcaggatagcaagagtgttgaagttgttgaaaatggcaaccgggatgagagctctg
ctagacacagtggtccaggctctgcctcaggtgggaaatcttggtctgctcttcatgtta
ctgtttttcatctacgcagctctgggagtggagctgtttggagagctggtgtgtaacgct
gactacccttgtgaaggaatgagccgacacgccacctttgaaaactttggaatggccttc
ctcacactcttccaggtttccactggtgacaactggaatggcatcatgaaggacacactg
agggagtgcccgccagacggtccgggcagcgactacggctgccatgctggactacaggtc
atctccccgatgtatttcgtgtccttcgtgctcacagctcagttcgttctgataaacgtg
gtggtggccgtgctcatgaagcatctggacgattccaacaaggaggcgcaggaggacgcc
gagatggacgccgagattgagctggagctagctcagggaggcctatgctgcatgatgggg
ggcatcagtgccatcgctggtgccacgggtggtgctgcaaccggggccagcgtgggcgga
ggagtgtctggtgcaattacagcggggacagttgggggtccaagtggcgtggtgatggcg
ccgctacgagatggaggaggaggcggtgcagctcatgagggacacacacaccatcgatgt
cggctcttctctcctactcaggagagccagtggctggacagtgtgtctctgctgattaag
gactccttggaaggggacatgattgacaacctctccgggtcggtttttcaccactattgc
tctcctcctgtgtgcaaggattgtaagggccacccacaagagatccgattggcagaggtg
gagcaggcatctctgatgtcagagcagctgtcagacaagtcatcgtctctggcactgcct
gatgacctcagcctggatgaacacagcagctaccagctgctggcaagagacagtgagagg
ggcagcagtgactcccatgggtcggaagagttgcccacccagggggactacaaaggactt
tgtcccttcagctcaggaagcaaggagcaggtccaggagttgtttgaggtgggcgtccat
ccccagttgaaatctccctcactggagcagccaatcccggcacattgcacagatggagat
ggaaaaagttgcagtggagttggtggtggatcttcacctatcttccacctaccagcagac
ttcttccatcctgctgttgctgctcatccaggcagtcctgggaacggtgttagcccagga
gacagagggccatccaggttggcctccccagcctcctgggcctccctccgctcacccgga
gccaacagcaggcccctgagctctcagcacctgtcccacagtgactcctccctggccaca
ggcagttcagatggcagcctgcagaccactctagaggaagggctcagcttcagcgtctcc
ccacctcgagatctggatctcccaatgcctctcctctgtcccctttccagccaccccata
cacccccagggaccggccacaggagaccagggccaccctttactaaagagacgcagtact
acctttactctccaagccaccagggggcaccagaggagccagagcagcggtggttgtggc
agcaccagccccagctgcccccggcaggactctatggacccttcagatgaggacatgggc
acgggggcgggtggggatggctgccgccagaccctcaacagtgaacacttgtcagaaaca
ctgaacagcctctcactgacgtcgctgctgacccctgggtctctggcagccccgctggtt
aagaaatgtaacagcacagggtcactagaccaaaccaatctatctgtccggagtaaagac
ggacgccacttctatggcatagatgcccatggttacttgtccaacccttggacaaaggga
agggcaagaggtgaggaagacaatgatatcacaggcttcagcatgaaaagcagcagccag
cccacagactcaagttccaggagaaatagatga
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