Micropterus salmoides (largemouth bass): 119900494
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Entry
119900494 CDS
T07309
Symbol
lsm4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03018
RNA degradation
msam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119900494 (lsm4)
09123 Folding, sorting and degradation
03018 RNA degradation
119900494 (lsm4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119900494 (lsm4)
03041 Spliceosome [BR:
msam03041
]
119900494 (lsm4)
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119900494 (lsm4)
mRNA degradation factors
5'-3' decay
Lsm complex
119900494 (lsm4)
Spliceosome [BR:
msam03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
119900494 (lsm4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
119900494
NCBI-ProteinID:
XP_038571426
LinkDB
All DBs
Position
Unknown
AA seq
152 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGPQQNKQQGKGRGGAGRGLFGGRGRGMTG
PGRGQQQQQQQQPQLQQQDKRPGKPQGMKNQH
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccctatctctgctgaagactgctcagaatcatccaatgctggtggagctgaag
aatggagagacatacaacggtcacctggtcagctgtgacaactggatgaacatcaacctg
agagaagtcatctgcacctcgagggatggagataagttctggaggatgcctgagtgctac
atccgaggaagcaccatcaagtatctgcgaatccccgacgagatcattgacatggtgaag
gaggaggtggtgtcgaagggccgtgggcgtggagggccccagcagaacaaacagcagggc
aaaggaagaggaggagctggccgaggcctgtttggcggtcgtggcagaggaatgactggc
cctggtcggggccagcagcaacagcagcagcagcagccgcagttgcagcagcaggataag
agaccgggcaaaccacagggcatgaagaaccagcactga
DBGET
integrated database retrieval system
