Micropterus salmoides (largemouth bass): 119899086
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Entry
119899086 CDS
T07309
Symbol
tbc1d1
Name
(RefSeq) TBC1 domain family member 1 isoform X1
KO
K18341
TBC1 domain family member 1
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119899086 (tbc1d1)
Membrane trafficking [BR:
msam04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
119899086 (tbc1d1)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
119899086 (tbc1d1)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
119899086 (tbc1d1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
DUF6979
DUF2594
Pept_S41_N
Motif
Other DBs
NCBI-GeneID:
119899086
NCBI-ProteinID:
XP_038569423
LinkDB
All DBs
Position
Unknown
AA seq
1407 aa
AA seq
DB search
MEGLYFEVKPRRDEPPRPGRSEKPCPIVTSNHHSCPSFSHLTSSTPCPQKLTSARRRIAT
WGGKVEEAREEEEKEEEVQYKLTLIGSLPVHHLTTMAMLPWVVAEISKSQPAEKELGAGL
RSGSPGGGQVDPLTCSQTVFLCVSASWVQCASVVGEGVVWDPLTHTVLFECRPHQVTKLI
HNSQEPNSFGCLVRDAPNCACYVFQCQDSTKVPEIISTLRQAGKSSARNDDITTISNKTS
SGGSDPSEKCFSSLSTTAPSAAVSPTAFAKKFEVLFCGRVSVADKKAPPALIDECIEKFS
QSHGSGTCDKGRNSGGLVGGLRRALTLPPNGLGSDGIGNGAAGSPTTGKRPVLFKRDPSF
PCLQALDENGLSPEISHTSTTDAHAHSAGVQPTSLKENRTMLFTVGRSQVFLVSPDTKKV
AIEKSFREISFCSQGIRHVDHFGFICRETVEGGSCHFVCYVFQCTDESLVDEIMLTLKQA
FSVAALLQNAKTQSQQCDSCPMQQFHKLCERIEGLYPSKTKLELQKHLATLDNQEQASVF
ENTMRARPKSDQEENELVMASLRNLYEEKQRSHQHTLPGDSKQVCEEGAPAPVEAQQQSS
SRQRLEQFKSRAKRSLTESLEGIWKGSSKARAQRDNSVGSDSGSSICTVNSSQDQPCLDD
PLPASSQLRPTSPLRCHNSTGDLKHMDSSLPLSMSSSSLPDDAQPQGFRKRASTFSHPPS
LSSAEDSSVHILIHTQQDPTAATKPKLVRHYSVSTDSPHQSKQSQNDSTLPPVPPCPLSL
SPLLPHHPSSPSTGARLNKRSPLSGLRARLHSSSSVPNFLKFQFLAPVQENDCPERKSSD
VAALSTSAACGVGESPLRSHRHSWRQQIFLRVATPQKNTETNERGDPCLEGGRVCVGQVG
IGGSGDLSISVVPEERTKRSKEELRELWRKAILQQILLQRMEMENQKLQASESDLQNKRL
KLDYEEITPCLKEVTLVWEKMLGTPGRAKVKFDKETIHAAVAQGVPRQHRGEIWKFLSEQ
YLLRQTVPSRPPTNHTPYKDLLKQLTSQQHAILIDLGRTFPTHPYFQAQLGAGQLSLYNL
LKAYSLLDPEVGYCQGLSFIAGVLLLHMGEEDAFNMLKFLMYDVGLRKQYRPDMIILQIQ
MYQLSRLLHDYHRDLYSHLEQQEIGPSLYATPWFLTAFASHFPLGFVARVFDMLFLQGSE
VIFKVALSLLGSHKPLILQHEHLESIVDFIKTTLPNLGLVQMEKTINQVCEMDVSKQLQA
YEVEYHVLQDELLDTPPSLNQHQRTAQLERTNQSLRQQNLDLLEELQVSHARVCSLESRV
EAFAQSEGRLRQQVSALEEEKKQLVSTVTRLQDLLTRLGIHTTLDGHILPQPLKDIQQMW
KTERDRRTGLWTPFPTLWIFQRVHNCT
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atggagggtctctactttgaagtgaagcccaggagagatgaaccccctaggccagggaga
tctgagaaaccatgtcctattgtaacctcaaaccaccactcgtgtccatcattttcacat
ctcacgtcttccacaccctgtcctcagaaactcacctctgctaggaggaggattgcaaca
tgggggggaaaggtagaggaagcacgagaggaggaggagaaggaggaggaggtacaatac
aaactgacattgatcggttctctgccggtccaccacctgaccaccatggccatgctgccc
tgggtggtggctgagatcagcaagtctcagcctgcagagaaggaactgggtgctgggttg
cggtctggaagtcccggaggtggacaggtggaccccttaacctgcagtcagacagttttt
ctgtgtgtgtcagcatcatgggtgcaatgtgcatccgttgtgggagagggagttgtctgg
gaccctctgacacacacagtactgtttgaatgtcgtcctcaccaggtgactaagctaatt
cacaacagccaggagcccaacagcttcggctgcctggtcagagatgcaccaaactgtgcc
tgctatgtcttccagtgccaggatagcaccaaggttcctgagataatcagtacattgagg
caggctggcaagagctcggcacgcaacgatgacatcaccaccatttccaacaaaacttcc
tcaggaggcagcgatccctctgaaaaatgtttttcttctctctccacaactgcaccctct
gctgcggtgtctccgacagcatttgccaagaagttcgaggtgctgttttgcggccgtgtg
agcgttgctgacaagaaggcccctcctgccctgattgatgagtgcatcgagaagtttagc
cagtcacatggctcagggacgtgtgataaagggagaaatagcgggggattggtgggtggg
ctgaggagggcgttaaccttgccacccaatgggctcgggagtgatggcattggtaatggt
gctgcaggtagcccgaccactgggaagcgacctgtcctgtttaaaagagaccccagcttt
ccctgtctgcaggccctggatgagaatggactctcaccagagatctctcacaccagcact
actgatgcacacgcccactctgctggagtacagcccaccagcctgaaggagaacaggacc
atgctgtttacggtgggccggtctcaggtcttcttggttagtccagacactaagaaagtt
gccatagaaaagagtttcagggaaatatccttctgctcacagggtattcgtcacgtggat
cactttggctttatttgcagggagaccgtggaaggagggagctgccactttgtctgctat
gtcttccagtgcactgacgaatcactggtggatgagatcatgctgactttgaagcaggcg
ttctctgtggcagccctgctgcagaatgcaaagacccagagccagcagtgtgacagctgc
cccatgcagcagttccacaaactgtgtgagaggattgaaggtctatacccatctaaaacc
aagctggagcttcagaaacacttggccactctggataaccaggagcaagcttcggtcttt
gaaaacactatgagggctcgtcctaagagcgaccaggaggagaatgagttggtgatggcc
tccttgaggaacctgtatgaggagaaacagaggagccatcagcacacactgcctggagac
agcaaacaggtgtgtgaggagggagctccggccccagtggaggcgcagcagcagagtagc
agtcgacagcggcttgagcagttcaagagccgagccaagcgctctctcacggagtccctg
gaggggatctggaaggggagcagcaaagccagagctcagagggacaacagcgtaggaagt
gacagcggctcttccatttgtacagtcaacagcagccaggaccagccttgtctagatgat
cccttgcctgcctcctcccagctgcgacccaccagccccctcaggtgccacaactcaaca
ggagacctgaagcacatggattcctctctgcccctgtcgatgtcctcctcctctttacct
gatgacgctcagccgcaaggcttccgcaaacgggccagcaccttcagccaccctccctcc
ctttcctccgcagaggactcgtcagtgcatatactaattcacacgcaacaggaccctact
gcagctaccaagcccaagcttgtacggcactactccgtcagcaccgacagtccacaccag
agcaaacaatcccaaaacgactccacccttcctcctgttcctccctgccctttgtctctc
tctcctctcctccctcatcatccttcctcaccctctactggagcccggctcaataaaaga
agtcctctcagtggtctgcgtgctcgtctccactcctcctcctctgtccctaattttctg
aaatttcaatttctggcccctgtccaagagaacgattgtcctgagcgaaagagcagtgat
gtagcagctctgtccacaagtgcagcttgtggggtaggggaaagtcctctgcgcagccac
cgccactcatggaggcaacagatcttcctgagggttgctacacctcagaagaacacagaa
accaatgagcggggggatccctgtctagaggggggtcgagtgtgcgtgggccaggtggga
attggaggaagtggtgacttgtccataagtgtggtgcctgaggagaggacaaagaggagc
aaagaggagctgagggagctctggaggaaggccatcctgcagcagatcctgctgcagagg
atggagatggagaaccagaaactacaggcctcggagagcgatcttcagaacaagcgtctg
aagctggactacgaggaaatcactccgtgtctgaaggaggtcactctggtctgggagaag
atgctggggacccccgggagggcaaaagtcaaatttgacaaagagaccatacatgctgct
gttgcacaaggtgtgccaaggcaacatcgaggcgagatctggaagtttctctctgagcag
tacctgctcaggcagacggtaccctcccgccccccaaccaatcacactccgtacaaagat
ctgctgaaacagctcacctcgcagcagcatgccatcctcatagatctgggtcgcactttt
cccactcatccatatttccaagcccagctgggggccggacagttgtctctgtataattta
ctgaaagcctactcattgctggaccctgaggtgggctactgccagggcctgtccttcatt
gctggagtgctgctgttacacatgggggaggaggatgccttcaacatgctcaaatttcta
atgtatgatgtgggactccgcaaacagtacagacccgacatgattatcctgcagattcag
atgtaccagttgtcgcggctgcttcacgactaccacagggatctttacagccacctggag
cagcaggagatcgggcccagcttatacgccaccccctggtttctcaccgccttcgcctcg
cacttccccctcggcttcgtggccagagtctttgatatgttgttcctgcagggatccgag
gtcatctttaaggtggccttaagcctgctggggagccacaagcctttgatcctgcagcat
gagcacctggagtccatagtggacttcatcaagaccacactgcctaacctgggcctggtg
cagatggagaaaaccatcaaccaggtttgtgagatggacgtgtccaagcagctccaggcc
tatgaggtagagtaccatgtgttgcaggatgagctgctggacacgcccccgtccctcaac
caacaccagcgaactgcacagttggagaggaccaatcagagcctccgacagcagaacctc
gacctgcttgaggagctgcaggtgtcacatgctcgcgtctgcagcttggagagccgagtg
gaggcttttgcccagtcagagggccggctgaggcagcaggtttctgcactggaggaggag
aagaagcagctagtgagcaccgtcacacgcctccaggacctcctcaccagactcggaata
cacaccacccttgatggacacatactcccccagcctctgaaagacatacagcaaatgtgg
aagacagagagggaccggcgaacaggactgtggactcccttccccaccctttggatcttc
cagagggttcataactgcacctaa
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