Micropterus salmoides (largemouth bass): 119898866
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Entry
119898866 CDS
T07309
Symbol
usp38
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msam01002
]
119898866 (usp38)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119898866 (usp38)
Enzymes [BR:
msam01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119898866 (usp38)
Peptidases and inhibitors [BR:
msam01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119898866 (usp38)
Ubiquitin system [BR:
msam04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119898866 (usp38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
119898866
NCBI-ProteinID:
XP_038569078
LinkDB
All DBs
Position
Unknown
AA seq
1033 aa
AA seq
DB search
MDKILEGLVSSDHSIPVKRAIVKKVVEAAEKEVTEEQCQSLFTLTTRLILLGEDAFQKQI
GFQVLDAYARYHRPEFEHFFSKDFVLSLLQQGYFHLDRKDPAIIDYIHCCLRLLISCPSV
LEIFSVIQVEVLRMVCERPEPALCARLNTLLSDFVQCIPRDKSGVLFCQQLVRTISYFHC
FASQERELREYVGQVTKVSTLLQNIWKADPATLLPSLQEVFAIISSTDPSFDPSIALASL
VQHIPVQMITVLIKSLTTDHNVKDANMTKALCRMIDWLSWPLAQHVDTWVIALLKGLAAV
QKFTILIDVTLLKIELVFSRLWYPIVRQGALAVLSHMLLSFQHSPEAFHLVVPHVVHLVQ
SLRTDGLPTSKAFLLQFTELIHCMMYQYSGFPDLYDHILEAIKDLPKPGEEKIKLVLNQS
AWTSQSNSFASGLQRQVGKSETGKTGLVNLGNTCYMNSIIQTLFMATDFRRHVLSLHLNG
SNTLMKKLQLLFAFLAHTQRAAYAPRNFLDASRPPWFNAGSQQDCSEYLRFLLDRLHEEE
KTLQVLESAKPKVASPIDTSSKDPKGQICPEEGEESSLTPAETKPGADGRTLIETMFGGK
LITGIRCMQCNCISEKEERFTDLSLAFCPSVSQPEGPSEEPKVLCQGSVNGGSETPEPSL
AKAPASNVHFVPVTNEPPLSVPDLVNYFLAPEILDEENAYYCEKCSSLQRAERTMKVVSA
PEYLILTLLRFSYDAKCHVRRKILDNVTIPPLMRLPVHVASMPAQCSSSTSSPLQVDSPE
SSENLAKKLKPSQKDEEDEERLNGAEQINRGGEMSVQSVPYVLSSVVMHSGISSESGHYY
SYGRNINGADGTQHPANHYALKEDLGNGHAECSLSTCSALSISPERGDTLPNSGQEARDW
LLFNDSRVTFSSFQSVQNITNRFPKDTAYVLMYRKQELPGQSVNGGLMANGMRLSAEPPL
QKELLDAIIKDNKLYLQEQELNARTQALQAPSSSCSFRPNGSDDNNPPGSCGPSGGGGGG
GGGGFNTISRLVF
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggacaagattttggagggcctcgtgagctccgatcactcaattccagtgaagagggcc
attgtgaagaaggtagtagaagccgcggagaaggaagtgactgaagagcagtgtcaatcg
ctgtttactcttaccacccgcctcatcttgctcggcgaagatgcctttcagaagcagatc
ggcttccaggttttggatgcctacgcacgttaccaccgcccagagtttgagcacttcttc
agtaaagactttgtcctcagtcttctccagcagggctatttccatctggaccgcaaagac
ccagccattatagactacattcactgctgcctgcggctgctcatcagctgcccatctgtg
ctggagatcttcagcgtgatccaggtggaggttttaaggatggtgtgtgaacgtccagag
ccggctctctgtgcccgcctgaacactttgctgtcagactttgtgcagtgcatcccgagg
gataagtcgggcgtcttgttctgccagcagctggtgaggaccatcagttacttccactgc
tttgccagccaagagcgggagctgagagagtatgtaggtcaggtgaccaaggttagcaca
ctactgcaaaacatctggaaggcggacccggccacactgcttccctcactacaggaagtc
tttgccattatctcttccacagacccctcatttgacccatccattgctctggccagcctg
gtgcagcacatccccgtccagatgatcacggtgcttatcaagagtctcaccacagaccac
aatgtcaaagacgcaaacatgactaaagcgctctgcaggatgattgattggctttcttgg
cctctggcccaacatgtcgatacctgggtcattgctttactgaaaggacttgctgcagtt
cagaagttcactatcctcatagacgtcactctgcttaaaattgaactggtattcagtcgt
ctgtggtaccccattgtgcggcagggggcgctagctgtgctttcccatatgctgctgagt
ttccagcactctcctgaggccttccatttggttgttccacatgtggtgcatctagtccag
tctttgaggacagatggtctccccaccagtaaagcttttttgctgcagttcactgagctc
atacactgcatgatgtaccaatactctggcttccctgacctctatgaccacatactagag
gccatcaaggatctcccaaaacctggagaagagaagatcaagttggtgttgaatcaaagt
gcctggacatcccagtccaactcatttgcctcaggtcttcagaggcaagttgggaagtct
gaaacgggcaagactggcctggtcaacctggggaacacgtgctacatgaacagcatcatt
cagaccctctttatggccacagatttcagacggcatgttttatcattacatctaaatggt
tccaacacattaatgaaaaagctccagctgctctttgctttccttgcacacactcagagg
gcagcatatgctcccagaaacttcttggacgcgtctcggccgccctggttcaatgccggc
tctcagcaggactgctctgagtacctcagattccttctagacaggttacatgaagaagag
aaaacacttcaggtcctggaatcagctaagccaaaggttgcctcccccattgatacaagc
agcaaagacccaaaaggtcagatttgtccagaggagggagaagagtcatctttgactcca
gcagaaaccaaacctggggctgacggaaggacgttgatagaaacgatgtttggtgggaag
ctgatcacaggtattcgctgtatgcagtgtaactgcatctctgagaaagaggagcgtttt
acagacctctctttggccttctgtccttctgtcagccaacctgaggggccctcagaggag
cccaaggtcctctgtcagggatcggtcaacggcggcagtgaaactcctgagccaagcttg
gccaaagccccggctagcaatgttcattttgtgccagtgacaaatgagcctcctctctct
gtgcctgacctggtgaactatttcctggctccagagatcctggacgaagagaatgcctat
tactgtgagaagtgtagctccctccagcgggcagagaggaccatgaaagtggtctcagca
cctgaatacttaatcctcaccctgctgagattctcctatgatgccaaatgccatgttcgg
aggaagattctggacaatgtcactatcccgccactcatgagacttcctgtgcatgtcgct
tcaatgcctgcacaatgttcctcttctacctcttcccctctgcaagtggattctcctgag
agcagtgagaatttggccaagaagctcaaaccgtctcagaaagacgaggaggacgaggag
aggctaaatggagcagagcagatcaacagaggaggagagatgtcagtacagtcggtgccc
tatgtcctcagctcagtggtgatgcattctggtatatcgtctgagagtggccactactat
tcctatggtcgtaacattaatggagcagatggaacacagcatccagccaatcactatgcc
ctcaaggaggatttggggaatggccatgctgagtgtagcctctccacctgctcagctctc
tcaatttcacctgaacgaggagacacactacctaatagtggccaggaggcaagggattgg
ctgctgttcaacgacagcagagtgacattctcgtccttccaatcagtgcaaaacattact
aatcgattccccaaggacactgcatatgtgctcatgtacaggaaacaggagctaccaggg
cagagtgtaaatgggggactaatggcaaatggaatgagactgagtgctgagcctcctctg
cagaaagaactactggatgctattatcaaggacaacaagctgtatttacaggaacaggag
ctcaatgctcggacccaggctctccaggccccttcatcctcctgctcattcaggcctaac
ggttcagatgacaataacccaccagggagctgcggcccatctggcggaggaggaggagga
gggggaggaggcttcaataccattagtagactggtcttctga
DBGET
integrated database retrieval system
