Micropterus salmoides (largemouth bass): 119899889
Help
Entry
119899889 CDS
T07309
Symbol
eif4a3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03013
Nucleocytoplasmic transport
msam03015
mRNA surveillance pathway
msam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119899889 (eif4a3)
09122 Translation
03013 Nucleocytoplasmic transport
119899889 (eif4a3)
03015 mRNA surveillance pathway
119899889 (eif4a3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119899889 (eif4a3)
03041 Spliceosome [BR:
msam03041
]
119899889 (eif4a3)
03009 Ribosome biogenesis [BR:
msam03009
]
119899889 (eif4a3)
03012 Translation factors [BR:
msam03012
]
119899889 (eif4a3)
Enzymes [BR:
msam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119899889 (eif4a3)
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119899889 (eif4a3)
mRNA cycle factors
Stress granule specific factors
119899889 (eif4a3)
Spliceosome [BR:
msam03041
]
Complex C
Other components
EJC/TREX
119899889 (eif4a3)
Ribosome biogenesis [BR:
msam03009
]
Eukaryotic type
90S particles
Helicases
119899889 (eif4a3)
Translation factors [BR:
msam03012
]
Eukaryotic type
Initiation factors
eIF-4
119899889 (eif4a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
Flavi_DEAD
TniB
Motif
Other DBs
NCBI-GeneID:
119899889
NCBI-ProteinID:
XP_038570646
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MAAAGTQGRKRLLREEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQ
QRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKV
LLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVSGTPGRVFDMIRRRSLRTRAIKMLV
LDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVS
SMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI
GRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggccggtacgcagggcaggaagaggctcctgcgggaggaggacatgaccaag
gtggagtttgagaccagcgaggaggtggatgtgacccccaccttcgacaccatgggcctc
cgggaggacctgctccgcggcatctacgcttacggttttgagaagccgtcggccatccag
cagcgagccatcaagcagatcatcaaaggccgagacgtcatcgcccagtctcagtctgga
acaggaaagaccgccaccttctgtgtgtcggtgctgcagtgtctcgacatccaggtgagg
gagacccaggctctgatcctcgctccaaccagagagctggcgggacaaattcagaaggtg
ctgctcgctctgggagactacatgaacgtccagtgtcacgcctgcatcgggggaaccaac
gtgggcgaggacatcaggaagctggactacggtcagcacgtggtgtccgggacgcccggg
cgggtgtttgacatgattcgccgcaggagtctgaggacgagagccatcaagatgctggtc
ctggacgaagccgacgagatgctcaacaaagggtttaaggagcagatctacgacgtgtac
cgttacctgcctccggccacacaggtggttctgatcagcgccacgctgccgcacgagatc
ctggagatgaccaacaagttcatgacagacccgatccgcatcctggtcaaacgtgacgag
ctgaccctggagggcatcaagcagttcttcgtggcggtggagagggaggagtggaagttt
gacactctgtgcgatctgtacgacacgctgaccatcactcaggccgtcatcttctgcaac
accaagaggaaggtggactggctgacggagaagatgagggaggccaacttcacggtgtcg
tcgatgcacggagacatgcctcagaaagagagggagtccatcatgaaggagttcagatca
ggagccagccgggtcctgatctccaccgacgtctgggctcgaggtttggacgtccctcag
gtgtctctgatcatcaactacgacctgccgaacaacagagagctctacatccacaggatt
ggccgatccggtcgttatggccgtaagggcgtggccatcaactttgtgaagaacgacgac
atcaggatcctgcgggacatcgagcagtactactccacccagatcgacgagatgcccatg
aacgtggccgacctgatctga
DBGET
integrated database retrieval system
