Micropterus salmoides (largemouth bass): 119898840
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Entry
119898840 CDS
T07309
Symbol
fam160a1a
Name
(RefSeq) LOW QUALITY PROTEIN: protein FAM160A1
KO
K26420
FHF complex subunit HOOK interacting protein 1
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119898840 (fam160a1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
msam04812
]
119898840 (fam160a1a)
Membrane trafficking [BR:
msam04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
FTS/Hook/FHIP (FHF) complex
119898840 (fam160a1a)
Cytoskeleton proteins [BR:
msam04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
FTS and Hook-interacting proteins (FHIP)
119898840 (fam160a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAI16-like
DUF5917
KELAA
Motif
Other DBs
NCBI-GeneID:
119898840
NCBI-ProteinID:
XP_038569041
LinkDB
All DBs
Position
Unknown
AA seq
988 aa
AA seq
DB search
MMASMVANGNRDGQALDLKGVDPETCMIVFKNHWAQVVKILEKHDPLRSNSTLPSLSVIN
LSAGSSGGPRFGTIPGDEASAVQNYVEHMLFLLMEEESGQAGAMGPILEFVVMENVMERL
FVWSLRREFTDDMKVEQLKMYEMLVGQAHQPLLHHKPILRPLMMLLSSCSGTAAPEVEAE
LVLLLNQLCCVLAKDPSILELFFHTSEDQGATNFLIFSLLIPFIHKEGTVGQQARDALLL
IMSLSAENERVAKHIAENTYFCPVLATGLSGLYSSLPTKLEVPSEEWHCLHREDWLQMPS
LIQFLNSLEFCNAVIQVAHPDIREQLVSYIYNGFLVPVLAPALHKLTLEEVMTTTAYLDL
FLRSVSEPALLQTFLSFILLHQHENVHILDTLVSRINTPFQLGTVSLALFRTLIGLYCED
VMLQLILRYLIPCNHMMLSQRRVVRERDCYSVSAAKILALTPSCCSPDHSPPPLRQLDSI
LFSKGAEIPSNTSATEKKKSFLEEDDDSGNSCTIGSEIYLDVSYLHYLYDARLSISSCIR
ACQVWSARYDGEXPPPEKYQPGVLEDPGLKSLQAQMALKKVPQLLALRPQPCPAPNTEPP
STNQLELEWDDSYDACPVQAAEAPVESKRPQQPPAEPPKHIQEMRKTAIMLVKGSYIEEN
EFQDDVMVYDLVAKKDARDVERGKLTSNGSESEETQPGTVDVPLINGLSLTLPTSLMATK
AKVQTDCNSNVQNNTAADLGDDLLAQYEDLIRALDTEAGGKQDKTDGELKKPVTPVVVEE
EEEDEMDFTSFSAETPETEKLHSPFGTKFPSGSAGRGHSVPFTGPFVSVLLSRMENMLSN
SLHVNLLLTGILAQLATYPQPLLRSFLLNTNLVFQPTVRSLYQVLATVKHQIEDLAATRK
DFPELITAAQHWLLARETSFMSADKSSSKHSTHGEAGRILKSSPPQKPKAISLDRTEVFA
TVLFTEFLKELAAIAQEHSILSYIPMEE
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgatggcctccatggttgccaatggaaaccgagatgggcaggctctggatttgaaaggg
gtggatccagagacctgcatgattgtgttcaagaaccactgggctcaggtggtgaagatc
ctagaaaagcatgatcccctgcgcagcaactccaccctgccctccctgagtgtcatcaac
ctcagcgctggctctagcggcggccctcgttttggcaccatccccggagatgaagcgagt
gcggtgcagaactatgtggagcacatgctgttcctgctcatggaggaggagagcggtcag
gccggagccatgggcccgatcctggagtttgtggtcatggagaacgtgatggagcgtctc
tttgtgtggagcctccgcagggagttcacagacgacatgaaggtggagcagctaaagatg
tacgagatgctggtgggccaagcgcaccagcctctgctgcatcacaagcccatcctgcgg
ccactcatgatgctgctgtcgtcctgttcaggcaccgcagcgccagaggtggaagccgag
ctggtgctgctgctcaaccagctgtgctgcgttctggcaaaggacccttcaattctggag
ctgtttttccacacaagtgaggatcagggagccaccaacttcctcattttctccctgctc
atccccttcatccacaaggagggcacggtgggccagcaagccagagatgcactgctgctc
attatgtcgttgtctgctgagaatgagcgagtggccaaacacatcgcagaaaatacctac
ttctgtccggtgctggccacagggctgagcggtctgtactcatctctgcccaccaagctg
gaggttcccagtgaggagtggcactgcctgcacagagaggactggctccagatgccgtcc
ctcatacagtttctcaactcactggagttctgcaacgctgttattcaggtggcgcaccct
gatatcagagaacagctagttagctacatctacaatggattccttgtgcctgtcctagca
ccagctctgcacaagctgactctagaagaggttatgaccaccacagcgtatctcgacctc
ttcctgaggagtgtctctgagccggccctgctgcagactttcctctccttcatcctcctc
caccaacatgagaacgtccacattttagatactctagtcagccgcatcaacacccccttc
cagttgggcaccgtgtcactggcacttttccgcactctcattggcttatactgtgaagat
gtgatgctgcagctcatattgaggtacctgatcccctgtaatcacatgatgttgagtcag
agacgtgttgtaagggagagggactgctactctgtgtcagcagctaagatcctggcatta
acgccgtcctgctgctctcctgatcacagccccccgcccctccgacagctggactccatc
ctcttttccaagggggcagagattcccagcaacaccagtgccaccgagaagaaaaagagc
ttcttagaagaggatgatgactcaggtaattcctgcaccatcggctcagaaatctacctg
gatgtcagttaccttcattacctctatgatgcccgtctgagcatcagcagctgcataagg
gcctgccaggtttggtcagcccggtacgacggtgagngaccccctcctgagaaataccag
cccggcgtcctcgaggatccagggctgaagagtctgcaagcccagatggctctcaagaaa
gttccacagctgcttgctctgcgccctcaaccctgcccggcgccgaatacagagccaccc
tccaccaaccagctggagctggagtgggatgatagttacgatgcgtgcccggtgcaggct
gctgaggctcctgtggagagtaaacgtccgcagcagcctcctgctgagcccccaaaacac
atccaggagatgaggaaaacagccatcatgttggtaaaaggctcatatattgaggaaaat
gagttccaggacgacgtcatggtatatgatcttgttgccaagaaagatgccagagatgtc
gagcgcggaaagctcacctccaacgggtctgaatcagaagaaacccaaccaggcactgtt
gatgttcctctaataaacggactcagtctaacgcttccaacctctctgatggccacaaag
gccaaagttcagacagattgtaattccaacgtccaaaacaacactgccgctgatttgggt
gacgaccttttggctcaatatgaagacctcattcgtgcattggacacagaagcaggtgga
aaacaggacaaaaccgacggagagttgaagaagcctgtcacacctgtggtggtggaggag
gaagaggaggatgagatggatttcacctccttctctgctgagacacccgagacagagaaa
ctgcattcgccgtttgggaccaagtttccctctggaagtgcagggagaggccattcagtg
ccttttacaggtccatttgtcagtgtgctcttgtctcgcatggagaacatgctgtccaac
tcgcttcatgtcaacctgttgttgacgggcatcctggcccagttggcgacctaccctcag
cctctcctgcgctcttttctcctcaacaccaacttggtcttccagccgactgttcgctct
ctttaccaggtattggctaccgtgaagcaccagatagaagacttggctgccaccagaaaa
gactttccagagctgatcactgccgcccaacactggctgctggccagggaaacttcattc
atgtcagcagacaaaagcagcagcaaacactccacccacggtgaggcgggaaggatcttg
aagagttcaccgccacaaaaacccaaagccatctctctggatcggacagaagtcttcgct
accgtcctcttcacggagttcctcaaagaactggctgctattgcacaagagcactccatc
ttatcatacattcctatggaagagtga
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