Micropterus salmoides (largemouth bass): 119900716
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Entry
119900716 CDS
T07309
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04010
MAPK signaling pathway
msam04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119900716
04020 Calcium signaling pathway
119900716
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msam04040
]
119900716
Ion channels [BR:
msam04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
119900716
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
119900716
NCBI-ProteinID:
XP_038571832
LinkDB
All DBs
Position
Unknown
AA seq
2522 aa
AA seq
DB search
MLELGSCSVSSQSLTGDHNALGLPRGPAGSECPVVSLGMGTMCGSSTPRHYILPSSPEDW
QKHRAGLAGGSSLFSESHSLLEPRSLSTSYDTLYLPHMSGHAAPLHPNRLGLSLDVVSTF
EVGGGMLGLDGDSAVSPNVIKRRRGGLIEQRDIVKAHQAHKIQSTPQARRKEWEMARFGD
DVPGLLSSGDGGSERNRNRDGAAVSTGGISPAFKQTKAQRARTMALYNPIPVRENCFTVN
RSLFIFGEDNVVRKYAKKITEWPPFEYMILTTIIANCIVLALEQHLPGEDKTPMSKRLEK
TEPYFIGMFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFIVVLSGILAAAGAHMNISVDL
RTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGMLLFFAILMFAIIGLEFYSGK
LHRTCEPLPGILENETLDSSELEFPCGVRNCPPKYTCNNWIGPNDGITQFDNILFAVLTV
FQCITMEGWTTVLYNTDDALGPSWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVE
NRRAFMKLRRQQQIERELNGYRAWIDRAEEVMLAEENKNAGPSALDVLKRATTIKRRGMD
VMHQGQQGEEQYGDISSVGIPMARTSIRSAKRGPTAYFRRKERLLRISIRRVVKTHTFYW
TVLGLVALNTLCVAIVHHNQPLWLSNFLYYAEFLFLALFLTEMFLKMYSLGPRLYFHSSF
NCFDCSVIVGSIFEVLWGFFRPGTSFGISVLRALRLLRIFKITKYWASLRNLVVSLMNSM
KSIISLIFLLFLFIVVFALLGMQLFGGRFIFEDYTPTNFDTFPAAIMTVFQILTGEDWNE
VMYNGIRSQGGVKSGMWSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEAEA
AFNQKHALQKAKEVGPLSSFMSSEGSRRRRPYLYRKRAIHRSRPTYSCSLEEAQGSIREG
RPPLNSSNSFMSRRERRKRMTMSVWEQRTSQLRRHRQMSSREILFNSTSEEKDGPSALAQ
AQHGHPLSLHRKAMEHTPSGSLKRLTDPLASPTKNQASGSSISVEMPLDATLSSDVPEPP
VSVLVPESLDPTNLPLPDASVSVAIPKPITEGRKLGVNQSHNTASERRSPRLNGERQHRA
VKKFRPPENIDTLTPEMGGPGGIRGRRALHDHHHHQSGARSQGSSPGNGSHLVSSLVSRE
GKKNPGKVEEKEAETKKEEEVTKPDESRRGDRTEGGVTEPPDNQSHSGDQCPQKQEEPPQ
KSDLSPPAIPESNKEENDNEQDRDKSQLISSVIVEVSNVQSCLELSTITVNSKDPETCKS
EKEEAEDTKPFNIVTPDSMFIFKPDNPVRQACHYMVNLRYFEMSILLVIAASSIALAAED
PVATSSDWNKVLRYFDYVFTGVFTFEMIIKMIDQGLILHDGSYFRDLWNILDFIVVVGAL
VAFALSNVMGNNKGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILI
VYKLFMFIFAVIAVQLFKGKFFYCTDSSKDTEKDCQGYYIDYGKDKKELKRRDWKRHEFH
YDNVIWALLTLFTVSTGEGWPQVLQHSVDVTEEDRGPSHGNRMEMSIFYVIYFVVFPFFF
VNIFVALIIITFQEQGDKMMEECSLEKNERACIDFAISAKPLTRYMPQNRHTFQYRLWHF
VVSPSFEYTVLAMIALNTIVLMMKYYSAPPAYEIVLKHLNTAFTVLFSIECVLKIMAFGF
LNYFRDTWNIFDFITVLGSITENVVDLQSDMSFLKLFRAARLIKLLRQGYTIRILLWTFV
QSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLNDKTHITQHNNFKTFSGALMLLFRSAT
GESWQEIMLSCLGGQKCEQDPSLSPAPTSDQEGGCGSDFAYFYFVSFIFFSSFLMLNLFV
AVIMDNFEYLTRDSSILGPHHLDEFVRIWGEYDRAACGRIHYTDMYEMLTNMSPPLGLGK
KCPSKVAYKRLVLMNMPVDEDMSVHFTSTLMALIRTALDVKIARGGEDRNQMDLDLQKEI
SVIWPHLSQKTLDLLVPIHKASDMTIGKIYAAMMIMDYYKQSKAKKLRQQLEEQKHAPMF
QRMDASSLPQEILCNAKSLSFLRHSAGSALTRGGFVALSPISPQEMFLQPLSRSREEKED
EDDDYRSPYHPYHHPHHHHHHLHTLVPDVVEYNRVIQQARQDPTVIKSPQRTASIRASSM
PRLAVDPQPGMSADSKLMKRSFSTIGDQCVNGLWQEQHSLERISPDGTYMPRQRSYRGPR
INHRETSTHERGRSKERRHLLSPDVSRCNSEERSRDPSCERGQSRSPSEGRTHTSQRQVN
TSGSPAHSASESSTPRNRRQLPQTPSRPRPYISYSPLVCQAHTSPTPASSSEGPTQPQDG
PGGSKETSWRADKEGGPLTASEGSSGGQVSGLSHPSPHRYISEPYLPFHEDLSGGEAGEG
QDTLTFETAIATSLGRANAISSAPQLRHSWQVPNGHFRKHLGQASPARASELPSDTDEDD
RC
NT seq
7569 nt
NT seq
+upstream
nt +downstream
nt
atgctggaactgggctcctgttcggtcagctcgcagtctctgacaggggaccacaatgct
ttggggctacctagaggtccagcagggtcggagtgtccagttgttagtctgggcatgggt
acaatgtgtggtagcagcacccccaggcactacatccttccctcttctccagaggactgg
cagaagcatcgtgcaggactggccggtgggtcgagcctcttttctgagtcccactccctt
ctggagccacgaagtctctcaaccagctatgacaccctctacctcccacacatgtctggc
catgctgcccctctgcatccaaaccgtcttggcctgtctcttgatgtggtatcaactttt
gaagttggaggggggatgctggggttggatggagattcggcggtcagtcccaatgtgatc
aagagacgtcggggtggcctgattgagcagagggacattgtcaaagcccaccaggctcat
aagattcaaagcacaccacaggcacgacgcaaggagtgggaaatggcccgctttggagac
gacgtcccgggcttgttgagctcaggggatggggggtccgagcgcaaccggaaccgcgat
ggggcggccgtgtccacaggtggcatctccccagcctttaagcagaccaaagcgcaacgt
gcccgcaccatggccttgtacaaccccatcccggtcagggagaactgtttcaccgtcaac
aggtctctcttcatctttggcgaggacaacgtggtcaggaagtacgccaagaaaatcact
gagtggcctccgtttgagtacatgatcctcaccaccatcatcgccaactgtatcgtcttg
gctctggagcagcaccttcctggagaggacaaaacacccatgtctaagagactggagaag
acagagccctacttcatcgggatgttctgttttgaggctgggataaagatcatcgccctg
ggctttgtatttcataaaggctcctacctcaggaacggatggaacgtaatggacttcatt
gtggtcctcagtgggatcctggctgcagcaggggcgcatatgaacatctcagtggacctg
aggaccctgagggcggtgcgagtgctccgacccctcaaactggtctcaggcatccccagt
ctgcagatagtcctgaagtctataatgaaggccatggttcctctgctgcagattggcatg
ctgctcttctttgcaatcctcatgtttgccatcattggcctggagttttacagcggcaaa
ctgcaccgaacctgcgaaccactgcctggaatactggaaaacgagacactggactcctct
gagttggagttcccgtgtggcgtgcgaaattgtccgcccaaatacacctgcaacaattgg
attggccccaatgacggcatcactcagtttgacaacatcctgtttgctgttctcactgtc
ttccagtgcatcactatggagggatggaccactgtactctacaataccgacgatgccttg
ggccccagctggaactggctgtacttcatccctctcatcattatcggctctttctttgtc
ctgaacctggtgctgggagtcctctctggggaatttgccaaggagagggagagagtggaa
aaccgcagggccttcatgaaactgagacgccagcagcagattgagagagagctcaacggc
taccgggcctggatcgacagagcagaggaagtgatgcttgcagaggaaaataagaatgca
ggaccctctgcccttgatgtgttaaagagagccaccaccatcaagaggagagggatggat
gtgatgcatcaagggcaacaaggggaggaacaatatggtgacatctcctctgttggcatc
cctatggccagaacaagtatcaggagtgccaagcgaggtccaacagcgtattttcgccgt
aaggagcgtctcctgcgcatctccatccggcgtgtggtgaagacacacactttctactgg
acagtgctgggcctagtggctctcaacacgctgtgtgtggccattgttcaccacaaccag
cctctctggctgtccaacttcctctactatgcagagttcctgttcctcgctctgttcctg
actgagatgtttctaaagatgtacagcttgggaccgcgtctctacttccactcctccttc
aactgctttgactgcagtgtaatcgttggtagcatttttgaagtgctgtggggattcttc
aggcctggcacttcctttggcatcagtgtcctgcgtgctctccgtctgctgaggatcttc
aagatcaccaagtattgggcgtctctgagaaacctggttgtctctctgatgaactcaatg
aagtccatcatctccctcatcttcctcctcttcctcttcattgttgtcttcgcactcctt
ggcatgcagctcttcggtggcaggttcatctttgaagactacactccaacaaactttgac
acctttcctgcagccatcatgaccgtctttcagatcctgactggagaggactggaacgag
gtgatgtacaacggtattcgctctcaaggaggagtgaagtctggcatgtggtcctctatc
tactttatagtgctcacactgtttggaaactacactcttctgaatgtcttcttggccatt
gctgtggataaccttgccaatgcacaagaacttacaaaggatgaagaggaagctgaggca
gcgttcaatcagaagcacgctctccagaaggcgaaggaggtcggaccgttgtcctccttc
atgtcttcagagggaagccggaggaggcggccctacctgtacaggaaaagagccatccat
cgcagccggcctacctactcctgctccctggaggaggcccagggcagcatcagggagggc
cgtcccccactcaactcttctaactctttcatgtccaggagagagagaagaaaaaggatg
accatgtcagtgtgggagcagaggaccagccagctgcggagacaccgccagatgtccagc
cgagagatcctgttcaacagcaccagcgaggagaaggacgggccttctgctctagcccag
gcccagcatggccatcccctgtcactgcaccgcaaggctatggagcacacgccgtccggg
agtttgaagcgcttgacggaccccttagcctccccaaccaagaaccaggcatcaggctcc
tccatatctgtggagatgcctctggatgccactctctctagtgacgtacctgaaccccca
gtttcagtgcttgtgccagagtcgttggatcctacaaacttgcctcttcctgatgcttct
gtgtctgtggccataccaaagcccatcactgagggcagaaaactgggggttaatcagagt
cacaacaccgccagcgagcgtcggagccccagattgaatggcgagcgtcaacacagggca
gtaaagaagttcagaccaccagagaacattgacacactgactcctgagatgggaggtcct
ggtgggatccggggcaggagggccctgcacgaccaccatcaccatcagagcggggccagg
agtcaggggtcatcacccgggaatggaagccacttggtgagcagcttggtcagcagagag
gggaagaaaaatccagggaaagtagaggagaaggaagctgagaccaaaaaggaggaagag
gtgaccaaaccagatgagagcagacgtggtgacaggactgagggaggagtcactgaacca
ccagacaaccagagccacagtggtgaccagtgtcctcagaaacaggaagaacctcctcag
aaatcagatctgtctccacctgcaatcccagagagtaacaaagaagagaatgacaacgag
caggaccgggataaatctcagctcatctccagtgtgattgtcgaggtgtccaatgttcag
tcatgtctggagctctccacaatcacagtcaacagtaaggaccctgaaacctgtaagtca
gagaaggaggaggcagaggacacaaagcctttcaacattgtgactccagacagcatgttc
atcttcaaacctgacaacccggtgcgtcaagcatgtcactacatggtgaacctcaggtac
tttgaaatgtccatcctgctggtcatagctgctagtagtatagcgctggctgctgaggac
cctgtagccacctcctctgactggaataaggttctgcggtattttgattatgtgttcact
ggagtcttcacatttgaaatgattataaagatgattgaccagggtctgatcctccatgat
ggctcctacttcagagacctgtggaacatcctagactttatcgtcgtggtgggagcattg
gtggccttcgccctctccaatgtgatgggaaataacaaaggacgggacattaaaaccatc
aaatctctgagagtgttgcgtgtcctcagaccactgaagactatcaagcgacttcctaaa
ctcaaggcggtgtttgactgtgtggtgacgtctctgaaaaacgtcttcaacatcctgatt
gtctataagctttttatgttcatctttgccgtcattgctgtacagctcttcaaggggaag
tttttctactgcaccgacagttcgaaggacacagagaaggactgccagggttactacatt
gactacggaaaggataaaaaagagttgaagagaagagactggaagaggcacgagtttcac
tacgacaacgtcatctgggctctgctcacactcttcactgtgtccactggagagggatgg
cctcaggttctacagcactccgtagatgtgacagaggaggacagaggtccgagccacggc
aacaggatggagatgtctatcttctacgtcatctactttgttgtctttcctttcttcttc
gtcaacatcttcgtggcgctcattatcatcaccttccaggaacagggggataagatgatg
gaggagtgcagcttggaaaagaatgagagggcgtgcatagactttgccatcagtgccaag
cccctgactcgttacatgccccagaatcggcacacgttccagtaccgtctgtggcatttt
gtggtgtcaccctcttttgagtacaccgtcctggccatgatcgcactcaacaccattgta
ctgatgatgaagtattactctgccccgccagcatatgagatcgtactgaagcacctgaac
acagctttcactgttctcttttccattgagtgtgtcctcaagatcatggccttcggcttt
ctgaactactttcgagacacatggaacatttttgactttatcactgttttgggcagcatc
acagagaacgtggtagacttgcagtctgacatgagtttcttgaagctgttccgagcagct
cgtctgatcaaactgctgagacaaggttacaccatccgaattcttctgtggacctttgtc
cagtccttcaaggctttgccctatgtctgcctgctcatcgccatgctcttcttcatctac
gccatcattggaatgcaggtgtttgggaacattaagctgaatgacaagactcacattacc
cagcacaacaacttcaagaccttctctggtgctctgatgctgttattcaggagtgccaca
ggggaatcttggcaggagattatgttgtcgtgtctggggggacagaagtgtgagcaggac
ccctctctttccccggcaccgacgtctgaccaggagggtggctgtggctccgactttgcc
tatttctactttgtctcattcatctttttcagctctttcctgatgctgaacctatttgtg
gctgtgatcatggataactttgagtatctgacaagagactcgtccatcttgggtccacac
cacctggatgagtttgtccggatctggggggagtatgaccgtgccgcctgtggtcgtatc
cattacactgacatgtatgagatgttgaccaacatgtcgccacctctaggcctgggcaag
aaatgcccctccaaggtggcatataagagactagtcctgatgaacatgcctgtggacgag
gacatgtccgttcacttcacctccaccctcatggccctcatccgcactgccctggatgtc
aagatagccagaggaggggaggatcgaaatcagatggacctggacctgcagaaggagatt
agtgtcatctggccccatctctctcagaagacattagacctgctggttcccattcacaaa
gccagtgacatgaccattggcaagatctatgccgccatgatgatcatggactactacaag
cagagcaaggccaagaagctccgacagcaactggaagagcagaaacatgctcctatgttc
cagcgtatggacgcctcctctctgcctcaagaaatcctatgcaatgccaaatccctttca
ttcctccggcatagtgctggatctgctctcaccagaggaggttttgtggccctcagcccc
atctctccacaagagatgttcctgcagccgctgtctcgctccagggaggagaaagaggat
gaggacgacgactaccgttcaccctaccatccataccaccacccacatcaccaccaccat
catttacacacactggtaccagacgttgtggagtataaccgagtgatacagcaggccagg
caggacccaacagttattaaatcacctcagcggacagcatctatcagagcgtcctccatg
cccagactggctgttgatccacagcccgggatgtcagcagacagtaagctgatgaagcgc
tccttctccaccattggagaccagtgtgtgaatggcctctggcaggaacaacactctctg
gagagaatcagtcctgacggcacatacatgcctcgtcaaaggagctacagaggtcctaga
atcaaccacagagaaacaagcactcacgagagagggcgatctaaggaacggcgccacctt
ctgtctcctgatgtatcccgctgcaactctgaggagcgcagccgggatccatcatgtgaa
aggggacagtcccgttcgcctagcgaaggacgcacacacacctcacagagacaggtgaac
acatcaggcagccctgcccattcagcctcagagtccagtactcctcgtaatcggcggcag
ctaccacagacaccctctcgcccacggccatacatctcctactcccctctggtctgccaa
gcccacacctctcccacaccagcaagctcctctgagggaccgacccagcctcaggacggc
cctggtggttccaaggagacctcgtggagggctgacaaggagggaggacccttgactgca
agtgaggggtcatccggaggtcaggtttcaggactgagccacccttcccctcaccgctac
atctcagagccctacctcccattccatgaggacttaagcggtggagaggcaggggagggg
caggacacccttacttttgaaactgccattgcaaccagcctgggacgggccaatgccata
agctccgcccctcagctcagacactcctggcaggttcccaacgggcatttccggaagcac
ttgggccaggcaagtccggctagggctagcgagcttccaagtgacacagacgaggatgac
cgctgctaa
DBGET
integrated database retrieval system
