Micropterus salmoides (largemouth bass): 119900978
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Entry
119900978 CDS
T07309
Symbol
si:dkey-183n20.15
Name
(RefSeq) RING-HC_RNF170 domain-containing protein
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119900978 (si:dkey-183n20.15)
Enzymes [BR:
msam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119900978 (si:dkey-183n20.15)
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119900978 (si:dkey-183n20.15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4_3
zf-RING_5
zf-C3HC4_2
zf-RING_2
TRAF3_RING
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
119900978
NCBI-ProteinID:
XP_038572281
LinkDB
All DBs
Position
Unknown
AA seq
257 aa
AA seq
DB search
MHPHHSSQSRLDHLPSEGPVGPSHPRSPRSLVRATDQSASTYMSFPKESTQSCPSTSRDW
HCPVCLQTASFPVQTNCGHLFCAPCLIAYWRHGSWLDAISCPLCRQKVSVLCNLFNESRS
DQSKEVLGEITDYNKRYSGTPRRVMDYLCDAPLLLQLLARGLGTMGGLVWLFFFRVALCC
VGTVVSISSPPLAPVSSSGNPLEADSSLCGLLGVLDDLVVVILLLICVININQRMAPESR
EHSTHATTPQGVIGSSL
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcacccccaccacagctctcagtccagactggaccatctcccctctgaaggtccagtg
ggtcctagtcaccccaggtcacccagatctctggtgcgcgcgactgatcagtcagcatca
acatatatgagcttccccaaggaatctacacagtcatgtccatccacaagccgagactgg
cactgtccggtctgcctgcagacggccagcttcccagtccagacgaactgtggccatttg
ttctgcgctccctgtctgatcgcctactggagacatgggtcctggttggatgcaatcagc
tgccctctctgcagacagaaggtcagtgtgttgtgtaatctatttaacgagagtcgatcg
gaccagtcaaaggaagttcttggggaaatcacagactacaacaaacgctattctggaacc
ccgcgaagggtaatggattacctgtgtgacgcacccctcctcctgcagttactggcccga
ggcctgggcaccatgggaggactcgtgtggctgtttttcttcagagtggccctgtgctgc
gtggggactgtggtgtccatttcctcccctcctcttgcccctgtctcctcatcaggaaac
cccttggaggcagactcctccctctgtggactgctgggggtcctggatgacctcgtggtg
gtcatcctgctccttatctgtgtcatcaacattaaccagcgaatggcaccagagagtaga
gaacactcaacacatgctacaaccccacaaggagtaattgggagttcactgtag
DBGET
integrated database retrieval system
