Micropterus salmoides (largemouth bass): 119900092
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Entry
119900092 CDS
T07309
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase rpap2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msam01009
]
119900092
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msam03021
]
119900092
Enzymes [BR:
msam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
119900092
Protein phosphatases and associated proteins [BR:
msam01009
]
HAD phosphatases
Fcp/Scp phosphatases
119900092
Transcription machinery [BR:
msam03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
119900092
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
119900092
NCBI-ProteinID:
XP_038570780
LinkDB
All DBs
Position
Unknown
AA seq
675 aa
AA seq
DB search
MRENRNSMETEERSGSGPPAETSKKGGKRVKALAAKEAARRREVVRETLWQKLDLEKRAL
KVVERLQEDSVAEDFLIDCVKFITPANYKDAIEERFISKLCGYPICSNKLGKIPTQRYKI
STKTNKVYDITERKCFCSNFCYKASKEFELQIPNTPLWLRQHESPPEIRLMKKGDGGSSG
EEVKLLERRLQEEDIDDPLSAQSEDPPSSLQHSAAADLSHSESSDIEQEQDFVSSVVSQH
QGPKVHWGELPKRRDEDKNGERGKTERQKKQTREGDEEEIECHQGGDPEREGKMREDKNR
QESLSSQREAGTDSKKPQQLLLLNKDKPCAEQGPEQKGLPQELSVEEAAAKLNLCSLSGT
RTAPLPVDSTATQADLLTSPVCKDSNPSTESKPLPSSTPINAEWDDHKTALTSQPGLNIT
QVGMSKRGAAGLRDLLKNHTAGAEPESVRLNLLECLRRTLKDWSTDETLKFLYGAKHSLG
SPFADVKEDKEAEEEEELDEDDLEDEVTDEDAKGDDAAVQKRPSAATPDYKTLQEENRQL
ELRVREFYKGTWILPEGVEEPDGNKVKDQSLKDPVLPLLDSHAQHVIRKRITVEKLTSCL
RIIVGSLGLTMSDVSTDLNNLVRTFRLVQHTQIHTTLCRSACKTLHTHTHTHTLIIFSSH
HFSMLTRHVSQKIVF
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaaacagaaacagcatggagacggaggagaggagtgggagcggacctcccgct
gaaacctcaaaaaaaggtgggaaacgcgtgaaagcactggccgctaaagaagcagcaaga
aggcgagaggtggttagggagacgttatggcagaagttggacttggagaagagagccctg
aaggtagtggagcgtcttcaggaggacagtgtggccgaggacttcctgattgattgtgtg
aagttcattactcctgcaaattacaaagacgctatagaggagagattcatttctaagctg
tgtggttatcccatatgttcaaataaactgggcaagatcccaactcaacggtataaaatt
tctactaagaccaataaggtgtatgacattacagagcgcaagtgtttttgtagtaacttc
tgttacaaagcctccaaagagtttgagttacaaataccgaacacacctctttggctcagg
cagcatgaaagtcctccagaaattagattgatgaagaaaggagatggcgggagttctggt
gaggaggtgaagctgttggagaggcgtcttcaagaggaggatatcgacgacccgctctct
gctcaatctgaggaccctcccagctctctgcagcattccgcagcagcagacctaagccac
agtgaaagcagtgacattgaacaggagcaggacttcgtctccagcgtggtttcccagcat
cagggacccaaggtgcactggggcgaactgcctaaacgtagagatgaagacaagaatggt
gaacgagggaagacagagaggcaaaagaaacagacaagagagggagatgaagaggagatt
gagtgtcatcaaggaggggacccagaaagggagggaaaaatgagagaagacaagaataga
caagagtcactttcaagtcaaagagaagctggaactgactctaaaaaaccccaacagctg
ctcttattaaacaaagacaaaccatgtgcagagcaggggccagagcagaaaggcttgcct
caggaactcagtgtggaagaggctgcagctaagctgaatttgtgcagtttatctggcact
cgcactgctcccctgcctgttgactcaacagccacacaagcagatctactcacctctcca
gtgtgtaaagactcaaacccctcaacagaaagcaaacctctcccttcttcaactccgatc
aacgcggaatgggacgaccacaaaaccgcattgaccagccagccaggtctcaacatcacc
caggtgggaatgagcaagagaggggcagcagggctacgagatctgctcaagaaccacacc
gctggagccgaacctgaatctgtccgcctgaatctcctcgagtgcctgagaagaacgtta
aaggactggagcactgacgagaccctgaagttcctgtacggcgctaagcattcactaggc
tctccttttgctgacgttaaagaagacaaagaagctgaagaagaggaggagctggatgaa
gatgaccttgaggatgaggtgaccgatgaggatgcaaagggggatgatgctgcggtgcag
aagagaccgtctgccgcaactccagactataagactcttcaggaggagaaccggcagctg
gagctaagagtcagggagttttataaggggacctggatcctgcctgagggggtggaggag
ccagatggaaacaaggtgaaggaccagagcctgaaggacccggttctgccactccttgac
tctcatgctcagcacgtcatccggaaacgaatcacagtggagaagctcaccagctgcctc
agaatcatcgtcggttctctgggtctcaccatgagtgacgtctccactgacctgaataac
ctggtcaggactttcaggttagtgcagcacacacaaatacacactactctctgcagatct
gcttgcaaaacgttacacacacacacacacacacacacactcatcattttctcatctcat
cattttagcatgcttacacggcatgtgtcacaaaaaattgttttttaa
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