Micropterus salmoides (largemouth bass): 119900892
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Entry
119900892 CDS
T07309
Symbol
si:dkey-110c1.10
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
119900892 (si:dkey-110c1.10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119900892 (si:dkey-110c1.10)
04131 Membrane trafficking [BR:
msam04131
]
119900892 (si:dkey-110c1.10)
03029 Mitochondrial biogenesis [BR:
msam03029
]
119900892 (si:dkey-110c1.10)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
msam04812
]
119900892 (si:dkey-110c1.10)
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
119900892 (si:dkey-110c1.10)
mRNA cycle factors
P-body specific factors
119900892 (si:dkey-110c1.10)
Membrane trafficking [BR:
msam04131
]
Others
Actin-binding proteins
Myosins
119900892 (si:dkey-110c1.10)
Mitochondrial biogenesis [BR:
msam03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
119900892 (si:dkey-110c1.10)
Cytoskeleton proteins [BR:
msam04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
119900892 (si:dkey-110c1.10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
AAA_22
OmpH
Myosin_N
AAA_16
Motif
Other DBs
NCBI-GeneID:
119900892
NCBI-ProteinID:
XP_038572128
LinkDB
All DBs
Position
Unknown
AA seq
1662 aa
AA seq
DB search
MASLELYSKGASVWIPDPDAVWVSALLLQDYSPGEKHLLLQLCNGKEVQYPVVSPSDLPP
LGNPNILEGENDLTALSFLHEPAVLHNLRVRFLDYSSIYTYCGIVLVAINPYDPLPIYGE
EVIDAYSGQDMADMEPHIFSVAEEAYRTMTREEKNQSIIISGESGSGKTASAKFTMRYFA
VVGGTAQQTSMEERVLASNPIMESFGNAKTTRNDNSSRFGKYIKICFGRKGDIIAANMRT
YLLEKSRVVFQASAERNYHIFYQLCASRDLPEMRSFKLDAPEHFRYTSQGGDMQIPDTDD
LSDLERTRNAFTILGVQPDQQMELFRILSAVLHLGNVNIQASGRRSDRSYINADDRSLAV
FSKLLGVEAPQMAHWLCHRRLAVGGEMLVKPISGQQAIEARDALAKHIYGQLFTWTVQRL
NSALSSQRGQAKSFIGVLDIYGFETFDRNSFEQFCINYANEKLQQQFNRHVFHLEQEEYV
REELAWNRIEFSDNQQCINLVEGQLGLFDLLDEECRMPKGSDESWVQKLYDQHLTSKPHP
HFRKPRMSNSAFIVLHFADMVQYECDGFLDKNRDTVFEELINILKASQSELVAELFQQQG
NVSSVANGGVRSGKRPTREHKLTVGFQFRQSLQMLMDTLNSTTPHYVRCIKPNDLKEPFM
FDPRRTVQQLRACGVLETIRISAAGYPSRWTYEEFFSRYRLLLRGLQSQEKAQASCRQVL
PQLIPDPDQYCFGKTKVFFRAGQVALLERLRAERLRVSAVIIQSRVRGWLARIRYSRICW
ATVTLQRYCRGALARRLALTLRYTMAALVIQKTYRMVVVRQLFLTIRQATIIIQAFTRGT
LARRRYRLLVAERAAVLLQARVRGWLARQAYRQVRAAVVFMQCCVRRRAARRELLQLKSE
ARSVERFRELNKGMEVKLMQLQLRADQEAREGATLRETLHAERETARAELEALRATIQKL
ESQKQEKPLPCPVISEKEEKERRRAEEKAAQEILQLTQELQTLQREKACFCKEREDLSAR
LLEQEKAQEECVYQAVSQASAALRAELDEERRKYQSLLREFTRLEQRYENLREMSLLTEQ
TKGHRRTDSTQSLSLEPPSPAPLSPQSLTPLSLSPFPSAFSSPEEVHRVSETSPSLERKV
SVWSAETPMDQLMERMDVAKDLAVKMEGEDLAHAYDAVRVANKFLESQLRGQRGQWEEEL
EALRCQLSQAISGCSSASQQQDLQELLEAREQECVKLRRELQELKNTVSLRRLLTQVLPS
AFTPEMVSRPSQPKPATVTGLLECRKRDEAKLIKNLITDIRVDSALSLPPGLLASVLFLC
VRQADCSGDHTQARSLCCAAVKAMKAALKQKHSNDLGMTALWLKNACLLHDLLNQYSPKQ
TLDSDDLVPLTTDLSDLIRALSDLCIQAYQQLLSITEAHLQNIIVPALLESETIPGLSGT
AVKLGTSRKRAGSDPRTVGGDAPTMATVLRELAALHTALTHQALPQTQMEQAFHQLTYII
AASALNSLLLRKDICCWSRGMQIRYNVSLLEEWLRSKGLQAGGAVATLEPLIQAVQLLQA
GKKTEADAQALVRTCTALSSQQIVKILTLYTPHSDLDERVTLNFIRTVQGLLKGRADSQP
PQLLMDVRRVFPVTFPFSPPPALHAEKLVIPDSLKISFLRRA
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atggcttcactggagctttacagcaagggagcaagtgtgtggattcctgacccggatgca
gtttgggtgtcagccctgctcctccaggattacagtcctggagagaaacatctactgcta
cagctctgtaatggaaaggaggtccagtacccagtagtgtccccctctgatctcccacca
ctgggaaaccccaacatcctggagggggaaaatgatctaacagctctcagcttcctccat
gaacctgctgtcttgcacaacctcagggttcgattcctggactacagtagcatctacacg
tactgtggcattgtgttggtagccatcaatccctatgacccgctccccatatacggagag
gaggtgatcgatgcttacagtggtcaggacatggccgacatggaacctcacatcttttct
gtggctgaggaagcctaccgcactatgaccagggaagagaaaaaccagtccatcatcatc
agtggagagtctggctcggggaaaacggcttcagccaaattcaccatgcgttactttgct
gtagttggcggaacagcacagcagaccagcatggaggagagggttctggcttccaaccct
atcatggagtcttttgggaatgccaaaaccacacgaaatgacaacagtagtcgttttggg
aagtacatcaagatctgctttggcagaaaaggggacatcattgcggcaaacatgaggacg
tatctactggagaagtcaagggttgtcttccaagcatcagcagagaggaactaccacatc
ttctaccagctgtgtgcctccagagacttgcctgaaatgagatcctttaaattggacgca
cctgagcatttccgctacaccagccagggaggagacatgcagattcctgatactgatgat
ttgtcagacctggagcgcactcgtaatgctttcaccattctgggtgtgcagcctgaccaa
cagatggagctattcaggatcctgtcagctgttctgcacctgggaaacgtcaacatccaa
gccagcgggagaaggtctgaccggagttatattaatgcagacgaccgctctctggctgtc
ttttccaagctgttaggagtggaagcacctcagatggcccactggctgtgtcatcgcaga
ctggctgtagggggagagatgctggtcaaacccatttccggtcagcaggctatagaagcc
agagatgcacttgccaaacacatctatggccagctctttacatggaccgtccagaggctc
aactctgctctgagctcccagaggggacaggctaaatcctttataggggtgctagacatc
tatgggtttgagacctttgaccggaatagttttgagcagttctgtataaattatgccaat
gaaaaactgcaacagcaattcaacaggcatgtgttccacttggagcaggaggaatatgtc
cgggaagagctggcctggaacaggattgagttcagcgacaatcagcagtgcatcaatctt
gtagagggccaactgggcctgtttgatcttttagatgaggagtgcaggatgcccaaaggt
tcagacgagagctgggtgcagaagctgtatgaccaacacctgaccagcaagccccaccct
cacttccggaaacctcgcatgtccaacagcgccttcatcgttttgcactttgctgacatg
gtgcaatatgaatgcgatggctttttagacaagaatcgagacaccgtctttgaagagctc
attaacattctcaaagcaagtcagtctgagctggtggctgagttgttccagcagcaggga
aatgtgtcctctgtggctaatggaggtgttcgctcagggaaaagacccaccagagagcat
aaactgacagtgggcttccagttccgtcagtccttacagatgctaatggacactctcaac
agcaccacgcctcactatgtccgctgtattaaacccaacgacctcaaagaaccttttatg
tttgaccctaggaggacagtccagcagttgagagcctgtggggtgctggagacaattcgc
atcagtgccgcaggttatccatccagatggacatacgaggagttcttcagcaggtaccgt
cttctgcttcgaggtcttcagagccaggagaaggcccaggcctcctgcagacaggtcctg
cctcagctcataccagacccagaccagtactgctttggaaagaccaaagtattcttccgg
gccggtcaggttgctcttctggagaggctgagagctgagagactgcgtgtttctgctgtg
atcatccagagccgggtcagaggatggctggcacggattagatactccaggatctgctgg
gctactgtcacgttacagagatactgcagaggagctctggccagacgactggccctgacc
ctgcgctacaccatggctgctttagtaatccagaagacatatcgcatggtggtggtcaga
cagttgttcctcactatccgacaggccaccatcatcattcaggccttcaccaggggcaca
ctggcgcgccgcagatacagactgttggtggcggagcgagctgctgtgttgcttcaggcg
agagtgcgtgggtggttggcgaggcaggcgtacaggcaagtacgtgcggcggtggtgttc
atgcagtgctgtgtgcgccgcagggcagccaggagagagctgctgcagctaaagagcgag
gcccgctcggtggagaggttcagagagctcaacaaaggcatggaagtcaaactgatgcag
ctgcagttgagagcagaccaggaggccagggagggtgccactttgagagagaccctgcat
gcagagcgagagaccgccagggctgagttggaggccttgagggcgacgatacagaaacta
gagagccagaaacaggagaagcctttgccctgccccgtcatcagcgagaaggaggagaag
gaaagaaggagagctgaggagaaggctgcccaggagatccttcaactcacacaagagttg
caaaccctgcagagagaaaaggcctgtttttgcaaagagagagaagatctctccgctcgc
ttgcttgaacaagaaaaagcacaagaagagtgtgtgtaccaagctgtttctcaggcaagt
gcagctctgagggcagagctggatgaggagaggaggaagtatcagagtcttctgagggag
ttcaccagactggaacagagatacgagaacctcagggagatgagtctgctcactgagcag
accaagggccacagaaggactgactccacccagagtctgagcttggagcccccctcccca
gctccactgtcaccccagtctctcaccccactctccctgtcacccttcccatctgctttc
tcttcaccggaggaggtccacagggtcagcgagacgtctccctccctggagaggaaagtc
tcagtgtggagcgccgaaacgccaatggaccagttgatggagaggatggacgtggccaaa
gacctggcagtgaagatggaaggagaggacctggcacatgcttacgatgctgtacgagtg
gccaacaagtttctggagagccagctgcgtggccagcgcggccaatgggaggaggagctg
gaggctctgaggtgccaacttagtcaagcgatctctggttgttcctctgcttcacagcaa
caggatctgcaggaactactggaggccagagagcaagagtgtgtcaaattgaggagagag
ctgcaggagcttaaaaacacagtttctctcagacgactactgacacaagttctcccatca
gctttcaccccagagatggtctcccgtccatctcaaccgaagccagcaacagtcactggt
ttgctggaatgtaggaagagagatgaagccaagctcatcaagaacctcatcacagacata
cgtgttgacagcgccctgtctctacctcctggtctgcttgccagcgtgctcttcctgtgt
gttcgtcaggccgactgcagcggagaccacactcaggctcgctcactctgttgtgctgct
gtcaaggctatgaaggcagctctgaagcagaaacatagtaacgatctaggcatgacagct
ctatggctgaaaaacgcctgtctgttgcacgacctgttgaaccagtactccccaaaacag
acccttgactcagatgatctggttccactgaccactgatctgagtgacctgatccgcgcc
ctgagtgacctctgtatccaggcctatcagcagctcctctccatcactgaagcacatcta
caaaacatcatagtccccgctctgctggagagtgagaccatcccaggtctgtctggcact
gcggtaaagttgggaacgtccagaaaacgggcaggctcagaccccaggactgtgggaggc
gatgctcccactatggcgactgtgctgagagagctggcagcccttcacactgctttgacc
catcaggctctgccccagacacagatggagcaggccttccaccagctcacctacatcatc
gctgcctccgctctcaacagcctgctgctgaggaaagatatatgctgctggagccgtggc
atgcaaatacgctataatgtgagtctgctggaggagtggctgcggagcaaaggtctgcag
gctgggggcgctgtggccacactggagcccctcatccaggcagttcagctgctgcaggct
gggaaaaagaccgaggcggacgcacaggcgcttgtccgcacctgcactgccctgtccagc
cagcagattgtgaagattctgaccctctacactccccacagtgacctggatgaaagagtc
acactgaatttcatccgtactgtgcaggggcttctcaaaggccgtgctgacagtcagcct
ccacagctcctaatggatgtgaggcgagtgttccctgtcacatttcccttctcgcctccc
cccgccctccatgctgagaagttagtcatcccagactccctcaagatttcctttctacgc
agagcctaa
DBGET
integrated database retrieval system
