Micropterus salmoides (largemouth bass): 119900172
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Entry
119900172 CDS
T07309
Name
(RefSeq) LOW QUALITY PROTEIN: neural cell adhesion molecule L1.1-like
KO
K06550
L1 cell adhesion molecule
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04514
Cell adhesion molecule (CAM) interaction
msam04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
119900172
04517 IgSF CAM signaling
119900172
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
msam04515
]
119900172
04090 CD molecules [BR:
msam04090
]
119900172
04091 Lectins [BR:
msam04091
]
119900172
Cell adhesion molecules [BR:
msam04515
]
Immunoglobulin superfamily
L1 family
119900172
CD molecules [BR:
msam04090
]
Proteins
119900172
Lectins [BR:
msam04091
]
I-type lectins (Siglecs)
119900172
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
fn3
ig
Bravo_FIGEY
V-set
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_5
C2-set_3
C2-set_2
Tissue_fac
Sp38
Ig_PDGFR_d4
Motif
Other DBs
NCBI-GeneID:
119900172
NCBI-ProteinID:
XP_038570861
LinkDB
All DBs
Position
Unknown
AA seq
1225 aa
AA seq
DB search
MPISSTAFSREDINLPCEATGNPRPIFRWVKDGEPFGVERKESGTLRAEDDEPLETYEGY
YRCYASNILGTAMTQTIQVIVEPQPVLLKQQKIHKRASEGDSIILSCNPPESSTPPLIHW
MDKRMVHIKQSDRVMVGLDGNLYFSNLLVTDSRDDYICHAQYTAARTILPETAVRLIVTP
SNDVVRGRKPHFFRPTDIHTSVLALRGQSLTLECIPKGLPTPKVEWKKKDSALGETSGRL
ESHNRMLHFESIALEDDGEYECTALNSHGSATRSFTVTVEAAPYWLKQPQNLLYSPGETV
RLDCQAEGIPKPNITWSINGEPVAEVDDDPRRSVSGGVLILKDVEYADTAVYQCEATNKH
GSILLNTYLHVVELPPQILSSDGVVYRVTEGKDIKLHCESFGSPRPHVTWEGENRIPLLS
DPRVSLLTNGTLELSNAGHDDSGEYTCSVKHSNISITAHLEVFNRTVILTSPQDVRTLRG
TSALLDCHFLIDPQLPNPQVVWKKNGQKLQASSPDDKYTVHDNGTLKVTDIQADDNGSYS
CEVITDLDNIEASGSITVVAPPDPPKGLTLSDVEDHSLTLSWIPGHSHNSPITEFIVEAR
KSSTQSKRWQWEEWKRVPGAFNHLELTLHPYCTYRFRVIAVNELGRSDPSEPSEHHSTPP
AVPDRNPTGVRSESIDPKTLIIAWDEMDKRFHNGQGFLYKVSWREAGGAAXHWENVDVQS
PPVVINNTGTYTPFEIKVRAVNSLGDGPEPEPEIGYSGEDEPEEAPTGVTTTVMNSTVRV
KWNEAQNVRGLLLGYKLYIKRLGPQVQRERRSLGKQHQGKEKEGRFEQGQEGHRVVLVPS
MKTSEEVTGLQLYSRYELSVTAYNSKGEGPHSPPHHFSTPEGAPGPPASLTFESPSEKSL
ILYWTPPVETNGMLREYMVQYQREVETRDHLLQIESINDPSVTQIELDNLDPSSYYIFKV
IARTSAGDGPAITRRGATQLEGVPPSNISIVSGNTLLNLSWVPGERRRNHAFHIRYLRKS
AGGQWEESEVVNSTQGFYSLTGLQPGTQYHLVIMHGNDTQWEDEHWTIGPAPTEMPNRFP
AQGWLIGLISAILLLVLILLILCLIKRSKGGKYAVKDKEDXEMDSEARPMKDEEYRSLES
DPDEKRSDSQPSLCPESKLGSDDSLAEYGDSVDIQFNEDGSFIGQYSGRGPVPHGNESSG
PASPVNAVPPPPXAPSMSSILNRPT
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgccgatatcctccacagccttttctcgagaggacatcaatctgccctgtgaggccact
ggtaacccgagacccattttccgctgggtgaaggacggggagccgttcggggtggagcgt
aaagaatccgggacgttgcgagccgaagacgatgagcccctcgaaacgtatgaaggctac
taccgctgctacgcctccaacatcctggggaccgccatgacacaaaccatacaggtcata
gtggagcctcaaccagttcttctaaaacaacaaaaaatacataaaagagcttcagaggga
gacagcatcatcctgtcctgcaaccctccagaaagctcgactcctccactcatccactgg
atggacaagaggatggtgcacatcaagcagagtgacagagtgatggtcggcctggatggg
aacttgtacttttctaatcttctagtgactgacagcagagacgactacatctgccatgcc
cagtacacagcagccaggactattctccctgagactgcggtcagactcattgtcacgccc
agtaatgatgtcgttcgtggtagaaaaccccacttcttccgtcccactgacatccacacc
tctgtgctggccctcaggggacaaagcctcaccctggaatgcatccccaagggcctaccc
actccaaaggtagaatggaaaaagaaggacagtgcgctgggtgaaacaagtggcagactg
gagagccacaaccgcatgcttcacttcgaaagcatcgccctggaagatgacggagagtac
gagtgtacagccctgaacagccacgggtccgccacacgctccttcactgtcactgtggaa
gcggctccctactggctgaagcagcctcagaacctgctgtactctcccggggaaactgtg
cgactggactgtcaggctgaagggatcccgaagcccaacatcacctggagcatcaatggg
gagccagtcgcagaggtggacgacgatccccgtcggagtgtatcgggtggtgtgttgata
ctgaaggacgtcgagtacgctgacaccgctgtgtatcagtgtgaggccaccaacaaacac
ggctccatcctcctcaacacctacctccatgtcgttgagcttcctcctcagatcctgtcc
tctgatggagtggtgtacagagtcactgagggcaaagacatcaagctgcactgtgaatcc
ttcggctcgccacgaccacatgtcacatgggagggtgagaacaggattcctctgctgtcg
gaccctcgtgtctccctgctgaccaacgggacgctcgagctgtccaatgctggtcatgat
gacagcggagagtacacctgctctgtcaaacactccaacatctccatcactgctcacctg
gaagtcttcaatcgaacagtgatactgacgagcccccaggacgtgcggacgctcagagga
accagcgctctgctggactgtcacttcctcatagaccctcagctgcctaatccccaggtc
gtctggaagaaaaatggacagaaactgcaggcatcgtcaccagatgacaagtacactgtc
catgacaatggcaccttgaaagtgactgacatccaagcagacgacaatggttcttattcc
tgtgaagtcatcaccgacctggacaacatagaggccagtggctccatcactgtagtcgca
cccccggacccccccaaaggtctgactttatctgatgttgaagaccacagcctcactctc
agctggatcccaggacactcacacaacagccccatcacagagttcatcgtggaggcccgg
aagagcagcacacagagcaaaagatggcagtgggaggagtggaagagagtgcccggggcc
ttcaaccatttggagctgaccctccacccatactgcacctaccgcttccgggtcatcgcc
gtcaacgaactcggccgcagtgaccccagtgagccctcagaacaccacagcacgccacca
gctgttcctgaccgtaaccccactggtgtgcgcagtgagtccatagacccaaagactctg
atcattgcatgggatgagatggacaagcggttccataacggccagggcttcctgtacaag
gtgtcatggcgggaggctggaggagcagcantacactgggaaaatgttgatgtacagtct
ccgccggtcgttataaacaacacaggaacgtacacgccgtttgaaatcaaagtccgggct
gtcaactcactcggagacgggccggaaccagagcctgagatcggatactccggagaggat
gagcctgaggaagctcctactggagttacaacaaccgtgatgaacagcacagtcagagtc
aagtggaacgaagcccagaatgtccgaggtctgctgctgggatacaagctctacatcaag
aggttgggtccccaggtgcagagggagcggaggtctcttggaaaacagcatcaggggaag
gagaaagaggggagatttgagcaagggcaggagggacacagggtggtgctggtacccagc
atgaagacctcagaggaggtaacagggctgcagctgtactctcgctatgagctgtctgtc
actgcctataacagcaaaggggagggccctcactccccccctcaccacttcagcacccca
gaaggagctcctggtcctcctgcgtcgttgacgtttgagagcccatcagagaaatcgctg
attctctactggacccctccagttgaaaccaatggcatgctgcgggaatacatggtgcag
tatcaacgagaagtggagaccagagaccacctgttgcagatagagagtatcaatgatccc
agtgtgactcaaattgagttggacaatctggaccccagcagctattacatcttcaaagtc
atagcacgcaccagcgctggagatggacccgccatcacacggaggggcgccacccagctt
gaaggagttcctccatccaacatctccatagtttccggtaacacattactcaacctgagc
tgggtgcccggagagcgacgcaggaaccacgccttccacatccgctacctcaggaaaagt
gccggtggtcagtgggaggagtcagaagtggtgaactccacgcagggtttctattcactg
acaggcctccaaccaggaactcagtaccaccttgtgatcatgcacggaaacgacactcag
tgggaagatgagcattggaccataggaccagcgccgacggaaatgcccaataggttcccc
gcccaaggttggttgataggactcatcagcgccattttactactggtgctgatactgctc
atcctctgccttatcaaacgcagcaaaggcggcaaatacgcagtgaaggacaaagaagac
naagagatggactcagaagctcgtccgatgaaagatgaggagtacagatccctggagagt
gatccagatgagaagcgctcagacagccagccgtccctgtgcccggaaagtaagctgggc
agtgacgactctctggctgaatacggggacagcgtggacatccagttcaacgaggacggc
tctttcatcggccagtacagcggccgggggcccgttccccacggcaacgagagctctggt
cccgcctcccccgttaacgcagtcccgccccccccantcgctccatccatgtcgagcatc
ctgaaccggcccacctag
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integrated database retrieval system
