Micropterus salmoides (largemouth bass): 119899949
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Entry
119899949 CDS
T07309
Name
(RefSeq) peroxisome assembly factor 2-like isoform X1
KO
K13339
peroxin-6
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
119899949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119899949
Membrane trafficking [BR:
msam04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
119899949
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_lid_3
AAA_33
PEX6_4th
RuvB_N
TIP49
AAA_5
AAA_22
DUF815
RNA_helicase
AAA_7
NPHP3_N
TsaE
Mg_chelatase
nSTAND3
Parvo_NS1
AAA_28
AAA_17
IstB_IS21
AAA_24
AAA_25
PhoH
Glyco_hydro_19
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
119899949
NCBI-ProteinID:
XP_038570701
LinkDB
All DBs
Position
Unknown
AA seq
940 aa
AA seq
DB search
MAVQVQLCSLESFPSHLSPLDVLMLKSHLDSVFRNDTDPPTVLFTPQRPPRPGSPPGILL
RVHPTTEEETAGCGGAESGSRVRLFASRLFTRHHGLQRLGSTGTVRALEPVSLDRVVLGA
RSRQSLRRAGAERFTGGLLELCRPGQWLLARRGEPLLLGDEPGQLTELLVLDCSPVTQGR
ITADTSLVLTDCWDSVDPPGATPPCRPLRLCVSDFAHYADGLGGGRSLLDSRKLLGSGFS
GVLQALECRLDVRVADARRWLGVGGQRGAAVDADSCVFVSKQLLLRLGLFHQEWVRLSRP
GGSSRPPADQTEVRGAPVCRERLVSVLAVDLSQSPDLNQNGEVGFISGTLWFNMTEGEEV
PVNSCTLRMKRWRPSPPVPGARRSDSFCRSASPPFASELHIQPVVSPLYNNLSCYDNLLS
EHFRTPRLVSQGDILTVPAENHPDLLENNSEGIFRCPVLFFRVQTVCPSAEREEEEGGGG
AYLADRQHTSLYMRASTNSPVPCCSVDGASLWSSLSPPGLQKTVDLLGSIILPHLHRSVL
CGCSSSLSGCTVLLHGPAGSGKMTAVGAASRRLNLHLLKVDCVSVCADTPAASEVKLTSV
FQRADALQPCILLLRNLQLLLRPRGGAEEDGRVPAAFCQLLHSAPTSVVVVATVSRPRDL
SAGVMASFVHQVALESPTEEQRHSMLVSLSRDLHLGRDVDLERLSKLTAGFVLGDLSALL
VAAGRAACRRLILTCGGRQEEDLCSSGVTILNQDLTSALKTLQDAQSTAIGAPKIPDVRW
EDVGGLQQVKKEILDTVQLPLQRPELLSLGLNRTGVLLYGPPGTGKTLLAKAVATECSMT
FLSVKGPELINMYVGQSEENIREGLYCARFEFYFVHFCSSFLSVVIMQSEKLCFCFNLEV
RVVLRNTAQSTSMKQAFFFAADRLRLLLQTYENIPPKRLF
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcaggtgcagctgtgtagtctggagagtttcccgtcgcacctgagtcctctg
gatgttttgatgttaaagtctcacctggactcggttttccggaacgacaccgaccctccc
accgtcctcttcaccccgcagcggcctccgcgtcccgggagcccgccgggcattttactg
cgcgttcacccgaccaccgaggaggagaccgcgggctgcggaggagccgagtccgggagc
cgcgtccggctgttcgccagccgcctcttcacgcggcaccacgggctccagcggctcggc
agcacggggaccgtccgggctctggagcccgtcagcctggacagagtggtgctgggagcc
cgcagcaggcagagcctccgccgggccggagcggagcggttcaccggcgggctgctggag
ctctgccgcccgggacagtggctgctggcccggcggggagagccgctgctgctgggagac
gagccgggacagctgacggagctgctggtgttggactgcagtcctgtgacgcagggtcgg
atcacggccgacacgtctctggttctgacagactgctgggactcggtggaccccccgggc
gccaccccgccctgcagaccgctcagactgtgcgtgtcggacttcgctcattacgccgac
ggcctcggaggggggcggtctctgctggacagccggaagctgctgggctcggggttctcg
ggggtcctgcaggcgctggagtgcaggctggacgtccgggtggcggacgctcggcggtgg
ctcggggtcggaggtcagcggggcgcggccgtggacgcggacagctgtgtgtttgtgagc
aagcagctgctgctcaggctggggctgtttcaccaggagtgggtgaggctgtccaggccg
ggcgggtcctccagacctcctgctgaccagaccgaggtcaggggggcccccgtgtgcaga
gagcgactggtctctgtgctggcggtggatttatcacagagtccagacctgaaccagaac
ggagaagttggtttcatatcgggaacgttgtggttcaacatgactgaaggagaagaggtt
cccgtgaacagctgcacactgaggatgaagaggtggaggccgtcacctccggtgcccggc
gcccgccgctctgacagtttctgccgctcagcttctccgccgttcgccagcgagcttcac
atccagccggtcgtctctccgctgtacaacaacctcagctgctacgacaacctgctgtct
gaacacttcaggacgcccagactggtctctcagggcgacatcctgacagttccagccgaa
aaccacccggacctgctggagaacaattcagagggaatattcaggtgtccagtgctgttc
ttcagagtgcagacagtatgtccgtctgcagaaagagaagaagaagaaggaggaggagga
gcttacctagccgacagacagcacacctcactctacatgcgagcgtccaccaacagcccc
gtcccctgctgctctgtggacggagcgtctctgtggagcagtctgtctcctccgggcctc
caaaagaccgtcgacctcctcggcagcatcatcctgccgcacctgcaccgcagtgttttg
tgtggttgcagcagctccctgtcaggctgcaccgtcctgcttcacggtcctgcaggaagc
ggtaagatgacggcggtcggcgcggcgagtcgcagactgaacctccacctgctgaaggtg
gactgcgtgagcgtgtgcgctgacactcctgcagcctcggaggtgaagctgacctcggtg
tttcagcgggccgacgccctgcagccctgcatcctgctgctcaggaacctgcagctcctg
ctcagacctcgtggtggcgccgaggaggacggcagggtcccggctgcgttctgccagctg
ctccacagcgcccccaccagtgtggtggtggtggcgacggtcagcagacctcgggatctg
tctgcaggtgtcatggcgtcgtttgtccaccaggtggcgttagagagtcccactgaggag
cagcggcactcgatgctggtcagcctgagccgagaccttcacctggggagagacgtcgac
ctggagagactgtccaaactcactgcgggttttgtgttgggggatctgagcgctctgctg
gtggcggcaggtcgagccgcctgcaggaggctgattctcacctgtggaggccggcaggag
gaggatctgtgctccagtggagtgaccatcctgaaccaggacttgacctccgccctgaag
accctgcaggacgcccagtccacggccatcggagcccccaagatccctgatgtgcgttgg
gaggacgttggaggtctgcagcaggtgaagaaagagatcctggacactgttcagcttcct
ctgcagcgtccagagctcctgtctctgggtctgaaccggaccggagtcctgctttacgga
ccaccagggacggggaaaactctgctggccaaagccgtggctactgagtgctccatgacc
ttcctcagtgttaaaggtccggagctcatcaacatgtacgtgggtcagagtgaagagaac
atcagagaaggtttgtattgtgctagatttgagttttattttgtacacttttgttcatct
tttctatcagtagtaataatgcaaagtgaaaaactttgtttttgtttcaacctggaagtc
agggtagtattgcgaaacacggctcagagtacgtccatgaaacaagcttttttttttgcg
gcggacaggctcagattgttgttacaaacttatgaaaatatccctccaaagagacttttt
taa
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