Micropterus salmoides (largemouth bass): 119900658
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Entry
119900658 CDS
T07309
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msam01002
]
119900658 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119900658 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msam04147
]
119900658 (usp13)
Enzymes [BR:
msam01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119900658 (usp13)
Peptidases and inhibitors [BR:
msam01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119900658 (usp13)
Ubiquitin system [BR:
msam04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119900658 (usp13)
Exosome [BR:
msam04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119900658 (usp13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
UBA_9
Motif
Other DBs
NCBI-GeneID:
119900658
NCBI-ProteinID:
XP_038571737
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MAADLGELLVPFMPTIRVPRTGDRVFKSECAFSFDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMHLKRHVKEKATGAAGGAIPRRRNGKVFLDLELNRDFNGEDYEYEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAVLNAPSAYKKQEPESWEEEIQVSRHARSLRQLD
NGVRIPPSGWKCQKCEMRENLWLNLTDGAVLCGKWFFDGSGGNGHALEHYRETNYPLAVK
MDTITPDGADVYSFEEEEAVLDPHISEHLSHFGIDMLQMQKRTENGHHTDNNSRPRVSEW
EVIQESGMKLKAVFGSGYTGIKNLGNSCYLGTVMQVLFSIPDFQRMYVGNLQRIFDYSPL
DPSQDFATQMAKLGHGLLSGQYSKPPMKSELIEQVMKEEHKVLNWHQQKGISPRMLKALV
SRGHPEFSSNRQQDAHEFLLHMINLVERNSAGSENPSDVFRFLVEERVQCCQTRRVRYTE
RVDYCIQLPAPIEAATNREELLVYEAKRKDAEENMRAPPEPVRARIPFTACLQAFTEPEN
VPDFWSSALQAKSAGVKTSRFSTFPEYLILQIKKFTFGVDWVPKKLDLAIDVPDFLDLSR
LRATGLQAGEEELPDLMPPIVLPEDTRDNSMGSIDSPEIDEVAVMQLAEMGFPLEACRKA
VYYTGNMGPEMAFNWIIAHMEEPDFAEPLTLPSMMDPGPSTSDSPMGATLLGNSPPEESI
AILTSMGFPRAHSIQALKATNNNLERALDWIFTHPEEEESDALSDMADTEPNDNAFSNAN
SHSDSTLSPDRDTSGPRVKDGPGRYELFAFISHMGASTMSGHYVCHIKKEGRWVIYNDHK
VCLSERPPKDLGYIYFYHRLSSS
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacctaggagaactgctggtcccgttcatgcccaccatcagggtgcccaga
accggagacagggtttttaagagcgagtgcgccttttccttcgactctccagagtcagag
ggaggcctgtatgtgtgtatgaacacattcctgggctttggacgggaacatgtggagagg
cattatcgcaaaacaggacagagtgtttacatgcacctcaaacgccatgtcaaagagaaa
gccacaggagctgcaggaggcgccatacccagacggagaaatggaaaagtgtttctagat
ttagagctaaaccgtgattttaacggcgaggactatgaatatgaggacgaggccaagctt
gtcatttttccagaccacttcgagatcccattaccaaatattgaggagttgcccgctctg
gtgaccatcgcctgtgacgctgtgctcaatgcaccatcagcttacaagaagcaggagcct
gaatcctgggaggaggagatccaggtgtccagacatgcgaggagcctcagacagctggat
aacggggtcaggatcccgcctagtggctggaagtgtcagaagtgcgagatgagggaaaac
ctgtggctgaatctgacagatggagcagtgctctgtgggaagtggttttttgatggtagc
ggaggcaacggccacgctctggagcactacagagagaccaactaccccttggctgtcaaa
atggacaccatcaccccagacggagcagatgtctactcatttgaggaggaggaagcagtg
ttggacccccacatatcagaacacttgtcacactttggaatagacatgctacagatgcag
aaaagaacagagaatggtcaccacacagacaataactcccggccgcgggtcagcgaatgg
gaggtgatccaggagtcgggcatgaagctgaaggcggtgtttggttctggttacacaggc
atcaaaaacctcggcaacagctgctacctcggcacagtgatgcaggtcctcttcagcatc
ccagacttccagaggatgtatgtggggaatcttcagaggatatttgactattcacctctt
gaccccagccaggacttcgccacacaaatggctaaactaggacacggactgctctcaggc
cagtactccaaaccacccatgaaatctgagctcattgaacaggtgatgaaagaagaacac
aaggtattaaactggcaccagcagaagggcatctctcctcggatgttgaaggccctggtc
agccggggacacccagagttttcctccaacagacaacaagatgcccacgagttcctcctg
cacatgatcaacctggtggagaggaacagtgcaggctcagagaatccaagcgacgtcttt
cgtttcctggtggaggagcgagttcagtgctgccagactcgtcgagttcgttacactgag
cgggtggactattgcatccagctgccagcccccattgaggcggctacgaatcgagaggag
ctgctggtgtacgaggccaagcggaaggacgctgaggagaacatgcgggctccccctgag
ccggtaagagcgcggatcccctttaccgcgtgcctgcaggccttcacagagcctgagaac
gtccccgacttctggagctcagcgctgcaggccaagtcagccggagtcaaaacttctcgt
ttctccaccttcccagagtatctgattttgcagatcaagaaattcacatttggggttgac
tgggtgccgaagaaactagacttggccatagatgttccagactttctggatctgagccgg
ctgcgggctacaggactgcaggcgggtgaagaggagctgcctgacctcatgcctcccatc
gtgctacctgaggacactagagataactccatgggctccatagactctccagaaatagac
gaggtggcagttatgcagctggcagagatgggctttccgctggaggcctgtaggaaggcg
gtctactacacaggcaacatgggccctgagatggccttcaactggatcatagcccacatg
gaggagcctgactttgcagaacctctcactctgccttcgatgatggatcctggtccctcc
accagtgacagccccatgggtgccacacttctaggcaactcaccccctgaggagagcatc
gccatcctcacttccatgggcttcccccgcgctcacagcatccaggcactcaaagccacg
aacaataacctggagcgagcactcgactggatcttcacccatccggaggaggaggagagt
gacgccctttcagacatggctgacacagagcccaacgacaacgctttttccaacgccaac
tcgcacagtgactccacgctgtccccagacagagatacctcggggccgcgagtcaaagat
ggaccaggacgttatgagctctttgctttcatcagccacatgggagcatccacaatgtct
ggacattatgtttgtcacatcaaaaaggagggaaggtgggtgatctacaacgaccacaaa
gtgtgtttgtcagaaaggcctccaaaagacttaggctacatctacttttaccatcgactg
tctagcagttaa
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