KEGG   Micropterus salmoides (largemouth bass): 119899878
Entry
119899878         CDS       T07309                                 
Name
(RefSeq) calpain-1 catalytic subunit-like
  KO
K01367  calpain-1 [EC:3.4.22.52]
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam04141  Protein processing in endoplasmic reticulum
msam04210  Apoptosis
msam04217  Necroptosis
msam04218  Cellular senescence
msam04382  Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:msam00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    119899878
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    119899878
   04217 Necroptosis
    119899878
   04218 Cellular senescence
    119899878
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    119899878
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:msam01002]
    119899878
Enzymes [BR:msam01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.52  calpain-1
     119899878
Peptidases and inhibitors [BR:msam01002]
 Cysteine peptidases
  Family C2: calpain family
   119899878
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III EF-hand_6 EF-hand_7 EF-hand_1 CAPN13-like_C_EFh
Other DBs
NCBI-GeneID: 119899878
NCBI-ProteinID: XP_038570624
LinkDB
Position
Unknown
AA seq 702 aa
MFGGVSGRIQKERQRAGGLGSVQQAVLYQNQDYQALKEDCLQNRSLFQDPLFPAEPASLG
FKELGPFTAKTRGVEWKRPTELTERPQFIVGGATRTDICQGALGDCWLLAAIGSLTLNER
LLHRVVPHGQSFDREYAGIFHFQFWQFGEWVDVVIDDRLPVKDGELLFVHSAEGSEFWSA
LLEKAYAKLNGSYEALSGGSTTEGFEDFTGGVSEMYELKKAPKDLHRIISKALERESLLG
CSIDITSAFDMEAVTFKKLVKGHAYSVTGLTQVEYRGRQERLIRIRNPWGQVEWTGAWSD
NSSEWSAVDSAEKDELLCKMEDGEFWMSFQEFLRQFSRLEICNLTPDALSEDSTRFWSTV
MFEGGWRRGSTAGGCRNNPNTFWINPQYKISLLEEDDDPEDDEAACSFLVALMQKDRRRY
RRQGQDVHTIGFAIYEIPEEYRGCPSVHMKKDFFLRHSSCARSETFINLREVSARLRLPP
GEYLIVPSTFEPSKEADFVLRVFTEKQSETKEMGDDVEATFDEEEEVTESDVDDSFRSMF
AQLSGDDMEISVRELRTVLNRVVSKHRDLQTDGFSMESCRAMVSLMDKDGSARLGLLEFQ
ILWNKIKKWLGIFREFDLDKSGSMSSYEMRLALENGGFKLNNKLYQTLVARYADNEMIDF
DNFTCCLVKLEAMFKTFQELDRDATGSVEMNIIEWLYVTMCG
NT seq 2109 nt   +upstreamnt  +downstreamnt
atgttcggaggcgtgtcgggccggatccagaaggaacggcagagagctggaggtctgggc
tcagtccagcaggccgtactctaccagaaccaggactaccaagccctgaaggaggactgt
ctgcagaatagatccctgttccaggacccattgttccccgctgaaccggcctcactgggt
ttcaaggaactcggaccgttcaccgccaaaaccagaggggtggagtggaagagacccacg
gagctgacagagaggcctcagttcatcgtgggcggagccaccaggaccgacatctgtcag
ggggcgctgggagactgctggctgctggccgccatcggctctctgactctgaacgaacgg
ctgctgcatcgtgtggttcctcacggccagagcttcgaccgcgaatacgccggcatcttc
cacttccagttctggcagttcggcgagtgggtggacgtggtgatcgacgaccgtctgccg
gttaaagacggagagctgctgttcgtccattcggctgaaggcagcgagttctggagcgcc
ctgctggagaaggcctacgccaagttgaacggctcgtacgaggcgttgtccggcggcagc
accactgaaggtttcgaggactttacgggcggtgtgtcggagatgtacgagctgaagaaa
gctcccaaagatcttcatcgtatcatcagcaaagctctggagagagaatccctgctgggc
tgctccatagacatcaccagcgccttcgacatggaggcggtgaccttcaagaagctggtt
aaaggccacgcctactctgtaaccggactcactcaggtggagtaccgcggccggcaggag
cgtctgatccggatcagaaacccctggggtcaggtggagtggaccggagcctggagcgac
aactcctcagagtggagcgccgtcgactctgcagagaaagacgagctgctctgcaagatg
gaggacggagagttctggatgtctttccaggagttcctgcgtcagttctcccggctggag
atctgtaatctgacgccggacgctctcagcgaggactccaccaggttctggagcactgtg
atgtttgagggcggctggcggagaggaagcaccgccgggggctgcaggaacaatccaaac
acgttctggatcaaccctcagtataagatctccctgctggaggaggacgacgaccccgag
gacgacgaggccgcctgcagcttcctggtggctctgatgcagaaagaccgccgccgctac
cgccgccaaggccaggacgtgcacaccatcggcttcgccatctacgagattcctgaggag
taccgaggctgtccgagcgtccacatgaagaaggacttcttcctgcgccactcctcctgc
gctcgctctgagaccttcatcaacctgcgagaggtgagcgccaggctccgcctcccgccg
ggtgagtacctgatcgtcccgtcgaccttcgaaccctccaaggaggccgacttcgtcctg
agggtgttcaccgagaaacagtccgagaccaaggagatgggcgacgacgtggaggccacc
tttgatgaagaggaggaagtcacagagagcgacgtggatgactccttcaggtccatgttc
gctcagctgtctggagacgacatggagatctcagtgcgagagctccggaccgtcctcaac
cgagtcgtgtccaaacaccgagacctgcagactgatggtttcagcatggagtcctgcaga
gccatggtcagcctcatggacaaagacggcagcgctcggctcggcctgctggagtttcag
attctctggaacaagatcaagaagtggctgggaatcttcagagagttcgatctggataaa
tcaggatctatgagctcctacgagatgcgtctggcgttggaaaacggcgggttcaaactg
aacaacaagctgtaccagacgctggtcgctcgatacgccgacaacgagatgatcgacttc
gacaacttcacctgctgcctggtcaaactggaggccatgttcaagaccttccaggagctg
gaccgggacgccacaggaagtgtagagatgaacatcatcgagtggctgtatgtgaccatg
tgtggctga

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