Micropterus salmoides (largemouth bass): 119899253
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Entry
119899253 CDS
T07309
Symbol
usp43a
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43a
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msam01002
]
119899253 (usp43a)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119899253 (usp43a)
Enzymes [BR:
msam01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119899253 (usp43a)
Peptidases and inhibitors [BR:
msam01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119899253 (usp43a)
Ubiquitin system [BR:
msam04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119899253 (usp43a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5104
Motif
Other DBs
NCBI-GeneID:
119899253
NCBI-ProteinID:
XP_038569699
LinkDB
All DBs
Position
Unknown
AA seq
1231 aa
AA seq
DB search
MDTRKENKVRKPMKPKTTKRKENKYKTGRFARRKSVRSFGNFMGRILKTLGTLAHFGDVE
PPDAEDDDGGFGRSASGGFKDDSSQISREGTVKKSNTVSSTHGSVKDRLSWCYGDKTPGV
LGLKNHGNTCFMNAVVQCLSNTDLLAEYLGLEQYKSDISHRRVNGEVRGEERQTARGEVT
EQLASLVRALWTLEYTPQLSVDFKSTVAKYSSQFRGNSQHDALEFLLWLLDRVHEDANSS
PNNNSSSSSSKTKANAKGPSSLEDPSSPSSASTQQPQNRHSFVQEHFQAQYRSSLTCPHC
LKQSNTFDPFSCISLPIPLRQTRPICVTLVFSSKGQRYLRVGLAVPLFGPLSCLRTMVAE
EGNISPDQVILSELYSTGFQRSFSDDDDLTAVADSDVVYAFQAPPLYSRGGSAPHSGYHH
SLPSSPYTSTAGPDGQRLPPSGTLSSEYLNQGGSRKVLLLICNTAGSGQQAVRFGPPFLM
HEDRSISWDQLQQSILSKLYYLMLNGSQAQNAGVFFKIRVVGGSASYSYLSPQDSRPLYH
PAVDRALKFCGPGGPAHVKIVLEWEHKTKECLFGSIQEEVVKDAESVRNQQQQHLQQHSC
TLDECFQLYTKEEQLAPDDAWKCPHCKQLQQGMVKMSLWTLPDILILHLKRFRQVGERRN
KLSTLVRFPLTGLDMAPHVVKRSQSMKNLNSGAWPPTLKQPSGQHLQPADMILPHEYLYD
LYAVCNHHGGMHGGHYTAYCRNSVDGQWYSYDDSSVDLVPEEEVCTRGAYILFYQRRNTI
PPWSASSSVRGSTSSSMSDHWLIRLTGDSKRGSLVSRSSTACPSSIPDSPESPVFLENGS
KEERGGFENRPFIRGLQGRSVSMRAPSKTKDTLSKVLPMRWSLGSKDRRKPDPVPQSAQD
PAPVELVQYLESGRRPRCTKDPIVTLMSEPRSTKEAAGGRAAANVRSSSVGSISCVGKTG
NELPYEAAQVPEGQRRLSDKTGSLRRSKGSQTRDDRTMNISSSSNSNTLTRRKDARKQSS
SKISLDTETKRSSSAGVQPSFSTPSLQDGTLRRQKGDRVDTEHHGTFEGNSKTKKGEIPK
SHDGLLSFFKGNFLKKDKDSRKSKECESGKGVGEEGGRRTLSRLSLSNGAAVGGTGVEGR
KSNGHLSDALANGKVGRTTSDIKRSQSSSNIPTKAEQSVRRTASLHRTGMPTAPALSRSL
TTDKPSYGTLQRTRYSTTSLGRKRTVPESSF
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atggatacccgcaaggaaaacaaggtaaggaaacccatgaaaccgaaaacgacgaagcga
aaagagaataaatacaaaaccgggaggtttgccaggaggaagtcggtgcgatcttttggg
aatttcatgggaaggatccttaaaactttgggcactttggcgcactttggcgacgttgaa
ccgccggacgctgaggacgacgacggcggcttcgggcgaagcgcttctgggggtttcaaa
gacgactcgtcgcagatctccagggagggcaccgtgaagaagagcaacacggtttcctcc
actcacggctcggtgaaagacaggctgtcgtggtgctacggcgacaaaacccccggggtg
ctgggactgaagaaccacggcaacacctgtttcatgaacgccgtggttcagtgcctcagc
aacacggacctgctggccgaatacctcgggctggagcagtacaagtcggatataagccac
cggagggtgaacggggaggtgagaggcgaagagaggcagaccgccaggggagaagtgacc
gagcaactggcgtcgctggttagagcgctgtggacgctggaatacacgccgcagctgtct
gtggacttcaagagcactgtggccaagtacagctctcagtttcggggaaactctcagcat
gatgccctcgaattcctcctctggcttttggacagagttcatgaagatgctaattccagc
cccaacaacaacagtagcagcagcagcagcaagaccaaagccaacgcaaagggacccagt
tcattggaggatccttcaagtcccagttcagccagcacacagcagcctcaaaacagacac
agttttgtccaggaacacttccaggctcagtacaggtcctctcttacgtgccctcattgc
cttaagcagagcaacacctttgacccattttcatgtatctccctgcctattcccctacga
caaaccaggccgatatgtgtgacgctggtgttcagttcaaagggtcaaaggtacctgcgg
gtagggttggctgtacctctctttggtcccctgtcctgcctgcgaaccatggtggcagag
gagggcaacatctccccagaccaggtcatcctatcagagttgtactccacgggtttccag
cgttcattttccgatgatgatgacctgacagcagttgctgatagcgacgtcgtttacgct
tttcaggctcctcccctctatagtcgtggaggctctgcaccgcactcagggtatcaccac
agcctcccctcctccccttacacctctacggccgggcctgatggtcagaggttacctcca
tctggcaccctctcctctgaatacctgaaccagggaggctccagaaaagtcctcctccta
atctgcaacacagcaggatctggccagcaggctgtcaggtttggacctccatttctcatg
catgaggacaggagcatctcctgggaccagctgcagcagagcatcctcagcaagctctat
tatttgatgctgaatggatctcaggctcagaatgctggggtgttctttaagatcagagtt
gtgggaggctctgcatcctacagctacctgtccccacaggacagcaggccactgtaccac
cctgccgttgacagagctctgaagttctgtggccccgggggtcctgcccatgtgaagatt
gtccttgagtgggagcacaagactaaagaatgtctgtttggcagcatccaggaggaggtg
gtgaaggatgcagagagtgtgaggaaccagcagcagcagcacctgcagcagcatagctgt
accttagatgagtgcttccagctgtataccaaagaagaacagcttgccccagacgatgcc
tggaagtgtccccactgtaagcagcttcagcagggaatggtgaagatgagcctctggact
cttcctgacatactgatcctccatctcaagcgcttccgacaggtaggtgagcggaggaac
aagctgtcaaccctggtgcgcttccccctgactggtttggacatggcccctcatgtagta
aagaggagtcagagtatgaagaacctgaactctggggcctggccacctaccttgaagcag
ccttcaggccaacacctccaacctgccgacatgatcctcccccacgaatatctgtacgac
ctctacgctgtgtgtaaccatcatggaggaatgcatggaggacattatactgcttactgt
aggaactcagtggatggacagtggtatagctacgatgacagcagcgtagacctggtgcca
gaggaagaagtatgtaccagaggagcctacatcctcttctaccagagacgcaacaccatt
cctccatggtcggccagttcctccgtcagaggatctacaagttcatcaatgtcagatcat
tggctaatccgcttgacaggggacagtaagagaggcagcctggtgtctcgatcctctact
gcctgcccatcttccatacctgactcacccgagtctccagtcttccttgagaatggttct
aaagaggaaagagggggttttgagaacaggccatttatcaggggtcttcagggacgcagt
gtgagcatgagagcccccagcaagaccaaggacaccctgagcaaagtgcttcctatgcgc
tggtccttgggttcaaaggacagacggaaacctgatccagtgcctcagtctgcccaagat
cctgcccctgtggagctcgtacagtacttggaatctggcagacggccccgttgcacaaag
gatcctatagtaacattgatgagcgaaccacgcagtacaaaggaagctgctgggggccgg
gctgcagccaatgtccgatcttccagcgttgggagcatcagttgtgtgggtaagacagga
aatgagctgccatacgaggctgcacaggtcccggagggccagaggaggctgtcagataag
acaggcagtttgagacgcagcaaggggagccagacaagagatgacaggaccatgaatatc
agcagtagctctaacagtaacaccctcaccaggaggaaggatgccaggaagcagagctcc
tccaaaatctccctggatactgagacaaaaaggagttccagtgctggagttcagcccagc
ttcagcactcccagccttcaagacgggactttgagaagacaaaaaggggacagggtggat
acggaacaccatggtacatttgaaggaaactctaagaccaaaaaaggagaaattcccaag
agccatgatggactactctccttcttcaaaggtaatttcctgaagaaagataaggactca
aggaagtccaaggagtgtgagtcagggaaaggagtaggtgaggaaggaggcagaaggacc
ctctctaggctgtcactgtccaatggagcagcagtaggaggaactggggtggaaggacgc
aagtctaatggccatctgagtgatgcactggcaaacggtaaggttggacgaaccacatct
gacatcaaacgctcccagagttcatccaacatccccaccaaagcggagcagagcgtgcgt
aggacagcatctttgcatcgtaccgggatgcctacagccccagcactgtcccgcagcctg
acaacagacaaaccgtcttatggcaccctgcagaggactcgttacagcacaacctcgctg
ggacgcaaaaggacagtcccggagtccagcttctga
DBGET
integrated database retrieval system
