Micropterus salmoides (largemouth bass): 119898830
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Entry
119898830 CDS
T07309
Name
(RefSeq) LIM and calponin homology domains-containing protein 1-like isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
msam04990
]
119898830
Domain-containing proteins not elsewhere classified [BR:
msam04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
119898830
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
119898830
NCBI-ProteinID:
XP_038569023
LinkDB
All DBs
Position
Unknown
AA seq
1749 aa
AA seq
DB search
MASPAAGRDVPNAPPRDEPERFEPSRPEPACQEAQKWIEAVTGKSFGDKDFRRALENGIL
LCELLSAIKPGLVKKINRLPTPIAGLDNLSVFLRGCEELGLKGSQLFDPGDLQDTSIRAN
LKDSDCNRKLKNVLNTVFWLGKAASGCASYSGPTLNLKEFEGLLAQMKMESEEGGDSPHK
RSVRDSGYDCWDSERSESLSPPRHTRDNSLDSLDSFGSRSQHSPSPDVVNRGNSDGRGSD
SEADASSRKPDVRKDDMLARRTASSDSRSSIPFNQFLPNRTNASSYIPTPRRKPHTEEGE
QRSHPEATPEQGKRTGPHHKTPKTVTWAAEKNGEKLKQEEDKVTQEVLDQRKLQKLEKAG
IKVLPAAVRYSSPPTMEAQKVRSPSPNIILRCENDFLSSQKSAWDSSSDVEDEAEVRKVP
DVHRDDLASRRAHRGPVAPKVHQFVPPPVCSNKDRERWEGIRRASQQTLQEKKISENEVV
PDIITRRDNPFLNSNPRQEEDEDEEEEGRFKAMPNKQKDDLAQRRAQSRPLPHRDGPMSF
VSASMSQADLQKWERLKMTEPSEASPASVCQACLEKNYGSPFSRSAKAGRDHSKVVTFGG
VTEIEQPIDTVTSTEGEETELLRRLLSKTTVAMPTIGLGSQLSERESSQVDGADLNPTTP
PSADLSPWTTETPPTPAELDARLAQYERRTEEEDEEEEDRIPDLQKDDMMARRTGIFHKQ
STAPVIYNRFLPLPNAKRSTQGEVTTDAAPQNKGEVQADRSKKLNARSFSHRVEQQQLQV
PMETPQPRPDSTVSRAMTHSEREYDDDEDEYDENEPLPDLEKDDMMARRTGSFQKPSAAR
TNQPINQFLPVPGSVKYNIAPVSAMKPLHSRPKFTEKMASESSILAAEPQARSSITSTLS
KCGGLTARQEEDGKQEGAMTIPNTSVTGVTEPLSSPSLTPPPSPAAAQTCKVEAELEKQS
VEERVEEKVEKGKRDVNEEEPQNKPFWLDDDDLPPMMMSRRVAFMSEDTESVSLGDMLNE
EEVGYLPPLSQSRYERMQEQYNNFLEDEDHWQNDLVRWKNRRRSASQELIKKEEERKRME
KRMKEEGYDSNKRKSIKTYKEIVEEKERREAELCQAYRNAATPEEAAIVLQRYALRFTIS
DATLDSLKLPRSTSKPKQDLNQVDKEHKTASAINESETSEPLHKPEPAVTMDQSHTEPEE
IHTDTTTQQETSISLSSSSPKPGSPLAPATDSEYVPPQSLQLQEPQSKPTESLTTHQEQL
MTGDAKPQTKHTLPQIAQVQPHTTQPVHTLPSPPSVSPRAVPLLAAKPYCQPRNTQSGHK
LVKMDGLVRVNGEATEDLSVSAPLMSVRHSPQEIKDFALTQMEKDIPSERTTTNQEAAEQ
APPPQTEKCTTSSGSAISSLIGGRNCIIKTTIVTELTQTHVEPHHPDIQSNGQVNGTMGL
SGRPVEEKKAQPATSPNSLQEYSPTITEGLEESSVTIETPMLNLAKRVNHWVWDPNEERK
RLEMWQQEQERLLQEQYQREQEKLKKEWEKAQLEVQEEERKHNEEERRILEETVMPLNPT
SLLNQQPNQTGTTSPAPDNKETEGGDVAPQQNSQRISTLTEDQHASKLHFFHDSACDGEP
SKKQELLKTASLDRNPQLNQTHVVKRSESHDAVTSKHQSSPSSPQPPSPSRCVSGKRLCS
GCSQPLGKGAAMIIDTLGLFFHIQCFKCGLCKSQLGDATAGTDVRIRNGQLSCHECYIAS
RGRGQPTTL
NT seq
5250 nt
NT seq
+upstream
nt +downstream
nt
atggctagccccgcagcaggtcgagatgtcccgaatgccccgccgcgggacgagccggaa
cggttcgagccgagccgtcccgaaccagcctgtcaggaggcacagaaatggatagaggct
gtaacagggaagagctttggagacaaggacttccgccgtgcactggagaacggcatcctg
ttatgcgagctgctgagtgcaatcaagccagggctggtcaagaagatcaacaggctaccc
acccccatcgctgggctggacaacctgtcagtcttcctgcggggctgtgaggagttgggc
ctgaagggctcccagctgtttgaccccggagacttgcaagacacatccatacgagctaac
ctcaaggactctgactgcaaccgcaaactaaaaaatgtgctgaacacggtgttctggctg
ggtaaggctgccagcggctgtgcctcctacagcggccctactctcaacctcaaggagttt
gaagggcttcttgctcaaatgaagatggagagtgaggaaggaggggacagtccacacaag
cgcagcgttcgagacagtggctatgactgctgggactctgagaggagtgagtctctctct
ccaccccgacacactcgcgacaactccctagacagtctggactcctttggctcccgctca
cagcatagcccttctcccgatgtggtgaatcgaggcaacagtgacgggcgaggcagcgac
tcggaggctgatgcctccagcaggaagccagatgtgcggaaggatgacatgctggccaga
cggactgccagcagtgattcaagaagctccattccctttaaccagtttcttccaaaccga
accaatgccagttcctatatcccgactccacggcgaaaaccacatacagaggagggagag
cagcggagtcaccctgaagccactccagagcagggcaaaagaactggaccacatcacaaa
actcctaagactgtcacttgggcagctgagaagaacggggaaaaacttaaacaggaagag
gataaagtgacccaggaagtgctggatcagaggaagctgcagaagttggagaaggcaggg
attaaagttctgcctgctgccgttcgctacagcagccctcccacaatggaggcacagaaa
gtgaggtcaccatccccaaacatcattcttcgctgtgagaacgactttttgagctctcag
aaatctgcgtgggactcctcctctgatgtggaagatgaggcagaggtgcggaaagttcca
gatgttcacagagatgacctggcttctagacgagctcatcgcgggcctgttgctcccaag
gtgcatcagttcgtccctccacctgtatgtagcaacaaagacagagagcgctgggaaggc
atcagacgagcctcacagcaaacgctgcaagagaaaaagatcagcgagaacgaagtagtc
cctgacatcattacacgcagagacaaccccttcctaaactccaatcctcgccaagaggaa
gatgaggatgaggaggaagagggacggtttaaggcgatgcctaataagcagaaggatgac
ctggctcaaaggcgggctcagagtaggcccctccctcacagggacggaccaatgagcttt
gtttctgcctccatgagccaggcagatttgcagaagtgggagagactcaagatgactgaa
cccagtgaggctagcccggcttctgtgtgtcaggcttgtctggagaaaaattatggaagc
cctttcagcagatcagcaaaggctggacgagatcacagcaaagttgtgacctttgggggc
gtgactgagatcgagcagccaatagacacagtcacgtcaactgaaggggaggagacagag
ttgctaagacggctcctttccaagacaactgtagccatgcctaccattggcctgggctcc
cagctttcagagagggaaagcagccaggtagatggagctgacctcaatccaactacacct
ccctctgctgatctgtcaccctggaccactgaaacccctcccactcctgctgagctggat
gcacgtctggctcagtatgaacgcagaacagaggaagaggatgaggaggaagaggacagg
atcccagatctccagaaagacgacatgatggcgaggaggacaggaattttccataaacaa
agcactgccccagtgatttacaaccgtttcctgcctctgcccaacgccaaacgcagcaca
caaggggaggtcaccactgatgctgctccacagaacaaaggggaagtgcaggcagacagg
agcaagaaactgaacgccaggagtttctctcatagagtggagcaacagcaactacaagtt
cccatggaaacacctcaaccgcgccctgactccactgtgagccgagcaatgactcacagc
gaacgtgaatatgatgatgatgaggacgagtatgatgaaaatgagcccttgcctgacctg
gagaaggatgatatgatggctcggaggaccggatcattccaaaaaccgagtgcagccaga
acaaatcagcccatcaaccagttcctgccagtacctggatcagttaaatataacatcgcc
ccggtgtctgcaatgaagccactacacagcagacccaaattcactgagaagatggctagt
gaaagcagcatcttggcagcagaacctcaggcccggtcctccataacttcaaccctctcc
aagtgtggggggctgacggcgaggcaagaggaggatggaaagcaagagggagccatgaca
atccctaacacgtctgtcacaggtgtgactgagcccctctcctctccatcacttacccct
ccgcccagtcctgctgctgcccagacttgtaaagtggaggcagagctggaaaagcaaagt
gtggaggaaagagttgaggaaaaggtggagaagggaaagagggatgtgaatgaggaagaa
ccacaaaataaaccgttctggctggatgatgacgatctacctcccatgatgatgagccgg
cgagttgcttttatgtctgaggacactgagagtgtgagcttgggtgacatgcttaacgag
gaagaggtaggatacttaccgccactgagccaatcacgatatgagcgcatgcaagagcag
tacaacaacttcttggaagatgaggaccactggcaaaacgacttggttcgctggaagaat
cgccgtcgcagtgcgtctcaagaactgatcaagaaagaggaagagaggaagaggatggag
aaaaggatgaaggaggagggatatgacagcaacaagaggaaaagcatcaagacctacaaa
gagatcgtggaggagaaagagcgcagagaggcagagttgtgtcaagcctacaggaatgca
gcgactccagaagaggccgccatagttttacagcgttacgctcttcgctttaccatcagt
gacgcaacactggacagcctaaaactccccagatccacttcaaaacccaaacaggaccta
aatcaggtggacaaggagcacaaaactgcatcagctattaatgagtctgaaacatcagaa
cctctgcacaaaccagaaccagctgttacaatggaccagagccacacagaacctgaagag
atacacacagatacaactactcaacaagagacatcaatttctctctcctctagctcccca
aaacctggcagtcccctcgccccggcaacagactcagaatatgtgccacctcagtcacta
caactccaggaacctcagtccaaaccgacagagtctctaaccacacatcaagaacaactg
atgacaggggatgcgaagcctcaaaccaaacacactctgcctcagattgcacaagtgcag
cctcacaccacgcagcctgtacacacactcccttctcctccatctgtatcccccagagcc
gtcccccttctggcagcaaagccttactgccagcccaggaacacacagtctggacacaaa
cttgtcaagatggacgggttggtgagagtgaacggagaggcaacagaggatttatctgtt
tccgctccacttatgtctgttcggcactcaccacaggagatcaaagactttgccctcaca
cagatggagaaagatattccctccgagcggactacgaccaatcaagaggcagcggagcag
gcgccacctccacagacagaaaaatgtaccacatcttcaggctctgccatcagctccctg
attggaggcagaaactgtatcatcaagacaaccattgtgacagaactcacacagactcat
gtggagccacatcacccggatatccaaagcaatggccaggtcaatggtactatgggatta
tctgggagaccagtggaggaaaaaaaggctcagccagctacatcaccaaacagcttgcaa
gaatattctcccactatcacagagggacttgaggagagcagtgtgactattgagaccccc
atgttgaacttggctaaacgtgttaatcactgggtctgggaccccaatgaggagcgtaaa
cgcctggaaatgtggcaacaggagcaggagcgcctcctacaggagcaataccagagagaa
caggagaagctgaagaaggagtgggagaaagcacagctagaggtgcaggaggaggagaga
aaacacaatgaagaggaaagaaggattctagaggagactgtaatgcccctcaatcccacc
agcttgttaaaccagcagccgaaccagacagggacaacatcaccagctccagacaacaaa
gagacagagggaggagacgttgctccccagcaaaacagccaaagaatctccaccttgacg
gaggatcagcatgcttcgaagctgcatttcttccacgattctgcatgtgatggtgaacct
tcaaagaaacaggaactgctgaagacggcctcactggaccgcaaccctcagctgaaccag
acacatgttgttaaaagatctgaatcacatgacgcggtaacaagcaaacaccagtcctcc
ccttcatcccctcagcctccctcacccagcaggtgtgttagtgggaagagactatgttct
ggttgttctcaaccacttggaaaaggagctgccatgatcattgatacactggggctgttt
ttccacatacagtgtttcaagtgtggattgtgtaaaagccagctgggtgacgctactgca
gggactgacgtacggattcgtaatggacagctgagctgtcacgagtgctatattgcatct
cggggcagaggtcagcccacaacactatga
DBGET
integrated database retrieval system
