Micropterus salmoides (largemouth bass): 119900796
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Entry
119900796 CDS
T07309
Symbol
rxrgb
Name
(RefSeq) retinoic acid receptor RXR-gamma-B isoform X1
KO
K08526
retinoid X receptor gamma
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03320
PPAR signaling pathway
msam04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
119900796 (rxrgb)
03320 PPAR signaling pathway
119900796 (rxrgb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119900796 (rxrgb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
msam03310
]
119900796 (rxrgb)
Transcription factors [BR:
msam03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
119900796 (rxrgb)
Nuclear receptors [BR:
msam03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
119900796 (rxrgb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
119900796
NCBI-ProteinID:
XP_038571973
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MIVLGLDIDHCCHWEKPCFAAAPPPSLGPRVEPPCRVESGWERNALGCGAAPTLGNRRNN
SHSMDSNDPYIHLNSTGPMSTVHTHPSHMGGMVGHPSVISTSRPLPSPMSSLGSPMNGLA
SPYPVITSSLGSPSVSLPSTPNMNFGPLSSPQMNSMNSVSSSEDIKPPPGLQNLGNINYQ
CTSPGGMSKHICSICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDSKECLIDKRQ
RNRCQYCRYQKCLAMGMKREGVCAAVQEERQRGKERGESEVESTSSFNEEMPVDKILDAE
LAVEPKTETYSDGSPSNSTNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLR
AGWNELLIASFSHRSVTVKDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMHM
DKTELGCLRAIVLFNPDAKGLSNPPEVEGLREKVYASLESYTKQKYPDQPGRFAKLLLRL
PALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtgttggggcttgatatcgaccactgttgtcattgggagaagccctgttttgcc
gccgccccccccccctcgctgggcccccgtgtagagccgccttgcagagttgagtcgggc
tgggagaggaatgcgctgggatgcggagcagcaccgactctaggaaatcgacgcaacaac
tcgcacagcatggacagtaatgatccgtatatacacctcaactctacagggccaatgagc
acggtccacacccatccctctcacatgggtggcatggtgggccacccgtcagtcatcagc
acctccaggcccttaccgtcccccatgtcctccttgggctcgccgatgaacggcctggcc
tcgccctaccccgtcattacatcttctctgggctcgccctctgtatcgctgccgtccacc
cccaacatgaactttggaccactcagcagtccacagatgaattctatgaacagtgttagc
agctcagaggacatcaagcctccgccgggcctacagaacctgggaaacatcaactaccag
tgtacgagccccgggggaatgtcaaagcacatctgctccatttgcggggaccgctcctca
ggaaagcactacggcgtgtacagctgcgagggatgcaaaggcttcttcaagagaaccgtc
cgtaaagatcttacctacacatgtcgagacagcaaggagtgcctgattgacaagcggcag
cgaaaccgctgccaatactgtcgctaccagaagtgcctggccatgggcatgaagagagaa
ggtgtgtgtgcagcggtgcaggaagaaaggcagcgtgggaaggagcggggggagagcgag
gtggaatctaccagcagtttcaatgaggaaatgcctgtggacaagatcctggatgctgag
ctggctgtggagcccaaaacagagacgtacagtgacggcagccccagcaactcaaccaac
gaccctgtcaccaatatctgccaagcagcagacaaacagctcttcaccttggtggagtgg
gccaaacggatccctcacttctctgaactcccccttgatgaccaggtcatcctactacga
gcaggctggaacgagctccttatcgcctcattctcgcatcgctcagtcacggtaaaagat
ggcatcctgttggcgacgggcctccacgtccacagaagcagcgcccacagtgctggagtg
ggctctatctttgatagagtcctgacagagttggtatccaaaatgaaagatatgcacatg
gataagacagagctcggctgcctgcgagccatcgtcctcttcaacccagatgcaaaaggt
ctctcaaacccaccagaggttgaggggctgagggaaaaggtttacgcctcattggaatcg
tacacgaaacagaaatacccagaccagccgggcaggtttgccaagctgctactccgtctg
cccgccctgcgctccatcggcctaaagtgtctggagcacctgttcttcttcaagctgatt
ggggacacgcctatcgacaccttcctgatggagatgctggaggctccgcatcagatcaca
tga
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