Micropterus salmoides (largemouth bass): 119899363
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Entry
119899363 CDS
T07309
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam02010
ABC transporters
msam04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
119899363
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119899363
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msam02000
]
119899363
Transporters [BR:
msam02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
119899363
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
119899363
NCBI-ProteinID:
XP_038569826
LinkDB
All DBs
Position
Unknown
AA seq
2271 aa
AA seq
DB search
MAVSTQLGLLLWKNFTYRRRQTIQLLIEIVWPLFIFFILISVRVHYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRNPTPGESPGVVGNFNDSIISRLFTDAKKILLYSQNDK
SYEGYRGLLRALRKLQKNTARFKLKDFLRDNETLSHFLHHNASLPHHALKQIVEADVNLE
KVLTKGFGFHLRDLCNTTPLEEFVHIADRNVSRLTQDIICKSSSDWLNKAQSHFLSNLDF
FKPIRRDVRSDPKVVQEVSAATDQLLESLGALVVELSSMKSWKDMRKEILYLTANATGSP
NQMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNHGNDSDGEHHSAYDNSSTPYC
NNMMRSLESSPISRMIWRALKPLLMGKILYTPDTPATQRIIQEVNKTFQELGVLRDLGGM
WDEMRPKVWNFMENGEEMDLVRTLLQNNASAAFFNAQLAGTEWRVSDMSDFLSKASEDLR
PAGSAYTWRDVFNETDQAIQTISRFMECVNLDKLEPVANEERLVNKSMGLLSNQKFWAGI
VFPDIAHSNSTNLPPNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYVWGGFSY
LQDVIEHGIIRAITGTKEKTGIYIQQMPYPCYVDDVFLRVMSRSMPLFMTLAWMYSVAII
IKGVVYEKEARLKETMRIMGLNNGTLWLSWFISSIIPLLISASLLVVLLKMGNLLPYSDP
GVVFLFLASFGIVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGA
KLVVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLASPLEEDSYNLTTSICLMLFDAVLY
GIMTWYIEAVFPGQYGIPRPWYFPFTKSYWCGEEENKNLSTPVTKKGNAEAVCIEEEPSH
IEPGVYIENLVKVYSHGNKLAVDGLSLRFYNGQITSFLGHNGAGKTTTMSILTGLFPPTS
GTAYILGKDIRSELSTIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLPEEKVKAEMEQ
IVNDVGLPHKRQARTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLL
LKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTHLGTGYYLTLVKRDY
DLTLQSCRNSASTVSYSKKTEKEDSVSESSSDAGLGSEPESETTTIDVSLISNMIFKHVP
EARMVEDLGHELTYVLPYQSAKDGAFVELFHELDDRLTDLGISSYGISDTTLEEIFLKVA
EDSGVDSVELSDGVVPTRTRRHHAFGDHQSCLKPFTEDDFDFNDSEGDPESRETDWLSGT
DGKGSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPF
GKYPSLALDPSMYGEQFTFISNDLPEDPHINKLLGALTENSGFGTRCMEGKPIPDTPCTA
LEDEWSVPQVSQTVKDMFNKGNWSMENPSPLCECSCEGRKRMLPECPAGAGGLPPPQRKI
SDKDTLQNLTGRNVSDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGARSSYFQSHTDEI
DDAITQLRRRFHLERGTAADRFFHSLSSFIQGLDTKNNVKIWFNNKGWHSIGSFLNVMNN
GILRANLQAGKDPSKFGITAHNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPAS
FVVFLIQERVNKAKHMQFISGVQPLLYWLANFVWDMCNYIVPATLVIIIFVCFQQDAYVS
STNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELF
GSNEIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGK
NLFAMAIEGVIFFSITVLIQYHFCFKSRSSTSHLKPIGEEDEDVARERQRILSGGGQSDI
LELRQLTKIYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSVVTGGEAY
LAGKSVNTEIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVAEWGIRK
LGLVKYVDKSAGSYSGGNMRKLSTAIALIGGPPVVFLDEPTTGMDPKARRALWNAILSII
KEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGPDPD
LRPVMEFIEHELPGSTLKEKHRNMLQYQLPTSLTSLARIFSLLSTNKEALSIEDYSVSQT
TLDQVFVNFAKDQSDEDHLKDVHLNKRDAVVVDISQVNSFLTESKTRESCV
NT seq
6816 nt
NT seq
+upstream
nt +downstream
nt
atggcagtctccactcaactgggtttattgctttggaagaacttcacctaccgaaggaga
cagacaatccagctgctgattgagatagtctggccccttttcatcttcttcatcctgatc
tcagtccgagtacattatccaccctatgagcaacatgaatgccatttccctaacaaggcc
atgccctcagctggtaccctgccctgggtacaaggcatcatctgtaatgccaacaacccc
tgcttccgtaatcctacccctggcgagagtcccggggtggtgggaaacttcaacgattct
ataatctcccgtctcttcactgatgccaagaagatcttgctgtactctcagaatgataaa
agctacgagggctacaggggactgttgagggccctcaggaagctgcagaagaacactgct
cgcttcaagctgaaggattttctgcgggacaatgagaccctttcccacttcctgcaccac
aacgcctcacttcctcatcacgcgctaaagcagatagtggaggctgacgtcaatctggag
aaggtgctgactaaaggtttcggcttccatctcagagacctctgtaacaccacgccgctg
gaggagtttgtccacattgccgaccgcaacgtgtcccgtctgactcaagacattatctgc
aagtcctccagtgactggctaaacaaggcccagagccacttcttgtccaatttggacttc
ttcaaaccgattcggagggatgtgaggtcggaccccaaagtcgttcaggaagtctcagct
gcaaccgaccagcttctggagagcctgggagcactggtcgtggagctttccagtatgaag
agttggaaggatatgcgtaaggagatcctgtacctgactgcaaacgccacaggctctcca
aaccagatgtaccaggctgtgtcacgtatcgtctgtggccaccccgagggaggcggcctc
aaaatcaagtctctcaactggtatgaagacaacaactacaaggccctgttcggaaaccat
ggcaacgacagcgacggtgaacatcactccgcttacgacaactcttccactccctattgt
aacaacatgatgcgaagcctggagtccagccccatttccaggatgatttggagagctctg
aagcctctgctcatggggaagatcctgtacaccccagatactccagcaacacagagaatc
atccaagaggttaataagactttccaggagcttggtgtgctaagggaccttggagggatg
tgggatgaaatgaggcccaaagtttggaacttcatggagaatggcgaggaaatggacttg
gtcaggaccctgctccagaataacgccagtgccgcgttctttaatgcccagctcgctggg
actgagtggcgtgtctcagacatgtcagacttcctgtccaaggcctcagaggacctaaga
cctgcaggatccgcctatacctggagagacgtcttcaatgaaaccgaccaggccatacag
accatttcacgcttcatggagtgtgtgaacctggacaagctggagccggtagctaatgag
gagagactggtgaacaagtccatgggtcttctgagtaaccagaaattctgggctggaatc
gtgtttcctgacatcgcccatagcaacagcaccaacttgcctcccaacgtcaactataag
atccgcatggacattgacaatgtggagaggacaaacaagattaaagacggctattgggac
cccggtcccagggcagacccctttgaggatcttcggtacgtctggggcggattttcttac
ctgcaggacgtcattgagcatggaatcatcagagccatcactggcacaaaggaaaagaca
ggcatctacattcagcagatgccctacccctgctatgttgatgatgttttcctgcgcgta
atgagtcggtcgatgcctctcttcatgaccttggcatggatgtactcagtagctatcatc
atcaagggcgtggtttacgagaaggaggcacggctgaaggagaccatgaggatcatggga
ctgaacaatggcaccctgtggctcagctggttcatcagcagtataatcccgctcctgatc
agcgccagcttgttggtggtattattgaagatgggcaacctgctgccttacagtgacccc
ggagtggtgtttcttttcctggcgtccttcggcatagtaaccatcatgcagtgtttcctc
atcagcaccctgttctctcgtgccaacttggcagctgcctgcggtggaattatatacttt
actctctaccttccctacgtgctttgtgtcgcctggcaagactacgtgggctttggagca
aaacttgtagtgagtctgctgtctcctgtggcttttgggtttggttgtgagtactttgcc
ctgtttgaggagcaaggggtcggcattcagtggtcaaacctgctggcgagccctctggag
gaggacagctacaacctgaccacctctatctgcctcatgctgtttgacgccgtgttgtat
ggaataatgacctggtacatcgaagctgtgttccctggtcagtatgggatccccaggcct
tggtatttccctttcactaagtcatactggtgtggagaggaagagaacaagaacctctcc
acccctgtgacaaagaagggcaacgctgaagctgtgtgtattgaggaggagccgagccac
atcgagccaggtgtttacatcgaaaatctggtgaaggtctacagccatggaaacaagctg
gctgtggacggattgtccttgaggttctataacggacagataacatccttcctcggccac
aacggagctggcaagaccacaactatgtcaatcctgacgggcttgtttccacccacctct
ggcacagcctacatcctcggcaaggacatccgcagtgaactcagcaccattcggcagaat
ctaggcgtctgtccccagcacaacgtacttttcagcatgctgacagtggaggaacacatc
tggttctacgcccgcctgaaggggctgccggaggagaaggtgaaggctgagatggaacag
attgtgaacgatgttggactgcctcacaaacgacaggcccgcaccagcacgctgtctgga
gggatgcagaggaagctgtcagtggctctggcttttgttggtggctcaaaggttgtgatc
cttgatgaacctactgctggtgttgatccctacgcacgcaggggcatctgggacctgctg
cttaaatacagacaaggccgcaccatcatcctgtccactcatcacatggatgaggctgac
attctgggtgaccgcatcgccatcatctcccatggcaagctgtgctgcgtaggctcctcg
ctcttcctgaagacccatctgggcacgggctactacctgaccctggtcaagagagactac
gatttgacacttcagtcctgcaggaattctgccagcaccgtctcctacagcaagaagaca
gagaaggaggacagtgtatcagagagcagttcagatgctggtcttggcagcgaaccagag
agcgaaaccaccaccattgacgtgtccctcatctccaacatgatattcaagcatgtcccc
gaggctcgcatggttgaggaccttggccacgaactcacctatgtcttgccctaccagtca
gctaaagatggagcctttgtagagctcttccacgagctggatgaccgactcaccgacctg
ggaatatctagctatggaatatctgataccaccctggaggagatcttcctcaaagtggcc
gaggacagtggagtggattctgttgagctttcagatggagttgtgccgaccaggactcgt
cgccatcatgcttttggagaccaccagagctgcctgaagcccttcactgaggacgatttt
gatttcaacgactctgaaggtgacccagaatcccgtgagactgactggcttagtggaaca
gatggcaaaggttcataccaggtcaaaggctggagtctaaagagacagcagtttgttgca
ctactctggaaacgattcctctatgcccgacgctccaggaaaggcttctttgctcagatt
gttcttccggcggtgtttgtgtgtattgccctggtgttcagtctgattgttccaccattt
ggaaagtacccaagtctggctctggatcccagcatgtatggagaacagtttaccttcatc
agtaatgacttacctgaggacccacacatcaacaaactacttggagccctgacagaaaac
tcaggatttggaacacgctgtatggaaggaaaacctataccggacactccctgtacagca
cttgaggatgagtggtctgtcccacaagtctctcaaactgtgaaggacatgttcaacaaa
ggcaactggtccatggagaatccctctcccttgtgtgagtgcagctgtgaaggacgcaag
aggatgctcccggagtgtccagctggtgctggggggcttccaccaccacagaggaaaatc
agtgacaaagatactcttcagaatttgaccggcagaaacgtctcagactatctggtgaaa
acctacgctcaaatcattggcaagagcctgaagaacaagatttgggtcaatgagttcaga
tacggtggattctcgctgggcgccaggagctcttactttcagtcccatactgatgaaatc
gatgatgcaatcactcagctgaggagacgcttccatctggagagaggaactgcagcagat
cgtttctttcacagtctctccagttttatccaaggattggacaccaagaataacgtcaag
atctggttcaacaacaagggctggcacagcatcggttctttcctcaatgtgatgaacaat
ggcatcctacgggcaaatctgcaagccggcaaagacccctcaaagtttggcatcactgcc
cacaatcacccgctcaacctcaccaaggagcagctgtcacaagtcgcattgatgacgaca
tcagtagatgtactagtttccatctgtgtgatcttcgccatgtccttcgtccctgccagc
tttgtggtcttcctcatccaggagagagtgaacaaggccaaacacatgcagttcatcagt
ggagtgcagcctctcctctactggctggccaacttcgtttgggatatgtgtaactacatc
gtcccagccacactggtcattattatctttgtgtgtttccaacaagacgcctacgtctcc
tccaccaatctgcccgtgctggccttgctgctgctgctctacggatggtccatcacccct
ctgatgtaccccgcctcgttcttctttaagatccccagcacggcctacgtggttctgacc
agcgttaacatactgataggaatcaacggcagcgtctccacatttgtactggagctgttt
ggaagcaatgaaattggtggtatcaacgacatcctgaagaacgtgttcctcatcttccct
cacttttgtctgggcagaggactgattgacatggtgaagaatcaggcaatggctgatgct
ttggagagatttggtgaaaaccggttccgctcccctctggcctgggacatggtgggaaag
aacctgtttgcaatggctatagagggcgtgatcttcttctccatcaccgtcctcatccag
taccacttctgcttcaagtccaggtcatccaccagtcacctgaagcctattggagaagaa
gatgaggacgtggctagagagcgacagaggatcctgagcggaggaggtcagtcagacatc
ctggagctcagacagctcaccaagatttacaagcggaaacagaagccggcagtggaccgg
ctgtgcgtcggcatcccccctggagagtgttttggtttgctgggggtgaatggggcaggg
aaaaccagcacctttaaaatgctgactggagactctgtggtcactggtggagaggcctac
ctggctggcaagagtgtaaatacagagatagatgaggtgcatcagaacatgggctactgt
cctcagtttgatgccatcaacgacctgctgactggcagagaacacctcgagttttatgcc
atcctgagaggggtgccggagaaggaagtctgtgaggtggcagagtggggcatccggaag
ctgggcttggtcaaatatgttgacaagtcagcgggcagctacagtggaggaaacatgagg
aaactgtctactgccatcgctctcataggaggaccgcctgtagtctttctggatgaacca
acaacaggcatggacccgaaggcacgtcgtgctctgtggaacgcaatcctgagcatcatc
aaagagggacgatctgtagtcctgacttctcacagcatggaggagtgtgaggcactttgc
accagaatggccatcatggtcaatggcaggttccgctgtttgggcagtgtgcaacatctc
aaaaacaggtttggggatggctacactatcatcctgcgggtggctggcccagacccagac
cttcggccggttatggagttcatcgagcatgagttgcctggcagcacactgaaggagaaa
caccgcaacatgctgcagtaccagctgcccacctccctcacctccctcgcccgcattttc
tccctgctctctacgaacaaggaggcgctcagcatagaggactattccgtctctcagaca
actctagaccaagtgtttgtaaattttgccaaggaccaaagtgatgaggaccatttgaaa
gacgtccatctgaacaagcgggacgctgtggtagtggacatttcccaggtaaactctttc
ctcacggaaagcaagacgagggagagctgcgtctga
DBGET
integrated database retrieval system
