Micropterus salmoides (largemouth bass): 119901087
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Entry
119901087 CDS
T07309
Symbol
sh3rf1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msam01009
]
119901087 (sh3rf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119901087 (sh3rf1)
Enzymes [BR:
msam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119901087 (sh3rf1)
Protein phosphatases and associated proteins [BR:
msam01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119901087 (sh3rf1)
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119901087 (sh3rf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-RING_4
zf-C3HC4_4
zf-RING_11
Prok-RING_4
zf-Nse
Motif
Other DBs
NCBI-GeneID:
119901087
NCBI-ProteinID:
XP_038572474
LinkDB
All DBs
Position
Unknown
AA seq
853 aa
AA seq
DB search
MDESVLLDLLECPVCLERLDASAKVLPCQHTFCRRCLQGILGSRGELRCPECRTLVECAV
DELPSNILLVRLLDGIKQRPRRAGPGAGVSANGTSGAVARAHSSGTRDQATPGAQPQRAQ
AKSTLVRGVPQLPCAKALYNYDGKEPGDLKFSKGDIIILRRQVDENWYHGEMGGVHGFFP
TNFVQVIKSLPQPPPQCKALYDFELKDKEADKDCLPFSKDDILTVIRRVDENWAEGMLGD
KIGIFPISYVEFNSAARQLIELDKPSDSNGDSGEGASSGPQSNGAQRAGEKKNSKKRHSF
TSLTMSHKPMLAPPPQRHSMEISGPVLISSSNPTAAARIGEISGGLSCSAPSQVHICTTG
LIVTPPPSSPVTTATVFTFPSETSYTSIPVDALPPPPPPPPQSSVDGAAYSLAAGQRPSP
SISDQSGRQRPTVYVAMFPYTPRKEDELELRKGEMFLVLERCQDGWFKGTSMHTGKIGVF
PGNYMSPVSRTASGSNQPKVPMSLCTQAGRGVTIVSPSSAPIGAIVSGPDFNKPLAVCSS
AIPANSQPAAVVTAAQTATGQQPKVPLHVSSQMTVNQARNAARTAACHSQDRPTAAVTPI
QSALPVTYLPHLAVCQQPSSSPAQGCARVGVAMGCAAASLTPPNVSAASLEGDALRPVPV
NSSALNPTSNSTALACRLDVKREKKSLLKLLSSNKKKSRPSPPSSPTLEAEQAAAGEGLH
GAVGPDASPPSGSVSCLEPEPAAAVASASSSSSPSAPEATYRKSSPLDGCAPIAPPPRQP
CSSLLSQQHDARPIICERYRVVVSYPPQSEAELELKEGDIVFVHRKREDGWFKGTLQRNG
RTGLFPGSFVDSI
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtcagtattgctggatttgcttgagtgccctgtttgtttggagcgactggat
gcctcagcaaaggttctaccctgtcagcacaccttctgccgccgatgcctccaaggcatc
ctaggctcacgtggagagttgcgctgcccggagtgccggacgttggtggagtgtgctgtg
gatgaactccccagcaacatccttcttgtgcgcctgttggacggcatcaagcagaggcct
cgaagggctggtcctggggcaggagtttccgcaaatgggacatctggagccgttgccaga
gcgcacagcagtggaaccagggaccaggccaccccaggagcacaaccccagcgagctcag
gctaagagcacccttgttcggggtgtaccccagcttccctgtgccaaggcgctctacaac
tatgatggcaaggaaccgggagacctcaagttcagcaagggtgacattatcatcctgcgc
cggcaagtggacgagaactggtaccacggggagatgggtggagtccatggcttcttcccc
accaactttgtccaggtcatcaaatcgctaccacaacccccacctcagtgtaaagccctc
tatgactttgagctcaaagacaaggaggcagacaaggactgtctgccgttctccaaggac
gatatcctgactgtgatccgcagagtggatgaaaactgggcggagggaatgctgggagat
aaaattggaattttccccatctcatatgttgagttcaactcggcagctcggcagcttata
gagttggacaagccgtcagactccaatggagactcgggcgagggggcctcctcggggccc
cagagcaatggtgctcagcgggcaggggagaagaagaacagcaagaagcgacattccttc
acctctctcaccatgtcccacaaacccatgctagctcctcccccccagcgccactccatg
gagatcagcgggcccgtcctcatcagctccagcaaccccacagcagctgcccgaattgga
gagatcagtggggggctttcctgcagcgcaccttcacaggtacacatttgcacaactgga
ctaatcgtgaccccaccccctagtagtcctgttaccacagcaacagtcttcacatttccc
tcagagacgagctacacctccatccctgtggatgctctcccaccgcccccacctcctccc
ccacagtcctccgtcgatggagcagcatattcattggctgccggacagagaccctccccc
agcataagcgaccaaagtgggagacaaagacccacagtatatgtggctatgttcccttat
actccccgtaaggaggatgagctggaactgaggaagggagagatgtttctggtgctggaa
cgctgtcaggacggctggttcaagggcacctccatgcacactggcaagattggagtcttc
cctgggaactacatgagcccagtcagcaggacggcatcggggagcaaccagcccaaagtg
cccatgagtttgtgcactcaggctggcagaggagtcaccatcgtcagcccctcttctgct
cccattggggccattgtttcaggtcctgatttcaacaaacccctcgccgtgtgctccagc
gctatacctgccaactcccaacctgcagctgtggtaacagcagctcaaacagccacgggt
caacagcctaaagtccctttgcatgtcagctcccagatgactgtgaatcaggctcgcaat
gcggccaggacagctgcatgtcacagtcaggaccggcccacagcagcagtgacacccatc
cagtctgcattacctgtgacctatctcccacaccttgcagtgtgccagcagccttcctcc
agtcctgcccaaggctgtgcccgggtgggagtggcaatgggctgtgccgctgcctctctg
accccgcccaatgtcagcgctgcatcgctggagggtgatgctttgagacctgtccctgtg
aacagctctgctctcaatcccacatctaacagcacagctctggcttgccgactggacgtc
aagagagaaaagaaaagtcttctgaagctgttgtcctccaataagaagaagtctcgccct
tcaccaccctcctctcctacccttgaggcggaacaggctgctgctggagaggggctacac
ggcgccgtaggccccgacgcatcccctccctccggctctgtcagctgcctcgagcctgaa
cctgctgctgctgtcgcttctgcctcttcgtcctcctctccctcagccccagaggccaca
tatcggaagagcagtccccttgatggatgtgcacctattgctcctcctcctcggcagccg
tgctcctctctcttatctcaacaacatgacgcacggcccatcatatgtgagaggtacagg
gtggtggtgtcatatcctccccagagtgaggcggagctggaacttaaggagggcgacatt
gtgtttgttcacaggaagagggaagacggctggttcaaaggcacactgcagaggaacggc
aggaccggactgttccctggcagctttgttgacagcatctga
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integrated database retrieval system
