Micropterus salmoides (largemouth bass): 119899668
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Entry
119899668 CDS
T07309
Symbol
rnf38
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119899668 (rnf38)
Enzymes [BR:
msam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119899668 (rnf38)
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119899668 (rnf38)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
119899668
NCBI-ProteinID:
XP_038570246
LinkDB
All DBs
Position
Unknown
AA seq
739 aa
AA seq
DB search
MPIAAAGQPPTQEPRVCPRLPSTPEPVPKGADLFDEAGAAESAERTEYGGAEGGRGLVGY
SYSQNGARGFVQPGSINGSPPQSPAASSSFLFHPFHPHQMAMEPPRTRSRSRSGYYQQYG
GGNGNGITGSGVMGSNHHHHQQQQLHPQQQQQHGTGCAPLGAHGNHPENQPRAPGSNVSP
GIQRLSSVPGAHRIPAAGASGGSYHCHPDHAYGEESDKSEESPSPKRQRLSSQSVLEQLT
SSAPPPSTPSPPIRPWESGPPSRRQPHPHTHYHQERCLTPARHRRSPPARRQRGRLSRPT
RHLPPHQHSSTQGPTPRLSPSELQDENYHRNLHPSTHPTYPTHTPSAYGQPPPAGGGGAG
LEDPRAFHPPTLSPRLLHPAAHHHHHHQQQQHHVTQQQQGAMVMDLHEQLQQGSVPVSYT
VTPVPPHGLAAPLCSGQHLPPTCSSQQVPACSMVFSTGQHYHPMLQACSMQHLPVPYAFP
SLLSSDPQFLLPHPPHLSHHPTHLPTPGQFLPFQTQQPRSPLQRIENEVELLGEQLSVGG
GFSYAHHHHHHHHHQPPSTLPPSTPLQFLSHHDPLSQELFTVPYPHFMPRRFTSRRYRSQ
QAVPPSPYHPSFLPYFLSMLPVPPNVAPTISLELDVDEGEVENYEALLNLAERLGEAKPR
GLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKA
NRTCPICRADASEVQRDSE
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgccaatcgcagccgctggacagccaccgactcaggagcctagagtttgcccccggctg
ccctccaccccggagcctgtccctaaaggggctgatttattcgacgaggcgggggcggcg
gagtcggcggagcgaacagagtacgggggcgcggaggggggcagaggactcgtgggctat
agttacagccagaacggcgctaggggctttgtacagcccgggtccatcaacggctctccg
ccgcagtccccagccgcgtcctcctcttttctcttccacccttttcacccccaccaaatg
gccatggagcccccaaggactcgatcgcgttcacggtctggatattaccaacagtacggt
ggtgggaatggtaacggaattaccggcagcggtgtcatgggatctaatcaccaccaccat
cagcagcagcaactacatccacagcagcagcagcagcacggtaccggttgcgcaccactt
ggagctcacggcaaccacccggagaaccagccgcgagccccaggaagtaacgtctccccc
ggcatccagaggctgtcttcggttcccggagcgcaccgcataccggcggcaggagcctcc
ggcgggtcctaccactgccacccagatcatgcatatggagaggagagtgataagagtgag
gaaagccccagtccaaagcgccagaggctgtccagccagtctgtcctggaacagctaacc
tcatctgcccccccaccatccaccccatctccccccatccgcccctgggagtcaggaccc
ccaagtcggagacaacctcacccccacacacactaccaccaggagagatgcctcactcct
gctcggcacagacgcagcccgccagcaaggagacagcgcggtcgactctccagacctacc
cgtcacttgcctccccatcaacactcctccacccagggccccacacctcgcctgtcgcca
tcagagctccaggatgaaaactaccaccgcaacctccatccctccacacacccgacatac
ccaacacacacacctagcgcctatggtcagcctcccccagctggagggggaggggcaggt
ctggaggacccccgagcttttcacccccccaccttgtccccacgactactgcatcctgct
gctcaccaccaccaccatcatcagcaacaacagcatcatgtgacgcaacagcagcaagga
gccatggtcatggacttgcatgaacagctgcagcaggggagtgtaccagtctcctacaca
gtgaccccagtgcctccacacggtcttgcagcgcctttgtgtagcggccagcaccttccc
cctacctgttcctcacaacaagtccccgcctgcagcatggtcttcagcactggacagcac
taccacccgatgctacaggcatgttcaatgcaacatttgccggtgccctatgcctttccc
tcactgctatcaagtgaccctcagttcctgcttccccatccaccccacctctctcatcac
ccaacccacctccccacacccggacagttcctgcctttccagacgcaacagcctcgatcg
cccttacagaggattgaaaatgaggttgagcttctgggagagcagctttctgtgggtgga
ggctttagctacgcccaccatcaccaccaccaccatcaccaccagcctccctccaccctg
ccgccctccacaccactccagttcctctcgcaccatgaccctctgtcacaggagctcttt
acagtgccctatcctcactttatgcctcgccgattcacaagtcggcgttaccgctctcag
caggctgtacccccgtcaccctatcaccccagcttcctgccttacttcctgtccatgctt
cctgtgcccccaaatgtggcccccactatcagtctagagctggatgtggacgaaggagag
gtggagaactatgaggccctgttgaacctcgcagaacgtctaggagaggctaagccccgt
ggtctaactaaggcagatatagaacagcttccatcatacaggttcaaccccaacaaccat
cagtctgagcaaacactgtgtgtggtatgtatgtgtgacttcgagtctcgccagctccta
agggtcttgccctgtaatcacgaattccacgccaagtgtgtagacaagtggcttaaggct
aaccgaacctgtcctatctgtcgagccgacgcctctgaggtccagcgggattctgagtga
DBGET
integrated database retrieval system
