Micropterus salmoides (largemouth bass): 119900241
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Entry
119900241 CDS
T07309
Symbol
nhej1
Name
(RefSeq) non-homologous end-joining factor 1
KO
K10980
non-homologous end-joining factor 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
119900241 (nhej1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msam03400
]
119900241 (nhej1)
DNA repair and recombination proteins [BR:
msam03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
119900241 (nhej1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XLF
XLF_CC
XRCC4
Motif
Other DBs
NCBI-GeneID:
119900241
NCBI-ProteinID:
XP_038570964
LinkDB
All DBs
Position
Unknown
AA seq
315 aa
AA seq
DB search
MMEASGAPTEVLLQRPWLPVSISCCQLLAKSWFGETAYHVLLTDMHCVWEERMDSAGIQK
RAQELNRRLRAPVKAFFSHLCEVVQPCLTGSDGRPDGQVLVSLTRQEDGNISMKLKSELA
GLPFYWEFHCTPAPITVVCVQLVRPLLAMSHLLQRQVEQLAGLLARKDAEIQDYRENGAT
LSRARLQTDVFVEQAFREDFMSKTLPLLRSEQQDALGFNADLQQLYAAIVAHGNAGTRKR
KLSEERPVEEDQPPTEEPDLTSSLGGSVSSEAGEDRADAAGAKMADRPKQSLPVTSEPAE
RTSNKPKKKKVGLFR
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggccagcggagccccgactgaggtcctcctgcaacgtccatggcttcctgtg
agcatcagctgctgccagctgctagccaagagctggtttggggaaacggcgtaccacgtc
ctgctgactgacatgcactgtgtgtgggaggagaggatggactcagcaggcatccagaag
agagcgcaggagctgaacaggcgtttgcgagccccggtcaaagccttcttctcccacctg
tgtgaggtggttcagccctgtctaacaggaagtgacgggcgacccgacggtcaggtgctg
gtgtccctgacgcgacaggaggatggcaacatcagcatgaagctgaagagcgagctggca
gggctgcccttctactgggagtttcactgcaccccagcccccatcactgtggtgtgtgtt
cagctggtgcgccccctgctggcgatgagtcatctgctgcagcggcaggtggagcagctc
gcaggtctgctggcgaggaaggacgcagagatccaggactacagagagaacggagccacg
ctcagcagagcgcggctgcagacggacgtttttgtggagcaagccttcagagaggacttc
atgtcaaagactcttcctctgctgcgctctgaacagcaggacgcattgggcttcaatgcc
gacctccagcagctgtacgcggccatcgtcgcccacggcaacgcaggcacaaggaaacgc
aaactgtccgaggagcgccctgtcgaggaggaccagccgcccactgaagaaccagacctc
acctcgtctctcggtggatctgtcagcagtgaagcaggtgaggacagagcggacgcagcc
ggagccaagatggccgacagacccaaacagtctctaccggtcacgtccgaacctgctgag
cgaacgtccaacaaaccaaagaagaagaaagtcggactgttcagatga
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