KEGG   Micropterus salmoides (largemouth bass): 119898899
Entry
119898899         CDS       T07309                                 
Symbol
sem1
Name
(RefSeq) 26S proteasome complex subunit SEM1
  KO
K10881  26 proteasome complex subunit DSS1
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam03050  Proteasome
msam03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:msam00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    119898899 (sem1)
  09124 Replication and repair
   03440 Homologous recombination
    119898899 (sem1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msam03019]
    119898899 (sem1)
   04131 Membrane trafficking [BR:msam04131]
    119898899 (sem1)
   03051 Proteasome [BR:msam03051]
    119898899 (sem1)
   03400 DNA repair and recombination proteins [BR:msam03400]
    119898899 (sem1)
Messenger RNA biogenesis [BR:msam03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     119898899 (sem1)
Membrane trafficking [BR:msam04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    119898899 (sem1)
Proteasome [BR:msam03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     119898899 (sem1)
DNA repair and recombination proteins [BR:msam03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     119898899 (sem1)
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 119898899
NCBI-ProteinID: XP_038569145
LinkDB
Position
Unknown
AA seq 70 aa
MSDKKQTVDLGLLEEDDEFEEFPAEDWTGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAEL
EKHGYKMETS
NT seq 213 nt   +upstreamnt  +downstreamnt
atgtcagacaagaaacagaccgtggacctgggcttactggaggaagatgacgagtttgaa
gaattcccagccgaagattggacggggctggatgaagatgaagatgctcatgtttgggaa
gacaactgggatgatgacaatgtagaggatgatttctcaaatcaactgagggctgagctg
gaaaaacatggttacaagatggagacgtcatag

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