Micropterus salmoides (largemouth bass): 119900589
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Entry
119900589 CDS
T07309
Symbol
rubcn
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119900589 (rubcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119900589 (rubcn)
Membrane trafficking [BR:
msam04131
]
Autophagy
Other autophagy associated proteins
Others
119900589 (rubcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
LRRFIP
RecO_C
CMD
Motif
Other DBs
NCBI-GeneID:
119900589
NCBI-ProteinID:
XP_038571603
LinkDB
All DBs
Position
Unknown
AA seq
1023 aa
AA seq
DB search
MICGLRCFHSQLGQAGLTWLKTGSPVNSSYLTAGVKLRCTKHDRELSGKLAALYGTRFRP
DDMEISAEGEAEERRRELWKLLSSLKTTVEGLVSTNNPNVWSRYGGLQRLHKDMNNILSH
GLKNEQVYYKQRDYWPFVWCVRYISPQLASHVEQFSHLEPVLSSGMQGVGESYKAERWLL
HSLQVHRLSTQLRPLLRHLGHTRKYYNDDAFLLSEPHVTAMFQCLEAVEQNNPKLLAQID
TVGLSPLKGPSCLGLLKSQSLCVLPGAGGAWRSADLAPRGESLNRRLTTSNCSLREAVTT
SHSSGHTTGVESQNSNSTNTTSPGSSLGAPWVCVSRPEESEPGVTPTPGPVSAPCVSITQ
SPPATSLQADAVDSGDGDYDVDDGPEYLAIGNLGQRSRCDSRSSTLSSEQDVTQDQSVPQ
CSLARPPPRRSSFSEGQRGPGRGSRGHTRSFSDTGVNQKLRNESAVDGCMKDYSGPFSPQ
RSDASTASSLYMESYGCPYRSIPDGMFRKPSEGQSLISYLSEQDFGSCADLEKENAHFSI
SESLIAAIELMKYNLRREEEEREEEGDSDCEIQQLKQKIRLRRQQIRRSRPPPCATSQHI
FNSTDSGGSRRSSQDSCQGLSDSGSAEEVEECELRDGCEGQSLLAVSQNGLSLSLASLFS
DADIKRSVCSSGRSFLSSDSISPSFLQSNSAESVAMGLLRQFEGMQLPAASELDWLVPEH
DAPQKLLPIPDSLPISPDDGEHADIYKLRIRVRGNLEWAPPRPQIIFNIHPAPKRKIVVA
KQNYRCAGCGTRIDPDYIKRLRYCEYLGRYFCQCCHENAQAVVPARVLRKWDFSKYYVSN
FARDLLSKIAGDPLFNPSDINTGLYKKIKALEAVRVLRVQLFHMKNLLKTCRFAKELLDL
FDSLPGHLTEDLHLFSINDLTAVRNGDLAPRMKELLKLGTTHVAGCVLCQAKGFVCEFCS
NDKDIIFPFQLNKCQRCEECHACYHRSCFRTGKDCPRCQRLAERRERMARKNMEEQEDEG
GGT
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgatatgcggcctccgctgttttcattcacagctcggacaggcagggctgacatggctg
aagactggaagtccggttaattcaagctaccttactgctggggtgaaactccgttgtaca
aaacacgacagggagttatccgggaagctggcagcattgtacggcactcgattccggccg
gatgacatggagatctcggctgagggagaggcggaggagcgcaggagggagctctggaag
ctactgtccagcctgaagaccacggtggagggtctcgtgtctaccaacaaccccaacgtg
tggtcacgttacggcggcctgcagcggctccacaaggacatgaacaacatcctgagccat
ggactgaagaacgagcaggtgtactacaagcagagagactactggccatttgtgtggtgt
gttcgctacatcagcccccaactagcctcgcacgttgaacagttcagtcacttggagcca
gtactgagcagtgggatgcagggcgtcggtgaaagctacaaggctgagcgctggctgcta
cacagcttacaggtccacaggctgtcgactcagctcagacctctgctccggcacctggga
cacacacgtaaatactacaacgatgatgcctttctgctgagcgagccccatgtgaccgcc
atgttccagtgtcttgaagctgtggagcaaaataaccccaaactgttggcccaaatagac
actgtcgggctgtctcctctgaagggcccatcatgtctgggcctgttgaagagccagagc
ctgtgtgtgttgccaggggctggaggggcttggaggagtgctgacttggctcccagagga
gaatctctaaatcgtagactcaccacctccaactgctccctccgagaagcagttaccacc
agccacagctctgggcacacaacgggagtcgaatcccaaaacagcaacagcacaaacact
acctctccaggcagcagcctgggagctccctgggtgtgtgtgtccaggccagaagagagc
gagccaggtgtgacgcccactcctggccccgtctcggccccttgcgtctccatcacacag
tcccccccggccacctcccttcaggctgatgccgtggactctggtgacggcgactatgac
gtggacgatggtccggagtacctggccattggtaacctggggcaacgtagtcggtgtgac
tccagaagctctaccctcagcagtgagcaggacgtgacacaggaccagtccgtgccacag
tgttccctggctcggcccccacccagacgctcatctttctcagagggccagagggggccg
ggccgagggtcccgaggacacacacgctcgttttctgacacaggggtcaatcagaaactc
aggaatgaatcagcagtagacggctgtatgaaggactacagcggccctttctcacctcag
cgcagtgatgccagcactgccagttccctctacatggagtcttatggttgtccatacaga
agcattccagatgggatgttcaggaagccgtcagagggtcagagcctcatcagctacttg
tcagagcaggactttggcagctgtgctgaccttgaaaaggagaacgctcatttcagcatt
tcagagtcccttattgctgccatcgagctgatgaagtacaacctgcggcgtgaggaggag
gagcgcgaggaggaaggcgacagcgactgtgagattcagcagctcaaacagaagatccgc
ctgcggaggcagcagatccgacgcagccgcccgccgccctgcgcaacctcccagcacatt
ttcaactcgacagacagcggaggctccaggaggagctctcaggactcctgccagggcctt
tctgactccggctcggctgaggaggtggaggagtgcgaactacgagatggctgtgagggt
cagtccctgctggcggtgtctcagaacggcctctccctgtcactcgcctccctcttctca
gatgcagacattaagcgcagcgtatgctccagtggcaggtcctttctcagctcagattcc
atctctccatccttcctccagtctaactcagctgagtcagtagccatgggtttactcagg
caatttgaaggcatgcagcttcctgcagcctcggagctcgactggctggtcccagaacac
gatgctccacaaaagctgctgcccattcctgactctctgccaatctcgcctgatgatggt
gaacacgccgacatctacaagctgaggattcgggtccgaggcaacctggagtgggctccg
ccccgtccgcagatcatcttcaacattcatccagcccccaagaggaagatagttgtggct
aaacagaactaccgctgcgctggctgtggcacccgcattgacccagattatatcaagcga
ctgcgttactgtgaatacctcggccgttacttctgccagtgctgccatgagaatgcccag
gcggtggttcctgcccgagtgctgaggaagtgggacttcagcaagtactatgtcagcaac
tttgcccgggacctgctgagcaagatcgccggagaccctttgttcaaccccagcgacatc
aacactggcctgtacaagaagatcaaagctctggaggctgtcagggttttgagggtgcag
ctgtttcacatgaaaaatctcctgaagacctgtcgctttgctaaagagttgctggacctg
tttgacagcctgccaggtcacctgacagaggaccttcacctcttctccatcaatgacctc
actgctgtgcgcaacggtgatctggctccccggatgaaagagctgcttaaacttggtacc
acgcacgtagctggctgtgtgctgtgccaggcgaagggctttgtgtgcgagttctgcagc
aacgacaaagacatcatcttccccttccagctgaacaagtgccagcgctgcgaagaatgc
catgcgtgttaccatcgcagctgcttccggacaggtaaagactgtcctcgatgtcagcgt
ctggcagagcggagagagagaatggcacgcaaaaacatggaggaacaagaagacgaggga
ggcgggacctag
DBGET
integrated database retrieval system
