Micropterus salmoides (largemouth bass): 119900377
Help
Entry
119900377 CDS
T07309
Symbol
syde2
Name
(RefSeq) rho GTPase-activating protein SYDE2 isoform X1
KO
K20655
Rho GTPase-activating protein SYDE
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119900377 (syde2)
Membrane trafficking [BR:
msam04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
119900377 (syde2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGAP
Spt46
Motif
Other DBs
NCBI-GeneID:
119900377
NCBI-ProteinID:
XP_038571182
LinkDB
All DBs
Position
Unknown
AA seq
1728 aa
AA seq
DB search
MADPLRRTLLAKFRGKKSKKTSTVGGGYGSAAAVNGGREGKEKVLQTQRDSDEARPVVLF
TGLDCTTERMSTYENCVDSPECPGEMVQTAGVVKARESRATELAGARPQERSSGGRVRVN
EELLGVSLQRGVQSGGLAVVGGDRTNKVHRSVGKITLSAAVTLAGPHVHRKHFVSVPRQC
SVGDSIGFGDSSNHVSHRARVEPHTGVGKPPQDRVTTPDSDETEPRDRGHSRHMAGTVEA
VNEHNANWRFDNNHSLERSSPVRAAPVYPNGTSRTTEENILIRNVESYGPEYAGDIRGTA
GGLQSPTFFPTELEICDINMASLCATEGSLRYDLDSEDEDYYDNEILPFYETIRAKNDGD
RAEVAELPLSGQDKGQLDDSSSAQETDRLRNQLKEAYYLLINAMNDINLDAQQISGGLTE
QQATSSCSSSQSRDSLCSRLSAKNMDSDSWSSGGDHSPQQVSDTDSLLLCLSGNLESGLK
GRLNSKSMVNLSFTKIRPTLLRSASDGAIRYQGGPLLSVQDPGDNGATETNEAEGGKVTG
VGELSEPGVLYDAISSDELLQDAGGDEDRGGQLNESSGSVNSLTGSTDSNADASTHQGLD
NKQELTEARALGNNSVNKGHGVTVNKMQEWMHKGRLLSSEMKQRIEGSSLHRGQGQNQDR
SCPQANLGGCKPGVQTSSRGVKSVKVTKSPTIKSPCQQQPAFIENVQTPCANGREVGRAN
ESWRPPLTTITVSKKRNWLQQSSLGKNHCSKDELQGMLGAEEDGSQGSHQPPPPPSPSPD
HLRPSGGAPSRPVRLHLPQVIVGQAKVSPHPRSMDPAEENDADDEGEIWYNPIPEDEEQE
MSRQPSIRLLVPTRAEAHRRPSRGGDEGHGGRNLGDGSRAGPEALGESLGGGGGSDDGSQ
GNAVHSTEALHLHRQMLACKPQEEGGPSTSKATDGPDLPNAVGSPPSSPNPAKKSSSINW
SFPDKIKSPRTVRKISMKMKKLPELSRKLSVKGTPSGCNSNNGNGSGQLEPRALSPRNNG
SGSEAVPNSSGPTRLAASGGGQASRNVISRYHLDSSVSTQHSFSKKKSNNSSKSASKGGY
LSDGDSPELVAKSGKHGSAEGKGGKGKEMEGGGGSSKLNGTELDIDAFRHYSFTEQPKCS
QYISGLMSLHFYGAEDLKPPRVDSRDVYCAIQVDSVNKARTALLTCRTTFLDMDHTFNIE
LENAQHLKLVVFSWEPTPRRNRVCCHGTVVLPALFRVTRCHQLAVKLEPRGLIYVKLTLM
EQWQNSLDGGPDGDREPQVFGVEAWRVVEREGTGLMVPLLISKCINEIEKRGCQVVGLYR
LCGSAAVKKELREAFERDSYAVELCENTYPDVNVITGVLKDYLRELPYPLITKNLYEAVL
ETMVTRPLRMGAAGCENEQADSEYTVSLLDNLPEVERMTLRRLLDHLKLVASYQEVNKMT
CQNLAVCFGPVLLSQRQDASCHTNRVFIDSEELASALHFKKHIEVLHYLLQLWPVVDPYG
QSSSQPPAASLAPASSDLLSVPPLRRRKERPQVLNLTEAEMAGVLRPKPGRLDSPSNRYA
GDWSGCGESYFPCEILLPPSKEEADYDDVPSEDTEAAEEGQEKPEYAEEDEGHKVTSPAS
DPAEPEQPHREVVVKEEEKEQEKEENQVESDSSGSGQPLEDREEKRVCDHILPPRLPKEH
TYQAYMKIQDISPVLSNRVNLRDLQESIDTLIGNLERELNKNKLNVGY
NT seq
5187 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcctctgcggaggactttactagcgaaattccgggggaagaaatccaagaaa
acatcgacggtcggcggtggatacggctctgctgctgcggtgaatgggggccgagaaggt
aaagaaaaagttttgcaaacacagcgagactccgacgaggctcgcccggtagtgctgttc
acggggctggattgcactacagagagaatgagtacgtacgagaattgtgttgattctccc
gagtgcccgggagagatggtgcaaactgcgggggttgtaaaagctcgggagagtcgcgca
acagagttggccggcgcacgtccccaggagcggagcagcgggggcagggttcgggttaat
gaggagctcctgggggtctcacttcaaagaggagtgcagtctgggggactcgcggtagtt
gggggagataggaccaacaaggtgcacagatccgttggcaaaattactttatcagcggcg
gtcactcttgcaggaccgcatgtccacagaaaacacttcgtctccgtcccgcggcagtgc
agcgttggggattcaatagggtttggggacagttcaaatcatgtttcgcaccgagcacgt
gtagaaccgcataccggggtcggtaaaccaccacaggaccgggttactactcctgatagt
gatgagacagagcccagggacagaggacactcccggcacatggcagggactgtagaggct
gtcaatgaacataacgccaactggaggtttgacaacaaccacagtttggagaggagctcg
ccagttcgcgcggcacctgtgtatccaaacggtacgtcaagaaccacggaagaaaacatt
ttaatcagaaatgttgagagttatgggcctgagtatgcaggggacattagagggactgca
ggcggtctgcagagcccgacgtttttccccacagagttagaaatatgcgacattaacatg
gcatccctgtgcgccacagaggggtcacttaggtacgatttagatagtgaggatgaggat
tactatgataatgaaattctgcctttttatgaaactattcgagcaaaaaatgatggtgat
agagcagaggttgcagagctgccactgtctgggcaggataaaggacagctggatgacagt
agcagtgcccaggaaacagacaggcttaggaaccagctgaaagaagcttattaccttctt
atcaatgctatgaatgatatcaacctggatgcccaacagattagtggcggtttaactgag
cagcaggccacctcctcctgtagtagtagccagtccagggatagcctgtgctcaaggttg
tctgccaaaaacatggacagtgactcctggtcctctggaggggaccacagccctcagcag
gtgtctgacactgactcactcctgctttgcctcagtgggaaccttgagtcaggcctcaaa
ggcaggctgaatagtaagagtatggtgaacctgtcctttactaagataagacccacatta
ctgcgctctgccagtgacggagctatcaggtatcaaggtggacccttactctctgttcag
gaccctggtgataacggggctacagagacaaatgaggctgaagggggtaaagtcacagga
gtgggtgagctgtcagaacctggggtgctttatgatgccatcagcagtgatgagctgcta
caggatgctggtggtgatgaagaccgtggcgggcagctcaatgagagcagcggctcggtc
aacagcctgacaggttctacagacagcaacgccgatgcatcgacacatcagggtcttgac
aacaagcaagagctgactgaagcccgagcactgggcaacaactctgtcaacaaggggcat
ggtgtcactgtcaacaagatgcaggagtggatgcacaaggggcgtttgttgtcttcagag
atgaagcagcgcattgagggctcatctttgcaccgtggtcaaggccaaaaccaggaccgg
tcctgtcctcaggctaaccttggtgggtgtaaaccaggggtccagacctctagccggggg
gttaaatctgtcaaggtcaccaagtcacctacaatcaagtcaccatgtcagcagcagcca
gctttcattgagaatgtccaaaccccctgtgctaatggccgtgaggtgggcagagccaat
gagtcatggcggccaccgctcaccaccatcactgtctccaagaagcgcaactggctgcag
caaagctcccttgggaagaatcactgcagcaaggacgagctgcagggaatgctgggagct
gaggaggatggcagccagggctcccatcagccgccacctcctcccagtccttctccagac
cacctgagaccctcagggggagccccgtcacggccggtccgcctgcacctgccccaggtt
atcgtcggtcaggccaaggtgtctcctcaccctcggagcatggacccagccgaggagaat
gacgctgatgatgaaggagagatctggtacaacccaatccctgaggatgaggaacaggag
atgtctcgacaaccctccattcggctgctggttcccactcgagcagaagcccacaggagg
cccagcaggggaggggatgagggtcatggtggccggaacctgggagacggaagccgtgcc
gggcctgaggcactcggtgaaagcctaggtggcgggggcggttcagacgacgggagtcag
gggaacgctgtacattccacagaggcactacatctgcacagacagatgctcgcgtgcaaa
cctcaggaggagggggggccttccaccagcaaagccacagatggtccagacttgcccaat
gccgttgggtcccctccctccagcccaaacccagccaagaagagcagctccatcaactgg
tccttcccagacaagattaagtccccgcgcactgtgaggaagatctccatgaagatgaag
aagcttccggagcttagccggaaactcagcgtaaaggggaccccgagtggctgtaacagt
aacaacggcaacggaagcggtcagttagagcccagagccctttctccccgaaacaacggg
agtgggtctgaggccgtccccaattcctcaggccctaccagattagctgcatctgggggt
gggcaggcaagccgtaacgtgatctcacgctaccacttggacagcagtgtgtccacacag
cacagcttcagcaagaagaaaagtaacaatagctcgaagtccgctagtaaaggcggttac
ctcagtgatggtgactcacctgagctggtggccaaatctgggaagcacggctctgcagag
gggaagggagggaaaggcaaggagatggaaggaggaggtggaagctccaaacttaatggc
acagagctggacattgatgcttttcgccattacagcttcacagaacagcccaaatgcagc
cagtacatctccggactgatgagcctgcacttttatggtgctgaggacctcaaacctcca
cgcgttgactcgcgagatgtctattgcgccatccaagttgactcagttaataaagcacga
accgctctcctcacatgtcgaactaccttcctagatatggaccacaccttcaacattgag
ttggagaacgcccagcacctgaagctggtggtgttcagctgggaacccacaccgagacgc
aaccgtgtctgctgccatggaacagtggttttgcctgcactctttcgggtgacgcgttgc
caccagctggcagtgaagctggagccgagggggctgatctacgtcaagctgaccctgatg
gagcagtggcagaactcactggatggtgggccggatggagaccgggagccccaggtgttt
ggtgtggaggcgtggcgggtagtggagagggagggcacgggactgatggtaccgctactt
ataagcaagtgcatcaatgagattgaaaagagaggctgccaggttgtgggtctctaccgc
ctgtgtggatctgcagccgtcaagaaggagctacgtgaggcgtttgagagagacagctac
gccgtggagctgtgtgaaaacacgtatcctgacgttaacgtcatcacaggagtactgaag
gactacctgcgagagctgccctaccctctgatcactaagaacctgtatgaggcagtgttg
gagactatggtcacgaggcctctgcgaatgggagcagcgggctgcgagaatgaacaggct
gactcggagtacactgtcagcctactggacaacctgccagaggtggagaggatgacactg
cggcggcttcttgaccaccttaagttggtagcgtcctaccaggaagtgaacaagatgacg
tgtcagaacctggcagtatgtttcggcccggtgctgctcagccagcgtcaggatgcgtcc
tgccacacgaaccgagtctttattgactcagaggagttggctagcgcactgcacttcaaa
aaacacatcgaagtcctgcactacctgctgcagctctggccagttgtggacccatatggc
cagtcctcttcccagccccctgcagcttctttggctccggcctcatctgacctgctgtca
gttcctccattacggcgaagaaaagagcggccccaggtcctgaaccttactgaagcggaa
atggcgggtgttctgcggcccaaaccggggcgcctggacagtcccagcaaccgctacgcc
ggtgactggagcggctgtggcgagagctacttcccttgcgaaattctgctgcctcccagc
aaagaggaggcagactatgatgacgttccctctgaggacacagaggcagctgaggagggc
caggagaagcctgagtatgcagaggaagatgaagggcacaaggtcacaagccctgcgtct
gatcctgctgagccggagcaacctcatcgagaggtggtggtgaaggaggaggaaaaggag
caagagaaggaggagaatcaagtagagagtgatagttcaggcagtgggcagccattagag
gacagggaggagaaaagggtgtgcgaccacatccttccccctcgtctgcccaaagagcac
acctaccaggcttacatgaagatccaggatatcagccctgtgttgagcaacagggttaac
ctgagagacctgcaggagagcatcgacactctgataggaaacctggagagagagctcaac
aaaaacaagctcaacgttggatactga
DBGET
integrated database retrieval system
