Micropterus salmoides (largemouth bass): 119899410
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Entry
119899410 CDS
T07309
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
119899410 (shoc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_LRWD1
LRR_13
LRR_9
LRR_NLRC4
Motif
Other DBs
NCBI-GeneID:
119899410
NCBI-ProteinID:
XP_038569883
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MSSTLGKEKDSKEKDPKGGPAGKEREKEAKALASLVKDGGKETKTKGKDAKEGKKDTSSS
TPGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHMLPTSIK
ELTQLAELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLPDSLDSLKKLRMLDLRHNK
LREIPAVVYRLTSLTTLYLRFNRITTVEKEIRNLSKLTMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIP
RSLARCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKLVLTN
NQLSTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtactttaggcaaagaaaaagattcgaaagaaaaggaccccaaaggtggtcca
gcggggaaagaaagggaaaaggaggccaaggctctagccagcttagtcaaagatggtggc
aaagaaacaaagaccaaagggaaagatgccaaagaaggaaagaaggacaccagcagctca
acaccaggtgttgccttctctgttgacaatacaataaagcggccaaacccggcaccaggt
acacgcaagaagtccagcaatgccgaggtgatcaaagagctcaacaagtgccgagaggaa
aactcaatgagactggacttatctaaacggtccattcacatgctgcccacctcgattaag
gagttgacgcagctggctgaactctacttatacagcaacaagctgcagagtctgccagcg
gaggtaggttgcctatcaggcctggtcactttggccctgagcgagaactccctgactagt
ttgcctgactccctggactcccttaagaagcttcgaatgctcgacctccggcacaacaag
ctgagagagatacctgctgttgtctaccggctgacgtctctgaccacgctgtacctgcgg
ttcaaccgtatcacaacagtggagaaggaaatccgaaacctatccaagctcactatgctc
agcattcgtgagaacaagattaaacagctgcctgcagagataggggagctatgcaacctc
ataactctggatgttgcccataaccagctggaacacctaccgaaggagattgggaattgc
acacagataaccaaccttgacttgcagcacaatgagctcctggacctcccagagactata
ggcaatctggctagcataaatcgcttaggtctgagatacaaccgattgtcagccatcccc
aggtcactagccagatgtcgagaactggaggagctaaaccttgaaaacaacaacatttca
gtgttgccagagggcctactgtcgagtttggtcaacctgaccagtctaacactggcaagg
aactgcttccagtcgtatcctgtgggtggaccatcccagttctccaccatctactccctc
aacatggagcacaaccgcatcaacaagatcccctttggtatcttctccagggccaaagtt
ttaagcaagcttaacatgaaggacaaccagttaacgtctctgccactggactttggcaca
tggactagcatggtcgagcttaaccttgccaccaatcagctgacaaagatcccagaggac
gtctgcggtttagtctctctggaggtgttaatattgtcaaataatcttctcaagaagttg
ccacatggtattgggaatttgagaaagctacgggagctcgacttggaggaaaacaagttg
gaatgtctacctaatgaaattgcttatcttaaagacttacagaaattggtgctgacaaat
aatcagctgagtacgttacccagaggcatcggccacctcaccaacctgactcaccttggt
ttgggggagaacctgctgcagcaccttccagaggagattggtacactggagaacttggag
gaactgtacctcaacgacaaccccaacctgcacagcctcccgttcgagctggccctctgc
agcaagctgtccatcatgagcatcgagaactgtcccctcagccacctgccgccccagatt
gtcgcgggaggcccctccttcatcatccagttcctcaagatgcagggaccataccgtgcc
atggtctga
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