Micropterus salmoides (largemouth bass): 119899467
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Entry
119899467 CDS
T07309
Name
(RefSeq) zgc:136908
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04137
Mitophagy - animal
msam04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119899467
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
119899467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119899467
03009 Ribosome biogenesis [BR:
msam03009
]
119899467
04131 Membrane trafficking [BR:
msam04131
]
119899467
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msam04147
]
119899467
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
119899467
Ribosome biogenesis [BR:
msam03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
119899467
Membrane trafficking [BR:
msam04131
]
SNARE
SNARE associated proteins
Others
119899467
Autophagy
Aggrephagy
Other aggrephagy associated proteins
119899467
Exosome [BR:
msam04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119899467
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_5
AAA_33
CDC48_2
AAA_22
AAA_2
TIP49
Vps4_C
RNA_helicase
AAA_14
AAA_28
NPHP3_N
Parvo_NS1
nSTAND3
ATPase_2
Mg_chelatase
DUF815
AAA_7
ATPase
AAA_18
IstB_IS21
ABC_tran
AAA_17
NACHT
AAA_24
TsaE
ResIII
Sigma54_activat
Viral_helicase1
NB-ARC
PhoH
SLFN-g3_helicase
Cytidylate_kin
KAP_NTPase
Zot
AAA_6
Motif
Other DBs
NCBI-GeneID:
119899467
NCBI-ProteinID:
XP_038569960
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MPGSRGADPKGEDFSTAILKQKHRPNRLIVDEALNEDSSIVSLPQNKMEELQLFRGDTVV
LKGRKCRQTVCIVLTDDTCGDERIRVNRVTRNNLRVRLGDIISIHACPDIKYGKKIHVLP
IDETIEGLTGNLFEVFLKPYFLEAYRPVHKDDIFLVRGSMRAVEFKVVETDPSPHCIVAP
DTVIYCEGEPIKREDEEESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPGLFKTIGVKPP
RGILLYGPAGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP
AIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDSALR
RFGRFDREIDIGIPDSTGRLEILQIHTKNMKLGDNVDLERIATETHGHVGADIAALCSEA
ALQAIRKKMVLIDLEDESIDADLLNSLAVTMDDFEWALSQSNPSALRETIAEVPQVNWQD
IGGLDEVKRELQELIQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQAN
FVSIKGPEMLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKSRGGGGGDAGGAAD
RVINQILTEMDGMSDKKNVFIIGATNRPDIIDAAILRPGRLDQLIYIPLPDKPSRRAILN
ANLRKSPVARDVDLEYLSGITDGFSGADLTEICQRACKLAIREAIEAEIKAERQRQNRPG
IPMDEDFDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFSQTLQQSRGFGNFRFPSATG
TRSGGQESGSGSGLYREEGNDDLYQ
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgccaggctcaagaggagctgacccaaagggagaagacttctccaccgccatcctcaag
cagaaacacagacccaacagactcattgtggacgaagctctcaatgaagacagcagcatt
gtcagcctgccacagaataagatggaggagctgcagctcttccggggtgacacggtggtg
ttgaaagggcggaagtgtcgccaaacggtgtgcatcgtcctgactgatgacacctgtggg
gatgaacgaatccgcgtgaatcgtgtgacgcgcaacaacctacgcgtccggctcggtgac
atcatcagtattcatgcctgccctgacatcaagtatgggaaaaagatccatgtcctccca
atagatgaaaccattgagggcctgacgggaaacctctttgaggttttcctcaaaccgtat
tttctggaggcttaccggcccgtacataaagatgacatcttcttggtgagggggagcatg
cgggcggtggagttcaaagtggtggagactgaccccagccctcactgcattgttgcccca
gacactgtcatctactgtgagggagaacccatcaaaagagaggacgaggaggagagcctt
aatgacatcggctacgacgacatcggaggctgccggaagcagctggcccagatcaaagag
atggtggagcttcctctcagacaccccgggcttttcaagactataggagttaagcctccc
agaggtatcctgctgtacggccctgcaggcacaggaaagaccctggtggcccgggcagta
gccaacgaaactggtgccttcttctttctcattaatggtcctgaaatcatgagcaagctg
gcgggagagtcagagagcaacctaagaaaggcatttgaggaggcggagaaaaatgctccg
gccatcatctttattgatgagctggatgccatcgctcccaagagagagaagacacatggt
gaagtggagaggcgtatagtctcccagctcctgaccctgatggatggtctgaagcaaaga
gctcatgtggtcgtcatggcagccacaaaccggccaaacagcgtggactctgctctgaga
cgcttcggcaggtttgaccgggagattgacattggaatccctgattcgaccggcagactg
gagatcctgcagattcacaccaaaaacatgaaactgggtgacaacgtcgacctggagagg
atcgccacagagacccacggtcatgtaggcgccgacatagctgctctgtgctcagaagct
gctctgcaagccatccgcaagaagatggtcctcatagaccttgaggatgaatccattgac
gctgacctgctcaactcgctggctgtcaccatggatgactttgaatgggcgctgagtcag
agcaacccatcggctctgagagagactattgcagaggtgcctcaggtgaactggcaggac
atcggaggactggatgaggtcaagagagaactgcaagagctcatccagtaccctgtggag
tatccggacaagttcctgaagtttggcatgactccatctcgtggagtattgttttatggt
cctccaggctgtgggaaaactctactagccaaggccatcgccaacgagtgccaagcaaac
tttgtctccatcaaaggacctgagatgctcaccatgtggtttggagaatcagaggccaat
gtcagagacgtgtttgataaggccagacaggcggccccctgtatcctgtttttcgacgag
ttagactccattgccaaatccagaggaggcggaggtggggatgcgggtggtgcagctgac
agagtcatcaaccagatactcacagagatggacggcatgtccgacaaaaagaacgttttc
attattggtgccacaaacagaccagacatcatagatgctgccatcctgcggccgggccgt
ttggaccagctcatctacatcccgctcccagacaaaccatctcgtagagcaatcctaaac
gccaacctacgcaagtcccctgtggcacgggacgtggaccttgaatacctgtctggcatc
acagatggtttctctggagctgacctgacagagatctgccagcgggcttgcaagctggct
atccgtgaggccatcgaggccgagatcaaggctgagcgtcagaggcagaacagaccaggc
atccccatggatgaggactttgatccagtcccagagatcaggaaggaccactttgaagag
gcgatgcgatttgcccgtcgctctgtcagtgacaacgacatccgcaaatatgaaatgttt
tctcaaactctgcagcagagccgaggttttggaaactttaggttcccatctgctactgga
acccggtctggaggtcaggagtcaggttctgggtcaggcctgtacagagaggaaggcaat
gatgatctctaccagtga
DBGET
integrated database retrieval system
