Micropterus salmoides (largemouth bass): 119899583
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Entry
119899583 CDS
T07309
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119899583 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msam03021
]
119899583 (taf5)
03036 Chromosome and associated proteins [BR:
msam03036
]
119899583 (taf5)
Transcription machinery [BR:
msam03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119899583 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
119899583 (taf5)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
119899583 (taf5)
STAGA complex
119899583 (taf5)
TFTC complex
119899583 (taf5)
SAGA complex
119899583 (taf5)
SLIK complex
119899583 (taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
TFIID_NTD2
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_VPS8
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Tricorn_2nd
PEP5_VPS11_N
Beta-prop_Nup120_160
WD_LRWD1
LisH_PAC1
VPS8_N
eIF2A
PROPPIN
Beta-prop_ACSF4
Beta-prop_WDR11_2nd
CDK5RAP3
LisH_TPL
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
119899583
NCBI-ProteinID:
XP_038570129
LinkDB
All DBs
Position
Unknown
AA seq
754 aa
AA seq
DB search
MAAVQGGMADTYEEKDIKTEPSNDGCGNNNANDGRAPPGRDSTSPGSSAPAGSNKTPAAA
PEDQQTLLAVLQFLRKNKLTESVEILRREAGLPEDSLDLKGGDSSATSSAGAAGTVAVEG
ADASALLSRVTGSSSATAPPPTKAAPGEDQPDVNVVLSAYSQQGDPALYGVYYSGLKRFI
ESVLDCHRAELSQVFYPLFVHMYLELVYNNHENEAKVFFEKFSGDQECYYEEDLRILSSL
TKKEHMRGNETLLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGM
PRSKSQIDAMSGSLAGEAKREANKAKVYYGLLKEPEIELPLDDEDEEAENEEGKPKKKKP
KKDSMGSKSKKQDPNAPSQTRIPLPELKDSDKLDKIMYMKESTKRIRLGPDNLPSICFYS
FLNAYQGLTAVDFTDDSSLIAGGFADSTVRVWSVTPKKLRKVKSAADLNLIDKESDDVLE
RIMDEKTASESKILYGHSGPVYGISFSPDRNYLLSSSEDGTIRLWSLLTFTCLVGYKGHN
YPVWDTQFSPHGYYFISGGHDRVARLWATDHYQPLRMFSGHLADVTCTRFHPNSNYVVTG
SSDRTIRLWDVLNGNCVRIFTGHKGPIHALAFSPNGKFLASGATDGRVLLWDIGHGLMIA
ELKGHTDTIYSLKFSRDGEILASGSMDNTVRLWDAMKAFDDLETDDFTAATGHIHLQDNS
QELLLGTYMSKSTPVVHLHFTRRNLLLAAGAYNP
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtacaaggtggtatggccgacacgtacgaagaaaaagatattaaaacggaa
ccatcaaacgatggctgtggaaataataatgcaaacgacggcagggcgccccccggcaga
gactccacgtcccccggctccagtgctccggctgggagtaacaaaactccggcggcagcc
ccagaggatcagcagacgctgctggcagtcctgcagttcctcaggaagaacaaactgacc
gagtccgtcgaaattttgcgtcgtgaagcggggttaccggaggattccctggacctgaag
gggggcgactcctccgcgacaagctcggctggtgctgcgggcactgtggccgtagaaggc
gcggacgcgagcgctcttctcagccgggtgaccggctcgtcctccgctacagccccgccg
ccgaccaaagcagctcctggcgaggatcagccagacgtcaacgtggtgctgtcagcttac
agtcagcagggagaccccgcactgtatggggtttactacagtggcctgaagaggttcata
gagtcggttttggactgtcaccgagcagaactgtcccaggtcttctacccactgtttgtc
cacatgtatctggagctggtgtacaacaatcacgaaaatgaggccaaggttttctttgaa
aagttcagtggggaccaagagtgctactacgaagaggacttgcgtattttgtccagcctg
accaagaaggagcacatgagaggcaatgagaccctgctggacttccgcaccagcaagttt
gtgctgcggatctcgcgtgactcttaccagctgctgaagaggcacctgcaggagcgtcag
aacaaccagatctggaatatcatccaagagcacctctacattgacatctttgatggcatg
ccgcgcagcaagagccaaattgatgccatgtctggcagcttggcgggagaggccaagcga
gaggccaataaggctaaggtttattatggactgctgaaggaaccagaaattgagctgcct
cttgatgatgaggacgaggaggcagagaatgaggagggtaaacccaagaagaagaaaccc
aaaaaggacagcatgggctccaagagcaagaagcaggatcctaatgcaccttcacagact
aggatacctcttccagaactaaaggactcagacaagctggacaagatcatgtacatgaaa
gagtccaccaagaggatccgcctgggaccagataacctcccctccatctgcttctactct
tttctcaacgcctaccagggtctgactgcagtggacttcacagatgactccagcctgatt
gcaggaggctttgcagactctacagtgcgcgtgtggagtgtcacaccaaaaaagctccgc
aaagtcaagtctgcagcagacttgaatctgatcgacaaagagtcagacgacgtgctggag
aggatcatggacgagaagacggccagcgagtcaaagattctctatggacacagtggccca
gtgtatggcatcagctttagcccagacagaaactacttgttgtcaagttctgaagatggg
acaatcagactgtggagtctcctaacatttacttgtctggtgggctacaaaggccacaac
tacccagtgtgggacacccagttttccccgcatgggtactatttcatttcagggggacat
gacagagttgcccgtctctgggcgacagatcactaccagcccctgcggatgttttctggt
cacctagccgatgtcacttgcacccgcttccacccaaactccaattatgtcgtaacaggg
tcgtctgatcgcaccatccggctctgggatgtcctgaacggaaactgcgtccgcatcttc
accggtcacaagggtcctatccacgcactggctttctctcccaatgggaagttcttggct
tcaggggccaccgatggcagagttcttctgtgggacattggtcacggactgatgatcgca
gagcttaaaggccacacagataccatctactccctcaagttcagcagagacggcgagatc
cttgcctccggctccatggacaacactgttcgtctgtgggatgctatgaaagcatttgat
gatttagagactgatgatttcacagcagctacaggacacatccatctacaagataactcc
caggaacttctgctgggcacctacatgtctaaatccacacctgtagtacaccttcacttc
acccgcaggaacctgctgctggctgccggggcctataatccatga
DBGET
integrated database retrieval system
