Micropterus salmoides (largemouth bass): 119901068
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Entry
119901068 CDS
T07309
Symbol
fip1l1a
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119901068 (fip1l1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119901068 (fip1l1a)
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
119901068 (fip1l1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
119901068
NCBI-ProteinID:
XP_038572438
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MSSPESDSEVVTLEDEDEEKMYELIYNMNTTDNKEEKDKDQIPSSSGHTPVRLKTYSERR
THTVAGNTKGLDMEAIDNIPGIPELKVNAEEKPWRKAGADLSDYFNYGFDEESWSAYCKK
QSKVRTANRKLCTKIMVQKGHTRHEEKESCSTCHSSGSSTILATRQSSVTADVIGGRPGS
STRVEGRQCLSDEGNNTQVVTEMSPEKNRITSYHLPPPSTINSLFAFTPPPSFLYRPGPP
PVSLLATFDSGHSKGSDDPSTSLKPCSLGVSSLIPRSMAFSAGVIDTAKAWECYIWQEKC
DKDRDRSRQYGHDKDSQRGRDRDRKSCSSSHNSGDERMRHRDTMERGHKHHSFDRFSGEK
EQEWRHRDKREGWQKSSCSRSSSRRRGDGGEDRDSQSGHKKAKRNRKDKETNKMFSADRE
RKLKSD
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcacctgagtcggactccgaagttgtaactttagaagatgaagacgaggaaaag
atgtatgaattgatttataacatgaacaccacagataacaaggaggaaaaagacaaggat
caaataccatccagctctggacacacacctgtgcgtctgaaaacttattctgaaaggaga
acacatacagttgctggtaatacaaagggactagatatggaggcaatcgataatattccg
ggaatcccagaactgaaggtgaatgcagaggaaaagccgtggaggaaagctggtgctgac
ctctcagattactttaactatggttttgatgaagaaagctggagcgcctactgtaagaaa
cagtcgaaagtccgcacagctaatagaaaactatgcactaaaatcatggtccagaagggg
cacactagacatgaagaaaaagagtcttgttctacttgtcattcctcaggcagctcaact
atactagctaccagacagtcaagtgttacagctgatgtgattggaggacgacctggatct
agcacacgagtggaagggcgccagtgtctcagtgatgaaggaaacaatactcaggtggtt
actgaaatgtcccccgagaagaatagaattacttcttatcatcttccccctccatcaacc
atcaattctctctttgcattcacccctccaccatctttcctttaccgaccaggacctcct
cccgtctccctgcttgctactttcgatagtggacactctaaaggctctgatgacccttca
acttcactgaagccatgttcattaggtgtgtcatccttaatcccaaggagtatggccttt
agcgctggagtgattgacactgccaaggcctgggagtgctacatatggcaggaaaaatgt
gacaaggacagagacagatccagacagtatggccatgataaagacagtcaaagaggcaga
gatagagacaggaagagctgttcctcttcacacaacagtggagacgagcgaatgagacac
agggacaccatggagcgagggcacaaacaccacagttttgacagattcagtggagaaaaa
gaacaagagtggaggcacagagacaaaagagaaggatggcaaaaatcatcatgcagcaga
agcagcagcaggagaaggggggatggtggtgaggacagagacagtcagagtgggcacaaa
aaggccaaaagaaataggaaagacaaggagaccaacaagatgttctctgctgaccgtgag
aggaaattaaaatctgactga
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