KEGG   Micropterus salmoides (largemouth bass): 119900546
Entry
119900546         CDS       T07309                                 
Symbol
kdm4b
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
msam  Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:msam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:msam03036]
    119900546 (kdm4b)
Enzymes [BR:msam01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     119900546 (kdm4b)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     119900546 (kdm4b)
Chromosome and associated proteins [BR:msam03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    119900546 (kdm4b)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 zf-HC5HC2H JmjN PHD DUF4537 SLX1_C
Other DBs
NCBI-GeneID: 119900546
NCBI-ProteinID: XP_038571518
LinkDB
Position
Unknown
AA seq 1229 aa
MATDMPTDTVPSPHPAPALPPDTAPASPPAVSSSATQDPFSTQNSAIAENAETAVTSEQD
AAPVPTPAQPTDPDVAPGSELPSVSLLPPPPPPVSAKNPSCKIMTFRPTMEEFKDFAKYI
VYMENQGAHRAGLAKVIPPEGWKPRKSYDTIEDMVIPAPITQVVTGQSGLFTQYNIQKKS
MTVGEYRKMANSKKYCTPQHKDFDDLERKYWKNLTFVSPIYGADVSGSIYDEDIQEWNIG
HLNTLLDMVEQECGIVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGQPKSWYSV
PPEHGKRLERLAQGFFPGSSQGCDAFLRHKMTLISPSILKKYGIPFDRITQNEGEFMITF
PYGYHAGFNHGFNCAESTNFATLRWVDYGKMATQCTCRKDMVKISMDVFVRCLQPDRYEL
WKQGKDITMLDHLKATELSSPELETWRQQRVTHRANLLRRAMQKMKQFRRLKLEEVKVLA
EDGIELNAAEYQRQVEEREAQRRQEREERLAREAMMTLEAMEREEQEAAEAAAKAAETPT
VEAQKPEAKPQNLTEDMEKKKQKKPKKSNIHSAITGFEQAFEQFATSGIKNSKTAMVSHP
GSSLTPRQSDVPAVDVSATQPSYSKMKMPTEVKKSRRHPLSKPPMRSPLSIVKQEPTSDQ
ELSSPMPLDSSMKKQEHLWQNHSPNFLAEKAFNSAVAALKPHCAICSLFCPYTKQNKDVL
IVNETNRTSFPRHGSRTSPLVPEMCFSAGNTEPSPTNHHIGEDGTSLLLCCSSCQMQVHA
SCYGVKPDSVGESWMCSRCEAGAWTVECCLCNLRGGALKTTTDNRWVHVICAIAVAEARF
INAIEREPVDVSAVPETRKNLKCVFCHGQNASQNRGACIQCSYENCATSFHVTCAQIAGV
VMMPADWPYVVSVTCHKHKRATPKSRTAPKVPQSLNLGQRGIGRNSDGWYHHCTIIGMAT
QTFYEVNFEDGSYCDNLHPENILSHDCLRTGPPEVGELLVVHMPTGQVLSASFVRQHTHK
FYQVEFHDHSQLMLKQSEIYQLDQELPKRVRTRLAIPVPTEVFSSGDEAQAAKRRCLTSG
LGPSAQTPMETASKPVCPLTTAPVAAPAAKHHSVSTPLTSQPLPQATTTPQEAPATTSGI
QMVTEIPMDTSADLTNVLMASTVASDPTLIPQTTPFQSLNSDPLLSAVSPPQPPQHMSDS
YMPSSGYVSYMETLLHSHFPQDDGPGPLY
NT seq 3690 nt   +upstreamnt  +downstreamnt
atggctaccgacatgcccacggacacggtgccgtctcctcaccctgcaccagccttaccc
cctgacaccgccccagcctcccctcctgctgtcagctccagtgcaacccaagatccgttt
tcgacccagaattcagcaatagctgaaaacgctgaaacagcggtgacctcagaacaagat
gctgctccagttcccaccccggcccagcctacagacccagatgtggccccaggttctgag
ctgccctcggtctctctgctgccacccccaccgcctccagtcagcgccaagaaccccagc
tgcaagatcatgacctttcggcccaccatggaagaattcaaagactttgccaaatacatt
gtctacatggagaatcaaggagctcaccgtgctggcctggcaaaggtgattcccccagag
ggctggaagccgcggaagtcctacgacaccattgaggacatggttattccagctcccatc
acgcaggtggtgactggacagtcaggtctgttcactcagtacaacatccagaagaagtct
atgacggtgggcgagtaccgcaagatggcgaacagcaagaagtactgcacaccccagcac
aaagactttgatgacctagagaggaagtactggaagaacctaacatttgtgtcacccatt
tatggtgcagatgtcagtggctccatctatgatgaggacattcaagagtggaacattggc
catctcaacaccctgctggatatggtggagcaggaatgtggcatagtcattgagggtgtc
aacactccttacctgtactttggcatgtggaagaccacatttgcctggcacacagaggac
atggacctctacagcatcaactacctgcactttggacagccaaagtcctggtattccgtc
ccacctgagcacggcaaaaggctggagaggctggcacaaggcttcttcccgggcagctcc
caaggctgtgacgctttccttcgccacaagatgacgctgatatctccatccatcctgaag
aaatatggcattccctttgacaggataactcagaatgaaggggagtttatgatcaccttt
ccttatggctaccacgctggcttcaaccatggcttcaactgcgcagagtccacaaacttt
gccaccctgcgctgggtggactacggcaagatggctacccagtgtacctgtcgtaaggac
atggtgaagatctccatggacgtgtttgtgcgctgcctgcagccggatcgctacgagcta
tggaaacagggaaaagacatcacgatgttggaccaccttaaggccactgagctcagcagt
cctgaactagagacctggaggcagcagcgtgtaacccaccgagcaaacctcctgcgaagg
gccatgcagaagatgaagcagtttcgtcgtctaaagctggaggaggtgaaggtgctagca
gaggatggcattgagcttaatgctgccgagtaccaacgacaggtggaggagcgtgaggct
caacggaggcaggagagagaggaacgtttagcccgagaggccatgatgaccctggaggcc
atggagcgcgaggagcaggaagccgccgaggctgctgctaaagcagcagagactccaact
gtagaggctcaaaaacctgaggccaaaccacagaatttgacagaggacatggagaaaaag
aagcagaaaaagccgaagaagtcaaatatccacagcgccatcactgggtttgagcaagcg
tttgagcagtttgctacatccggcatcaagaattcaaaaacggccatggtcagtcatcca
gggagctctcttaccccaagacagagtgacgtcccagcagtggatgtgagtgccacccag
ccatcctactccaagatgaagatgccaacagaagtaaaaaagagtcgccgtcaccccctc
agcaagccgcccatgcgctcccctctgtccatcgtcaagcaagaaccaacaagcgaccaa
gagctgtcctcacccatgccgctggacagcagcatgaagaaacaagagcacctgtggcag
aatcactctcccaacttcctggcagagaaggccttcaattctgcagtggcagcactcaaa
ccacactgtgctatctgttcactcttctgtccctacacaaagcaaaacaaagacgtctta
attgtgaatgaaaccaatcgcacctcctttccccgtcatggcagtcggactagtccactg
gtcccagagatgtgcttcagcgcaggcaacactgagccttcacccaccaaccatcacatt
ggagaggatgggaccagtcttctgctctgctgttcatcttgccagatgcaggttcatgcc
agttgctacggtgtaaagccagattctgtcggtgaatcctggatgtgttccaggtgtgaa
gcaggagcctggacagtggagtgttgtctctgtaatttgcgtggtggtgctttgaagact
accacagacaaccggtgggtccatgtcatctgtgccatcgctgtggctgaagctcgcttc
atcaacgccattgagagggagccagtggatgtcagtgctgttcctgaaacacgcaaaaat
ctgaagtgtgtgttctgccacggccagaatgccagtcagaaccgcggcgcctgtatacag
tgctcatacgagaactgcgccacctccttccatgtcacctgtgcccaaatcgctggagta
gtcatgatgccggccgactggccctacgtggtgtccgtcacttgccacaagcataaaagg
gccactccaaagtctcggacagcgcccaaagtcccacagagcctgaaccttggccagaga
gggattggccgcaacagtgatggctggtaccaccactgtaccatcatcggcatggcaacg
cagactttctatgaggtcaactttgaagatggctcatattgtgacaacctgcacccagaa
aacatactaagtcatgactgcctgcgtaccggtcctcctgaggtgggggagttgcttgtg
gtccacatgcccacaggtcaggtcctcagcgcttcctttgtcagacagcacacccacaag
ttctaccaggttgagtttcatgaccacagtcagctgatgctaaaacagtcagagatctat
cagctcgaccaggaactgcccaaaagggtccgaaccagactggccattcctgtcccaacg
gaggtattttcttcaggagatgaagcccaagcagccaaacgccgctgcctgacctcaggc
ttaggcccttccgctcaaacccccatggagactgccagtaagcccgtctgcccccttact
acagccccggtagcagcaccagcagcaaaacatcacagtgttagtacaccgctgacctca
caacctctgccccaggccaccacgaccccacaggaggccccggccacaaccagtggcatt
cagatggtcactgagatcccaatggacacaagtgccgacctcaccaacgttctaatggcg
tcaaccgtggcctcagaccccacgctgattccacagacaaccccttttcagtcattgaac
tctgaccccctcctgtctgccgtttcccctccccagccgccacagcacatgtccgacagc
tacatgccgagcagtggctacgtttcctacatggagacccttctccattcacatttccct
caggacgatggacccggacccctgtattaa

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