Micropterus salmoides (largemouth bass): 119899185
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Entry
119899185 CDS
T07309
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119899185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msam03021
]
119899185
03036 Chromosome and associated proteins [BR:
msam03036
]
119899185
Transcription machinery [BR:
msam03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119899185
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
119899185
Chromatin remodeling factors
BAF complex
119899185
PBAF complex
119899185
GBAF(ncBAF) complex
119899185
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
119899185
NCBI-ProteinID:
XP_038569581
LinkDB
All DBs
Position
Unknown
AA seq
1676 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSSHSMMGPSPGPPSSGHSQPGPS
GYGQDNMHPLHKPMESMHEKSMSEDSRFSQMKGLSMRPGGHSGMGPPPSPLDQHSQGYHS
PLGGSDHSSPVPSNGPPSGPLMPSSSSSSSSGGPGSASAPLDGPSVDQHTLGPNNRSGPP
GSSGPGPSPGPSLGSSVTSLGTGLESGGPTGPVGPGGPTPFNQNQLHQLRAQIMAYKMLA
RGQPLPDHLQMAVQGKRPMPGMQQPQPMPSLVPGAGGGPGGGPAGPGPGPMGTGYSRAHG
MMGPNMPPPGPSGIPAGMQGQNPNGPPKSWSEGPMVNAAAPSNAPQKLIPPQPTGRPSPA
PPSVPPAASPVMPPQTQSPGQPAQPTPMMPYHAKQNRITPIQKPCGLDPVEILQEREYRL
QARITHRIAELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETAL
DAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSIT
GKMQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLL
QQTDEYVANLTELVRAHKAAQALKEKKKKKKKKKKLEIAEGQAPALGPDGEPLDETSQMS
DLPVKVIHVDSGNILTGLDAPKAGQLETWLEMNPGYEVAPRSDSEDSEEEEEEEEEEEEP
QPSSALVEDKKKITDPDSEDVSEVDVRHIIENAKQDVDDEYSGAAFARGLQSYYSVAHAV
TEKVEKQSSLLINGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLME
NKRLNGPYLIIVPLSTLSNWVYEFDKWAPTVVKVSYKGSPAARRAFVPQLRSGKFNVLLT
TYEYIIKDKQVLAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPLQNKL
PELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLR
RLKKEVEAQLPEKVEYVIKCDMSSLQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNT
IMQLRKICNHPYMFQQIEESFSEHLGFSGGIVQGPDLYRASGKFEVLDRILPKLRATNHK
VLLFCQMTSLMTIMEDYFAYRNFKYLRLDGTTKAEDRGMLLKTFNDPGSEYFIFLLSTRA
GGLGLNLQSADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAA
KYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDEVWGQEVCLRMNEEDEVPDDE
TVNQMIARSEEEFDQFMRMDLDRRREEARNPRRKPRLMEEDELPTWIMKDDAEVERLTCE
EEEEKMFGRGSRQRKEVDYSDSLTEKQWLKSVFPVQAIEEGTLEEVEEEVRHKKTTRKRK
RDRDLDLPGPSSSSGGRGRGDKDEDGKRQRKRGRPPAEKLSPNPPALTKKMKKIVDAVIK
YKDSTSGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRGHRYRSLGDLERDVML
LFQNAQTFNLEGSLIYEDSIVLQSVFTSLRQKIEKEEESEGEESEEEEEELEEGSECESR
SVKVKIRLGRKDKGGDRGKGRSRRTGRTRAKPVVSDDDSEDEQEEEHSPSATDEET
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactccagatccccccatgggaggcactcctcgtccaggtccttcccctggtcca
ggtccctcccctggtgccatgctgggacccagccccgggccctccccaggctcctctcac
agtatgatgggccccagccctggccctccctcctctggacactcccagccagggccctct
ggatatggccaggacaacatgcaccctctgcacaaacccatggagagcatgcatgagaag
agtatgagtgaggacagccgcttcagtcagatgaagggactgtctatgagaccgggcggg
cacagtgggatgggcccaccaccgagtcctcttgaccaacactcgcagggttaccactct
ccattaggtggctctgaccactcaagccctgtcccttcaaatggtcctccctccggacct
cttatgccatcatcctcttcttcttcctcgtctggtggtcccggctctgcttctgcacct
ttagatggccccagcgtagatcaacacactctgggtcccaataaccggtctggccctcca
ggtagctctggcccaggccccagccccgggcccagtcttggctccagtgtcaccagcctc
ggaacaggccttgaatctggaggccctacaggtcccgttggtccgggtggccctaccccc
ttcaaccagaaccaacttcaccaactcagagcccagatcatggcctataagatgctggcc
cgggggcagcccctgccagaccacctccagatggctgtgcaggggaagaggccgatgcct
gggatgcagcaaccgcagcccatgcccagcctggttcctggagccggcggcgggccagga
ggtggaccagcaggaccagggcccgggccaatgggcacaggctacagccgagctcacgga
atgatgggtcccaacatgcctcctccaggcccatcggggattccagctgggatgcaggga
caaaacccaaatggacctcccaagtcctggtcggaaggccccatggtgaatgcagcagcc
ccctccaatgcaccccaaaagctgattccccctcagcccactggccggccctctcctgcc
cctccttctgttccccccgctgcctccccagtaatgcctccacagacccagtcccccggc
cagccggcacagcctactcccatgatgccttaccacgccaagcagaaccgcattaccccc
attcagaaaccctgcggcctcgacccagtggagatactacaggagcgagagtacaggtta
caggcccgtatcactcatcgtattgctgaactggagaacctgccgggttctctggctggt
gatttacgtaccaaagctactatagagctcaaagccctccggcttcttaacttccagaga
cagctgcgtcaagaggtggtggtgtgcatgcgtcgtgacacagctctggagaccgccctt
gacgccaaggcctacaagcgaagcaaacgtcagtctctgcgagaggcccgcatcacagag
aaactggagaaacagcagaagattgagcaggagcgcaaacgcaggcagaaacatcaggag
tacctcaacagcatcctgcagcacgccaaagacttcaaagagtaccaccgttccatcaca
ggcaaaatgcagaaactgaccaaggctgtggccacctaccatgcaaacactgaacgggag
cagaagaaagagaatgagcgtattgagaaagagaggatgaggaggcttatggctgaggat
gaggaaggctatcgtaaactgatcgaccagaagaaggataagcgtctggcctacctgctg
cagcaaaccgacgagtatgtcgccaacctcactgagctggtcagagctcataaagctgca
caggccctcaaggagaaaaagaagaagaagaagaaaaagaagaagttggagattgctgag
ggtcaggctcctgccttaggtcctgatggagagcctttggatgagacgagtcagatgagt
gacctgcctgtgaaggtcatccatgtagacagtgggaacatcctgacaggactggacgcc
cctaaagctggacagctggagacctggctggagatgaaccctggttatgaggtggcgccc
cgctcagacagtgaagacagcgaggaggaggaagaagaggaggaggaagaggaggagcct
cagccatcctctgctctggtggaggataagaagaagattacagatcctgacagtgaagac
gtgtcagaggtggatgtccgacacattatcgaaaatgctaaacaggatgtggacgacgaa
tatagcggtgcagcatttgcccgtgggctccagtcttattattctgtggctcacgctgtc
acagagaaggtggagaaacagtccagtttgttaataaatggacaactcaaacagtatcag
attaaaggtctggagtggctggtttccctctacaacaataacctcaatgggatcctggcg
gatgagatgggtctgggaaaaaccatccaaactatcgccctcatcacgtacctcatggaa
aacaaacgactcaatggaccctacctcatcattgtacccctctcaactctttctaactgg
gtgtatgagtttgataagtgggcaccgacagtcgtgaaagtgtcctacaagggatctcct
gctgccagaagagccttcgtcccccagctgcgtagtggcaagtttaacgttttactcacg
acttacgagtacatcatcaaggacaaacaagtattggccaagattcgttggaaatacatg
atcgtggatgagggccaccgtatgaagaaccaccactgtaagctgacccaggtcctgaac
acccactacctggccccccggcgagtcctgctgacgggaacgccgctccagaacaaacta
cctgagctctgggcgttgctgaatttcctgctgccgaccatattcaagagctgcagcacc
tttgagcagtggttcaacgcccctttcgccatgactggagagaaggttgatctcaatgaa
gaggagaccatcttgattatccgtcgtctccacaaagtgcttcgccctttcctgttacgc
agattaaagaaggaagtggaggcacagcttccagagaaggtggaatacgtgatcaagtgt
gacatgtcgtctcttcagagggtgctgtacaggcacatgcaggccaagggggtcctactc
actgacggatcagagaaagacaagaagggtaaaggaggcacaaagacgctgatgaacacc
atcatgcagctgaggaagatctgtaaccacccttacatgtttcagcaaatagaggaatcc
ttctctgaacatttaggattctctggtgggatagtccagggtcctgacctgtatcgggca
tcaggcaagtttgaagtgttggatcgaatcctgccaaagctgagagccacaaaccacaaa
gtgctgctcttctgtcagatgacctcactcatgaccatcatggaagactactttgcatat
cgcaacttcaagtatctgcgtctggatggcactacaaaggctgaggatagaggaatgtta
ctgaagactttcaatgacccaggatctgagtactttatcttcctcctgagcacaagagcc
ggaggcctcggcctcaacttgcagtctgccgacactgtggttatttttgactctgactgg
aacccacatcaggacctgcaggctcaggaccgagcccaccgtatcggtcaacaaaacgag
gtgcgtgtgctgcgtctctgcactgtcaacagtgtggaggaaaaaatcttggccgctgcc
aagtacaaactgaacgtggaccagaaggtcatccaggccggcatgttcgatcagaagtct
tccagccatgagcgcagggccttcctgcaggccatcctggaacacgaggagcaagacgag
gtctggggtcaggaagtgtgtctacgcatgaatgaggaggatgaggtgccagacgacgag
acggtcaaccagatgattgccaggagtgaggaggagttcgaccagtttatgcgtatggac
ctggaccggcgtcgcgaggaggcccgtaacccgcggcgaaaacctcgtctaatggaggag
gatgagctgcccacttggatcatgaaggatgacgctgaggttgaacggctgacctgcgag
gaggaggaggagaaaatgtttggaagaggttctcggcagcgaaaggaggtggactacagc
gattcgctgactgagaagcagtggctcaagtctgtctttcctgtgcaggctatcgaggag
gggacactggaggaggtggaggaagaggtacgacacaaaaagacgacccgcaagaggaag
cgcgaccgcgacctggatctccctggtccctcctcttcctcggggggacgaggacgaggc
gacaaagatgaagatgggaagaggcagaggaagagggggcgaccgcctgctgagaaactc
tcccccaaccccccagccctcacaaagaagatgaagaagatcgtggacgctgtcatcaag
tataaagacagcaccagcggacggcagctgagcgaggtgttcatccagctgccgtctcga
aaagagctgccagagtactatgaactgatccgcaagcctgtggacttcaggaagatcaag
gagaggattcgaggtcatcgctaccgcagtctgggtgacctggagagagacgtcatgctg
ctcttccaaaacgctcagaccttcaacctggaaggatcactgatatatgaagactccatc
gtcctccagtcagtgtttaccagtttgaggcaaaagatcgagaaggaggaggaaagcgag
ggagaggagagtgaagaagaggaagaggagctggaggaaggatcagagtgcgaatctcgc
tcggtgaaagtgaagatccgtctggggaggaaggataaaggtggagatcgagggaaggga
cgcagcaggcgaacaggacgcaccagagccaaacctgttgttagtgatgacgactctgag
gatgagcaggaagaggagcactcccccagtgccactgatgaggagacctga
DBGET
integrated database retrieval system
