Micropterus salmoides (largemouth bass): 119900515
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Entry
119900515 CDS
T07309
Symbol
abca7
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam02010
ABC transporters
msam04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
119900515 (abca7)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119900515 (abca7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msam02000
]
119900515 (abca7)
Transporters [BR:
msam02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
119900515 (abca7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
R1_ABCA1
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
119900515
NCBI-ProteinID:
XP_038571463
LinkDB
All DBs
Position
Unknown
AA seq
2371 aa
AA seq
DB search
MGYFRPLFLLLWKNITYRRRNKIQLIIELLWPLFLFVILISVRHSHPPYKQSQCHFPNKA
LPSAGTLPWIQGIICNINNPCFHSSTPGETRGQVGNFDNSILSRLFVDAQTVLSYSGNRS
FSGFQDLMDSVQRLGERLNLPVEEYLRANETFSTFLLTNSSLSPVTVDQLLKARLNLQVS
VAGAQMQLKDLVCNASMLGQFLKVDGGEAAMNDLQTQLCNQPADILQEAERLFLSQLDFT
KLFTRERLMANAGDLRVISQAVTTVSQELAVLIDDFSSLSSFAEMSAALRLLSPENRSAL
PRESFRAFSRIMCGHPEVGGERIPSLNWYEDNDIKSFLGKNGTEDTNLERDNITTPFCKS
LIQGLESNPLSRIVWRGIKPLFIGKLLYTPDTPAVQQVMKEVNKTFEDLLILQELNEAWM
EVGPQIKNYMESSVEIQLLQDLLRRPEVAVLVNLRLENTSWTASRIARFLSTPSPGVPRK
PGAPPTWLDVYNDLDHTITILAQVTECFSLNKLEGLETEGEMIDRALELLEDRQFWAGVV
FLLPNSSTLDLPPHVIYKIRMDIDDVTRTNKIKDRFWDPGPAADPFNDMRYIWGGFVYIQ
DLVERAVSRILTGVQQTTGIYIQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVAMIIK
GVVYEKEARLKETMRIMGLGTETLWFSWFISSIVPFLVSAALLIALLKWGDILPYSNPSV
VFFFLTAFATATIMQCFLISTFFSKANLAAACGGLIYFGLYLPYVLCVAWRDRLNTTHRV
LASFLSPVAFGFGCEYFSQYEEQGVGIQWYNLRSSPVEGDSYSFTTSIGMLYADAFIYAI
LAWYIEAVFPGEYGIPRPWYFIFQINYWGGIPLEAGMPIPPAPTEQDEDHIEPEPSNLTL
GVSIRDLVKIYKKGAKLAVNHLNLKFYEGQITSFLGHNGAGKTTTISVLTGLFPPTSGTV
YINGLDIRHDMNIIRRTLGVCPQHNVLFDILTVEEHVWFYGCLKGLSEAEVKAELDTLLD
DVGLLHKRHEQTKNLSGGMQRKLSVAIAFVGGSKVVVLDEPTAGVDPYSRRGIWDLLLKY
RKDRTIILSTHYMDEAELLADRIAIISQGKLCCCGSPLFLKSHLGSGYYLTVVKRDGLDT
NTPSSTSICTSTSISTNKLPPFKDSESSMSEDTGLGSEASSSYLAALLSLAQHHIPGARL
VEESRREAVVNLPQMAAKDSSLGVFLSELDQRLTELGISSYGLSDSTLEEIFLQVAEETN
VDAEPEQQAESPHRRQPSAERQHAEEPETEPQETDPLSGDGRGGIPLTGWWLTWQQLRAL
FTKRWLYARRSRRGFFAQIVLPAVFVLVALLFSLIVPPFGKYPALQLQPWMYGEQYTFFS
NDAPGNPAMENLLEALLDLPGFGTKCMDKEEEDNRTSPQCEGARGGLFMRPQVSYSTWQM
FSRGNWSRDGPSPDCRCSTEDVRRMLPDCPQGAGGLPPPQIKRPTGDVLQNLTSYNITDY
LVKTYSQILKKSLKTKKWVNEFRYGGFSLGGRATQTLSQVHHVQDSVVAIRTRYRVPQNS
SLDHLLNRLPEFLRGLSSQNNVKVWYNNKGWHAMVSFVNVMNNGLLRASLPPGPERRKHG
ITAYNHPLNLTKEQLTEMAMMTTSVDVLVSICVIFAMSFVPASFVLFLIEERVSKAKHLQ
FVSGVKPILYWLANFTWDMLNYIVPAAMVVLIFICFQQQSYVSETNLPALVLLLLLYGWS
ITPLMYPASFVFSVPSTAYVVLTSINLFIGINGSIATFVLELFVDEHLNEVNRILKKVFL
IFPHFCLGRGLIDMAKNQAMVDAFQRLGTKQTLDPLQWDFVGKNLFAMAAEGVIFFIFTI
LLQYKFFIRFRPWWVKPEMPPLGPEDEDIARERERVISGKAQSDILTMIDLSKIYKVGRK
PAVDRLCLGIPRGECFGLLGVNGAGKTSTFRMLTGDTSITYGEAFLNHHSVRTEMERVHQ
LMGYCPQFDAISDLLTGREHLELYARLRGVPEESVSKVAQWGVKKLGLTQYAEREAGGYS
GGNKRKLSTAISLIGAPPVIFLDEPTTGMDPKAKRFLWNCILSVTKEGRAVVLTSHSMEE
CEALCTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIILRLVDTKSNPDSCPISAYMKSSFP
SIELKERHQSVLQFQLPSHACCLARVFDVLANNYEELGIIDFSVSQTTLDQVFVNFAKEQ
TDDDDLTDVVIGNMTVPTNLKALASRINPPTIQPQPPVTPPQPSKTPKHHAKSSDGKPKE
GKPKKAKVGKVKSKEGKANGEKSSSTAMTQIPQPEETHQASRRVSSGSNSSNGGVRGESS
KSSGSKHRAESSSKSPSALFMVDSNTQDSAL
NT seq
7116 nt
NT seq
+upstream
nt +downstream
nt
atggggtatttcaggccgctcttcctcctgctctggaagaacatcacatatcgcaggagg
aacaagatccagctcatcatcgagctcctctggccgctcttcctcttcgtcatcctcatc
tctgttcgtcattcacaccctccgtacaagcagagccaatgtcactttccaaacaaagcc
ttgccatcagcaggcaccttgccctggattcagggcattatctgcaacatcaacaacccc
tgcttccacagttcgacaccaggggagacacggggccaagttggcaactttgacaactcc
atactgtctcgtctcttcgtggacgcccagactgttctgtcctatagtggaaaccggagc
ttctctggctttcaggacctgatggacagtgtccaaaggctgggagagagactaaatctc
ccggttgaagaatacctaagagccaatgagacgttctccaccttcctcctgactaatagc
agcctttcgcctgtgactgtggatcagttgctgaaggctcgtctcaatttacaggtttct
gtggctggagctcagatgcagctgaaggacctggtgtgtaatgcaagcatgctggggcag
tttctgaaggtggacggaggagaagcagccatgaatgatcttcaaactcagctgtgtaac
cagccggctgacatcctgcaggaggccgaacgccttttcctctctcagcttgactttacc
aaattattcacgagagaacgtctgatggctaacgctggagacctcagggtcatcagtcag
gctgtcaccacagtttcccaggagctggctgtcctcattgatgatttctcgtctctctcc
agctttgcggagatgagcgcagctcttcgtcttctgtctcccgagaatcgctcggcgctg
cccagagagagttttcgcgctttttcacggatcatgtgcggtcaccctgaggttggtggt
gagcgcatcccatcgctcaactggtatgaagacaatgacatcaagtccttcttaggaaaa
aatggcactgaagacacaaacctggaacgtgacaacatcactactccattttgtaagagt
ttgatccaaggtctggagtccaatcctctgtctcgcattgtgtggcgaggaataaaacct
ctgtttattggaaaactgctgtacacaccagacactcctgcagtgcaacaagtgatgaag
gaggtgaacaagacgttcgaggacctgctgatcctccaggagctgaatgaagcctggatg
gaagtgggaccacaaatcaagaattacatggagagcagtgtggagattcagctgctgcag
gatttgttgaggcggccagaggtcgcagtactggtcaacttgcgtctggagaacacgtcc
tggacggcctcacggattgctcgctttctgtccacaccctccccaggcgtcccaaggaag
ccgggagcgccacctacttggttggacgtctacaacgacctcgaccacaccatcaccatt
cttgcacaagtcactgagtgtttttctctgaacaagttggagggattggagacagagggt
gagatgattgatagggctttggagctactagaggacaggcagttttgggcgggcgtggtt
ttcttgctgcccaactcctccaccctcgacctgccgccccatgtcatttacaaaatccga
atggacattgatgatgtcacccggaccaacaagattaaggacaggttttgggatcctggt
ccagcagccgacccatttaatgacatgcgctacatttggggaggcttcgtgtacatccag
gacctagtggagagagctgtgagccgcatcctgaccggagttcaacaaacaaccggcatc
tacatccagcagatgccctacccctgctatgtggatgatgttttccttcgagtgctgaac
cgctctctgccactcttcatgacactggcgtggatctactcggtggccatgatcatcaaa
ggcgtggtatacgagaaggaggcgaggttgaaagaaaccatgaggattatgggtctggga
acagaaacattgtggttcagctggttcatcagcagcatcgttcctttcctggtttctgca
gcgctccttattgctctgctaaagtggggggacattctgccgtacagcaacccgtctgtt
gtatttttcttcctgacggcgtttgccaccgccaccatcatgcagtgcttcctcatcagc
accttcttctccaaagcaaaccttgctgctgcatgtggggggcttatatactttggcctt
tacctgccctacgtactgtgtgtggcctggagagaccgcctcaacaccacccaccgagtg
ctcgctagtttcctgtcccctgtggcctttggcttcggctgtgagtatttctctcagtat
gaagagcaaggagtgggcatccagtggtacaatctccgttccagccctgtggaaggagat
tcatacagtttcactacctctataggcatgctttatgcggatgccttcatctacgccatc
ttagcctggtacatcgaagcagtctttcctggtgaatatgggatccccaggccctggtac
ttcatcttccagatcaactactggggtggaattcccctggaggcaggcatgcctatcccc
cccgcacctactgaacaggatgaagatcacattgaaccagaaccctctaacctgaccctg
ggtgtgagcatcagagacctggtgaaaatctacaagaagggagccaaactggccgtcaat
cacctcaacctgaagttctatgaagggcagatcacctctttccttggccacaacggagcc
ggaaaaactaccaccatatctgtccttactggcctgttcccacccacctcgggcactgtg
tacatcaatggattggacatccgccatgacatgaatatcatccggagaacgctgggagtt
tgtccacaacacaatgtcctgttcgatatattaacagtggaggagcatgtgtggttttat
gggtgcctgaagggtttgtctgaagcagaggtgaaagctgagttggacactctgttggac
gacgtcggcctgctgcacaaaagacatgaacagactaaaaacctctcaggtggcatgcag
aggaagctgtctgtggccatagcgtttgttggaggctctaaggtggttgttctggatgaa
cctacagctggggttgatccttactcccgcagagggatctgggatctgctgctcaaatat
cgcaaagaccggacgatcatcctgtccacccactacatggacgaggcggagctgctagct
gaccggattgccatcatctctcagggaaagctgtgctgctgtggctcaccgctcttcctg
aaatcccaccttggatctggctactacctcactgtggtgaagcgggacggactggacacc
aatactcccagcagcacgagtatctgcaccagtaccagcatcagcaccaacaagctacct
cctttcaaggacagcgagtcatccatgagtgaagacaccgggctgggaagtgaggcgagc
agctcatacctggcggcgttgctctctctggcacagcaccacatcccaggtgcaaggctg
gtggaggagtcacggcgcgaagcggtggtcaacctgccacagatggctgctaaggacagc
agcctgggcgtcttcctgtctgagctggatcagaggctgactgagctaggcatcagcagc
tacggcctatcagacagcacactggaggagatttttttacaagtggcagaggaaaccaac
gtagatgctgaaccagagcagcaggctgaatctccccacaggcgccagccatcagctgag
agacaacacgctgaagaaccagagacagaacctcaggagacagacccgctgagcggagat
ggccgaggtgggatccccctgaccggctggtggctgacctggcagcagctgagggccctc
ttcaccaaacgctggctttatgctcgaaggagccgcaggggcttcttcgctcagattgtc
ctgcctgctgtgttcgtgcttgtcgctttgctcttcagcctcatcgtgcctccatttggg
aagtatcccgccctgcagcttcagccctggatgtacggagaacagtacaccttcttcagc
aacgacgcacctgggaacccggccatggagaacctgctggaagctctgttggacctgcca
gggtttggtaccaagtgcatggacaaagaggaagaagacaacagaacgagtcctcagtgt
gaaggcgctcggggtggccttttcatgcggccacaggtctcctactccacctggcaaatg
ttcagcagaggcaactggagccgagatggaccgtctcctgactgtcggtgtagcacagag
gacgtccgccggatgctccccgactgcccgcagggtgctggtggactgccgcctccacag
atcaagaggccaactggagacgtcctccaaaatctgacaagttataacatcactgattac
ctggtaaaaacctactctcagatcctcaaaaaaagcctaaaaaccaagaagtgggtgaat
gaattcagatacggaggcttctcccttggaggccgtgccacccagactttatctcaggtc
caccatgtccaagactcggttgtggcaatcaggactcgttatcgagttccacagaacagt
tcactggatcatctgttaaacagactgccagaatttctaagaggactgagcagtcaaaac
aatgtcaaggtgtggtacaataacaaaggatggcatgccatggtgtcatttgtcaacgtg
atgaacaacggcctgctgagagcgagtctgccaccaggtccagagaggagaaaacacggc
atcactgcctacaaccatccgctcaacctcaccaaggaacaactcactgaaatggccatg
atgaccacatccgtcgatgttcttgtctccatctgtgtgatctttgccatgtcctttgtg
ccggccagtttcgtcctttttctgattgaggagcgagtcagcaaagccaaacaccttcag
tttgtcagtggggtcaaaccgatcctctactggctggccaacttcacctgggacatgttg
aactacatcgtcccagccgccatggtggtactgatcttcatctgtttccagcagcagtca
tacgtttcagaaaccaacctgcctgctctcgttctgctgctcctgctgtatgggtggtcc
atcacccctctgatgtacccagcatcctttgtgttcagcgtccccagcacagcctatgta
gttctgacctccatcaacctcttcatcggaatcaacggcagcattgccactttcgtcctg
gagctgtttgttgacgagcatctgaacgaggtgaacaggatcctgaagaaggtgtttctc
atcttccctcacttctgcctgggacgaggactcatcgacatggccaaaaaccaggccatg
gtggacgccttccagagactgggtacaaagcagactctagaccctcttcagtgggacttt
gtagggaagaacctgtttgcgatggcagctgaaggtgttattttctttatcttcaccata
ctactgcagtataagttcttcattcgcttcaggccgtggtgggtcaagcctgagatgcct
cctctcggtccagaggatgaggacatagccagggagagagagagagtcataagtggcaaa
gcccagtcagacatcctcaccatgatagacctgagcaagatttataaagtgggcaggaag
ccggcggtggatcgtctctgcctcgggattccccgtggcgaatgttttggcttactgggg
gtgaacggagcaggaaagacctctacctttcgcatgctgaccggagacacgtccatcacc
tatggggaggctttccttaatcaccacagtgtgcggacagagatggaacgagtccaccag
ctgatgggttactgtccacagtttgacgccatcagcgatttgctgactggtcgggaacat
ctggagctgtacgcccgcctgcggggagtaccagaggagtctgtctccaaggtggcgcaa
tggggggtgaagaagctgggactgacccagtacgccgagcgggaggctggaggctacagc
ggaggtaacaagagaaaactctcgactgccatctccctcatcggggctccgcctgttata
tttctggatgagccgaccactggcatggacccaaaagccaaaagatttttgtggaactgc
atcctcagtgtcacgaaagagggaagagctgtagttctcacgtcccacagtatggaggaa
tgtgaagctctctgcaccagaatggccatcatggtcaacggcagattccagtgtctcgga
tctgtacaacacctgaagaacaggtttggtgatggctacaccatcatcctccgtctggtg
gacactaaatccaatccggactcgtgccccatcagtgcctatatgaagagctccttcccc
agcatcgagctgaaggagcgtcaccagagcgtgctgcagttccagctgccctcgcacgcc
tgctgcctcgctcgtgtcttcgatgtgctggccaacaactatgaggagctgggcatcatc
gacttctctgtttcacagaccaccctggaccaggtgtttgtcaactttgccaaggagcaa
actgatgacgatgatctcacagatgtggtcattggcaacatgacagtaccgaccaacctg
aaggcactggccagcaggattaaccctcctaccatccaaccacaaccaccagtcacgccc
cctcaaccaagcaagactccaaagcaccatgcgaaatcatctgacggcaaaccgaaagag
ggtaaaccaaaaaaggcaaaagttggcaaggtcaaatctaaagaaggcaaggctaatgga
gaaaaaagcagcagcacggcaatgacccaaatacctcagccagaggagacgcatcaagcg
agccggagggtaagcagtggatcaaacagcagtaatggtggtgttcggggagaatccagt
aaatccagtgggtccaaacacagagcagagagttccagtaaaagtccatctgcactattt
atggtcgacagcaacacacaggacagcgcactgtga
DBGET
integrated database retrieval system
