Micropterus salmoides (largemouth bass): 119899607
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Entry
119899607 CDS
T07309
Symbol
tmc5
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msam02000
]
119899607 (tmc5)
03037 Cilium and associated proteins [BR:
msam03037
]
119899607 (tmc5)
Transporters [BR:
msam02000
]
Other transporters
Pores ion channels [TC:
1
]
119899607 (tmc5)
Cilium and associated proteins [BR:
msam03037
]
Other cilia and associated proteins
Stereociliary proteins
119899607 (tmc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
119899607
NCBI-ProteinID:
XP_038570154
LinkDB
All DBs
Position
Unknown
AA seq
964 aa
AA seq
DB search
MTSYSNGGFFNPAYHDSDTLEIDRRSSSKTHYTNPYPREDPTWRDEGAAMHYSSTGQTSG
DDAVARVPWGGWQEESWRGIESIPMGLISTRPGSPSWQHDLNHSTFQIPPESQYDRSSSA
RLPSSTSGNMTMRWRGISMRRMSMFPNADPAHLAFTEDAIRNEMENEEQNLVKELVALST
RDRIRAIRELPMSFDEKKHIRSQVLAFKSYKQSRQFTCFADCSENVSLSFRRCGYSIRSA
RQTLELWQGIMKEIGGKFGTSVLSYFLFLKWLLVFNIFSFVVNFGFITIPLLVSDPSPDI
PLNVSFRGLEILTGAGYFTYTVMYYGGYSNKTLVGLVEYNMQLAYFFTIAVYMVLCGIAL
IYSMASSFKNNYVLADPSSNSAWQLLSSWDFSITNERAVRQRKNNIRVQLKESLSEKAQR
ELLTLSEKLKHSGVYLGSWLLSTSLAFGCGASIYYLCQYEQQQATDSANWSLLQEAETLL
VPFVVSLMNLVVPLFYSLFNKFEHYSNQRRQIYALVVRNVLLKMSILAVLCYYWMNEVAK
KFSCWESMVGQALYRLVIVDFLFLMLGSFFGEFLSNVIGTRLLPRLGVPEFDVARNVLEL
IYAQTLAWIGIYFSPLLPAIQILKFFILFYLKKVSLTQNCQPPRRAGRAAQMQTIFIALL
FFPFFVGALSIVAYTAWRLTPSEQCGPFRGLNTTFSVVGVWIGDLENIPGSQWAVWIYQN
VIRSEIFYFLITLIIIVIIYIFWQVSQGRRQLIGKLRQQIINAGKDKSFLLEKLQNLQKS
QPNKKSIQRNPKNHTKRRSDDHFSGGQSNSNAMVQALLARQQLEDEEKVERRSGVPVPSD
ISTSSALAQAMLARQGADDQDEGLYWMHDKHPSSSSALAQAMQARRRAQVQEGEEYYSTE
VFSESPVNTSVSNVMMQVMQRAEEEDRMQWAPAPPQNPAPAGSSALIQAMLARQQAQNEY
DDGY
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgacaagttacagcaacggaggattcttcaaccctgcctaccatgacagcgacactctg
gaaattgatagaaggtcttccagcaaaacccactacactaacccttatcccagggaagac
cccacttggcgggatgagggggcggccatgcattactcatcaactggtcagaccagcggt
gatgatgctgtggccagagtaccctgggggggctggcaggaggagagctggagagggatt
gagagcatccccatgggcctcatctcaacgcgccctgggagtccttcatggcagcatgac
ctcaatcacagtacgttccaaatcccccctgaatctcagtatgatcgatcgtcttctgct
cgacttccttcttcaacgtcaggtaacatgacaatgagatggaggggaatttcaatgaga
aggatgagcatgtttcctaacgctgatcctgcccatctagctttcacagaggatgccatc
aggaatgagatggagaacgaggaacagaacctggtgaaggagcttgttgccctgtcaaca
cgagaccgaattcgggccattcgggaacttccaatgagctttgatgagaaaaaacatatc
aggagccaagtactggcgttcaagtcttataagcaatctcgccagttcacgtgttttgcc
gattgctctgagaatgtgtcactgtctttccgcaggtgtggctacagtataaggtcagcc
aggcagaccctggagctatggcaaggcattatgaaagagatcggcgggaagtttggcact
agcgtcctctcctatttcctgttcctcaagtggctgcttgtgttcaacattttctccttt
gtcgtcaactttggctttatcaccatcccgctgcttgtttctgacccctcacctgacata
cctctgaatgtgagcttcagaggactggagatactgactggagctggttacttcacctac
acagtcatgtattatggaggctatagcaacaaaactctggtgggtctggtggagtacaac
atgcagttggcctatttcttcaccattgcagtctacatggtgctgtgtggaattgcactt
atttacagcatggccagctctttcaagaacaactatgtactagcagacccatcttcaaac
agtgcatggcagcttctgtccagctgggatttcagtattaccaatgagagagcagtgaga
cagcgcaagaacaacatacgtgtccaactcaaggagtctttgtcagagaaggcccagagg
gagctgctaaccctttctgaaaaactgaagcactctggggtttatcttggttcctggctt
ctctccaccagcttggcttttggctgtggagctagcatctattatctctgccaatatgaa
cagcagcaggcaacagattctgccaactggtccctgcttcaggaggcagagactctcctg
gtcccctttgtggtgtctctgatgaacctggttgtcccgctcttctactccctcttcaac
aagtttgagcactactccaaccagcgtagacagatatatgctctagtagtcagaaatgtg
ttgctcaagatgtctattcttgctgtcttgtgttattactggatgaatgaggtggcaaag
aagttttcgtgttgggagtccatggtgggacaggctttgtaccgtctggtcattgttgat
ttcctttttctgatgttgggatccttcttcggagagtttcttagcaatgtgattgggacg
agattactaccacgtctgggggttccagagtttgacgtagccagaaatgtccttgaactc
atctacgcacagaccctagcctggattggaatatacttctctcctctgctgcctgccatc
cagattctcaaatttttcatcttgttttatttaaagaaggtcagcctgacccagaactgc
cagcctccgcggcgggcaggcagagcagctcagatgcaaactattttcatcgccctcctc
ttcttccctttctttgtgggagctctgtctatagttgcatacactgcatggaggctgact
ccctcagagcaatgtggtccttttcggggtctcaacactaccttcagcgtggttggagtt
tggataggggatctggagaatatccctggttctcagtgggccgtctggatctaccaaaat
gtcatcagaagtgaaatcttctactttcttatcacactcatcatcattgtcattatatac
atcttctggcaagtctctcagggccgtaggcagcttattggtaaactgagacaacagatc
attaatgcagggaaagacaagtcctttctgttagaaaagctccagaacctccagaaatct
cagcccaataaaaaatccatacagaggaatccaaaaaaccacaccaaacggcgttcagat
gaccacttctctgggggtcagtccaactcaaacgccatggtccaggccttactcgctcgc
cagcagcttgaagatgaggagaaggtagagaggcgcagcggagtgcctgttccctcagac
atctccacctccagcgctttggctcaggccatgctggcccgtcagggagctgacgaccag
gatgaaggtttgtactggatgcatgacaaacacccgtcatcctccagcgcccttgcacag
gccatgcaagccaggcggagagcacaggttcaagagggagaggaatactacagtacagaa
gttttttctgaaagccctgtcaacacatctgtgtcaaatgtgatgatgcaagtcatgcag
agagcagaggaagaggacaggatgcagtgggcccctgctcccccacaaaacccagctccc
gcaggctccagcgctcttatacaggccatgttggcccggcaacaggcccagaatgagtat
gatgacggttactaa
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integrated database retrieval system
