Micropterus salmoides (largemouth bass): 119898883
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Entry
119898883 CDS
T07309
Symbol
herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119898883 (herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119898883 (herc3)
Enzymes [BR:
msam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119898883 (herc3)
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
HECT type E3
119898883 (herc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Beta-prop_TEP1_2nd
EKLF_TAD1
Motif
Other DBs
NCBI-GeneID:
119898883
NCBI-ProteinID:
XP_038569103
LinkDB
All DBs
Position
Unknown
AA seq
1049 aa
AA seq
DB search
MLCWGNAKDGQLGIGVEGNSMFEPRNCPVFSGRGLKELACGGQHTMFLLHDGSVYTCGSN
SYGQLGHDKPGTSPEPVGALDTQTITMVSCGRAHSLAVNEHGQVFSWGAGEGGQLGLGTA
EAAVRIPRLVKRLCDHRISQVMCGNQHCIALSRDGQLFTWGQNTSGQLGLGKGEPSKLFP
HPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDKQDRAVPCHIKFLRS
QKVVHISCGEEHTAALTKDGGLFTFGDGSWGQLGHGSTNDELLPRRVLELMGTEVSQITC
GRRHTLAFVPSSGVVYAFGCNSHGQLGTGMLGDARSPFPVKAGFLTGNIHGTGSKQYTVT
KIICGGDHSFLLYSNEQSFVPPEDFRVINVSKSLSPINYERLNSWRLKLMYSPDSSVTND
IVIHLSSTACWNASFLDQSDDTHFKTNPKIPGIDLNAVRVLFETLSKPAFSGLLEQASKS
FESLLIPQLPRSPPDVEAMRIYLILSEYPALLDSKNYIRLTIPLAMAILRLDANPSKVLD
NWWCIVDGSVFTRMVDMYKSIVVFMLTGGKTLLVPVFYENYFVATLRLLEKLHKVNLKAG
HVEYHRFYIPDITSLVDIQEDYLKWFLSKAEIKVGSSSPAQSDFPSVNLCAYPFILNAQA
KTTMLQTDAELQMQMAVSGANLHNVFMLLTLEPHLARNPYLVLHVRRNHLVSDTLRELTM
YSDVDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLDPVYGMFTHYNESNLLWFSDKC
FVEQNWFHLIGIICGLAIYNSTVVDLHFPLVLYKKLLDVSPTLEDFKELSPTEARSLQQL
LDYEGGDVEETFLLNFAITRENYGITEVKELIPGGESVSVDKNNRKEFVEAYLRYVFSDS
VSEQYSAFSSGFLKVCGGEILSLFQPSELMAMVVGNNDYNWEEMEKNAVYKGEYTSTHPT
VRLFWEVFHEFPLEKKKQFLLFLTGSDRIPIHGMESLRIVIQSTTAEEHYLPVAHTCYNL
LDMPRYQTKEILRRRLTQAVEQYEGFSLV
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgttgggggaatgcaaaggatggacagttggggattggtgtggaggggaactcc
atgtttgagccaaggaactgtcccgtgttcagtggcaggggactgaaagagttggcctgt
ggagggcaacacacaatgttcctgctgcatgatggtagtgtgtacacatgtggttctaac
agctatgggcagctgggccacgacaaaccaggtacttcaccagagccagtgggagctctg
gatactcagacgatcacaatggtgtcgtgtggtcgggcccattctctggcggttaatgag
cacggtcaagtgttttcctggggagctggtgaagggggccagctcggcctggggactgca
gaggcggctgttcgaatcccaaggttggtcaaaaggctgtgtgaccaccggatctctcaa
gtaatgtgtgggaatcagcactgcattgcactatctagagatggccagctgttcacgtgg
ggccagaacaccagcggtcagctcggtctggggaaaggagagcctagcaagctgttccct
catcccctgaagtctctggcgggaattcctttggcacagataaccgccgggggagaccac
agcttcgctctctccttgtccggagctgtatttggttggggcaagaacaaagctggacag
ctgggtctcaatgataaacaagaccgtgctgtcccatgccacatcaaatttttgagatcg
cagaaggttgttcacatcagttgtggagaagaacatacagcagccctcaccaaggatggc
ggcttgtttacatttggtgatggctcgtggggtcagctgggccatggctccaccaatgac
gaacttttacccagacgagtgctggagctcatgggcactgaggtgtcccagatcacctgt
ggcaggcgtcacacgttggcgtttgtgccttcctctggtgtggtatatgcgtttggttgt
aatagccatggccagctgggcacaggaatgttgggagatgccagaagcccatttcctgtc
aaggctggtttcctgactggaaatatccacggaacagggtcaaaacaatatacagtgacc
aaaatcatctgtggaggagaccatagtttcttattgtattcaaatgaacagagttttgtc
cccccagaagacttcagagtgattaatgtcagtaaatcactctccccaatcaactatgaa
agattaaattcatggaggttaaagctgatgtacagcccagattctagtgtcacaaatgac
attgtaattcatctctcctccacggcttgttggaacgccagcttcttggaccaaagtgat
gatacccacttcaaaaccaacccaaagatcccaggcatcgacctcaacgctgtcagagtg
ctgtttgagacgctcagcaaaccggccttctctggactgctggagcaggccagcaagagt
tttgagagtctgttgatccctcagctgccacgctcccctcctgacgtcgaggccatgagg
atctacctcatcttgtctgagtacccggcactgctggactccaagaactacatccgcctc
actattcccctggcaatggccatcctccggctagacgccaaccccagcaaagtactggat
aactggtggtgtattgtagacggcagtgtgttcaccagaatggtcgacatgtacaagagc
atcgttgtgtttatgctaacgggaggcaagacgctgctcgtaccagtgttctatgagaat
tattttgttgccacgctgaggctgctggagaaactccacaaggtaaacttaaaggcgggc
catgtggagtaccaccgcttttatatccctgacatcaccagcctggtggacatccaggaa
gactacctcaaatggtttctgagtaaagctgagattaaagtgggatcatcctcccctgcg
cagagtgactttccctcagtgaacctatgtgcctacccattcatactgaacgctcaagcc
aagaccactatgctgcaaacagatgctgaactgcaaatgcagatggcagtcagtggtgca
aacctgcacaatgtctttatgctgctcacactggaaccccaccttgctaggaacccttac
ttggtgctccatgtgcgcaggaaccatttagtaagtgacacactacgtgagctcaccatg
tactctgatgtggacctcaagaaaccgctcaaggtgatctttgatggagaggaggccgta
gatgcaggtggagtaactaaagagttcttcctgctgctgttaaaggagctattggatcct
gtatatgggatgttcactcattacaatgagtccaacctgctgtggttctcagacaaatgt
ttcgttgagcagaactggtttcacctgattgggatcatctgcggtctggccatctacaac
tccacagtggtggacctccacttccctctggttctctacaagaagctgcttgatgtctca
ccgacactggaggacttcaaggagctctcacccacagaggccaggagtctacaacaactt
ctagactatgaaggaggcgatgtggaggagacgtttctcctcaactttgctatcacgagg
gagaactatgggataacagaagtcaaggagctcattcctggtggagagagcgtcagtgtg
gacaaaaacaacaggaaggagtttgtggaggcctacctgcgctacgtgttctcagactcg
gtgagcgagcagtactcggccttctcctccggcttcctgaaggtgtgcgggggggagatc
ctgtcgctgttccagccctctgagctgatggccatggtggtcggcaacaacgactacaac
tgggaggagatggagaagaatgctgtttacaagggagaatatacatctactcatccaaca
gtcagattgttttgggaggttttccacgagtttcctctagaaaagaagaagcagttctta
ttgttcctgaccgggagcgaccgtatccccatccacggcatggaaagcctgcgcatcgtc
atccagtccaccacagcggaggagcactacctgccggtggctcacacctgctacaacctg
ctcgacatgccccgctaccagaccaaagagatcctgcgccgccgtctcactcaggctgtg
gagcagtacgagggcttcagcctggtctga
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integrated database retrieval system
